CX305206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_SCHJA (40S ribosomal protein S3a OS=Schistosoma japonicum GN=SJCHGC01275 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 4.246e-13 Identity = 37/83 (44.58%), Postives = 52/83 (62.65%), Query Frame = -3 Query: 201 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENV-GVKVDRP 446 R ++ +I+ + ++CDLK +V K I + ++ KA S IYPL FIRKVK+LK PK DL +LME+HG+ G V RP Sbjct: 166 RARLVEIIQQEVSTCDLKEVVNKLIPDSIAQDARKAASWIYPLGETFIRKVKVLKRPKADLARLMELHGESKSTAPGETVSRP 248
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_DROGR (40S ribosomal protein S3a OS=Drosophila grimshawi GN=RpS3A PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 5.545e-13 Identity = 39/100 (39.00%), Postives = 57/100 (57.00%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENV--------GVKVDRPA--DEPMPEA 446 R +M I+ + + DLK LV K + ++IEK+ IYPL +V+IRKVK+LK P+FD+ KL+E+H D G +DRP + P+ EA Sbjct: 168 RARMTDIITNEVSGVDLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHNDGGGKTTEAVVSAEGAVIDRPEGYEPPVQEA 267
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_BOMMA (40S ribosomal protein S3a OS=Bombyx mandarina PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 5.545e-13 Identity = 36/85 (42.35%), Postives = 55/85 (64.71%), Query Frame = -3 Query: 201 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSENVGVKVDRP 446 R+KM +I+ + +L+ +V K I + ++IEKA IYPL++V IRKVK+LK P+F++ KLME+HG+ G K +RP Sbjct: 168 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGGGKREAGDKSERP 252
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_SPOFR (40S ribosomal protein S3a OS=Spodoptera frugiperda PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 7.242e-13 Identity = 36/86 (41.86%), Postives = 55/86 (63.95%), Query Frame = -3 Query: 201 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE----NVGVKVDRP 446 R+KM +I+ + +L+ +V K I + ++IEKA IYPL++V IRKVK+LK P+F++ KLME+HG+ G K +RP Sbjct: 168 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGSGKRGEAGDKSERP 253
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_BOMMO (40S ribosomal protein S3a OS=Bombyx mori PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 7.242e-13 Identity = 36/93 (38.71%), Postives = 56/93 (60.22%), Query Frame = -3 Query: 168 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVGVKVDRPADEPMPEAPTE 446 R+KM +I+ + +L+ +V K I + ++IEKA IYPL++V IRKVK+LK P+F++ KLME+HG+ G D+ E P + Sbjct: 168 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHGEGGGGKGEAGDKSERPEGYEPPVQ 260
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_TAESO (40S ribosomal protein S3a OS=Taenia solium PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 9.459e-13 Identity = 34/83 (40.96%), Postives = 54/83 (65.06%), Query Frame = -3 Query: 201 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSENVGVKVDRP 446 R K+ +++ + A CDLKS+V+K I + G++ SSI+PL +RKVK+LK PK DLG+++E+H + ++ G V RP Sbjct: 164 RAKIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNEASSIFPLSGALVRKVKVLKKPKLDLGRILELHSEGKADEFGEGVPRP 246 The following BLAST results are available for this feature:
BLAST of CX305206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CX305206 ID=CX305206; Name=CX305206; organism=Citrus clementina; type=EST; length=448bpback to top |