CX305206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_DROER (40S ribosomal protein S3a OS=Drosophila erecta GN=RpS3A PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 6.551e-14 Identity = 40/100 (40.00%), Postives = 59/100 (59.00%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD--------YSENVGVKVDRPA--DEPMPEA 446 R +M I+ + + DLK LV K + ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD + G +DRP + P+ EA Sbjct: 168 RARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEA 267
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_DROVI (40S ribosomal protein S3a OS=Drosophila virilis GN=RpS3A PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 8.555e-14 Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENV--------GVKVDRPA--DEPMPEA 446 R +M I+ + + DLK LV K + ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD G +DRP + P+ EA Sbjct: 168 RARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKTTEAVVSAEGAVIDRPEGYEPPVQEA 267
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAST (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae GN=RPS1A PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 8.555e-14 Identity = 40/86 (46.51%), Postives = 53/86 (61.63%), Query Frame = -3 Query: 192 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKVDRPADE 446 R+ + +I+ + L L K I EV +EIE AT I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E G KV DE Sbjct: 165 RKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVTGFKDE 250
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAS7 (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae (strain YJM789) GN=RPS1A PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 8.555e-14 Identity = 40/86 (46.51%), Postives = 53/86 (61.63%), Query Frame = -3 Query: 192 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKVDRPADE 446 R+ + +I+ + L L K I EV +EIE AT I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E G KV DE Sbjct: 165 RKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVTGFKDE 250
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAS6 (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae (strain AWRI1631) GN=RPS1A PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 8.555e-14 Identity = 40/86 (46.51%), Postives = 53/86 (61.63%), Query Frame = -3 Query: 192 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKVDRPADE 446 R+ + +I+ + L L K I EV +EIE AT I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E G KV DE Sbjct: 165 RKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVTGFKDE 250
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAS2 (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae (strain JAY291) GN=RPS1A PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 8.555e-14 Identity = 40/86 (46.51%), Postives = 53/86 (61.63%), Query Frame = -3 Query: 192 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKVDRPADE 446 R+ + +I+ + L L K I EV +EIE AT I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E G KV DE Sbjct: 165 RKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVTGFKDE 250
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A1_YEAS1 (40S ribosomal protein S1-A OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RPS1A PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 8.555e-14 Identity = 40/86 (46.51%), Postives = 53/86 (61.63%), Query Frame = -3 Query: 192 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKVDRPADE 446 R+ + +I+ + L L K I EV +EIE AT I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S E G KV DE Sbjct: 165 RKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVTGFKDE 250
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_DROME (40S ribosomal protein S3a OS=Drosophila melanogaster GN=RpS3A PE=1 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 1.459e-13 Identity = 37/90 (41.11%), Postives = 54/90 (60.00%), Query Frame = -3 Query: 201 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD--------YSENVGVKVDRP 446 R +M I+ + + DLK LV K + ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD + G +DRP Sbjct: 168 RARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRP 257
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A2_YEAS2 (40S ribosomal protein S1-B OS=Saccharomyces cerevisiae (strain JAY291) GN=RPS1B PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.459e-13 Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = -3 Query: 192 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKVDRPADE 446 R+ + +I+ + + L L K I EV +EIE AT I+PLQN+ +RKVK+LK PKFD+G LM +HG+ S + G KV DE Sbjct: 165 RKVISEILTREVQNSTLAQLTSKLIPEVINKEIENATKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGEGSGKEKGKKVSGFKDE 250
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_DROAN (40S ribosomal protein S3a OS=Drosophila ananassae GN=RpS3A PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.906e-13 Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD--------YSENVGVKVDRPA--DEPMPEA 446 R +M I+ + + DLK LV K + ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+HGD G +DRP + P+ EA Sbjct: 168 RARMTDIINNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSSDAVVSTEGAVIDRPEGYEPPVQEA 267 The following BLAST results are available for this feature:
BLAST of CX305206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CX305206 ID=CX305206; Name=CX305206; organism=Citrus clementina; type=EST; length=448bpback to top |