CX305206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_EMENI (40S ribosomal protein S1 OS=Emericella nidulans GN=rps1 PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.586e-20 Identity = 50/91 (54.95%), Postives = 66/91 (72.53%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSENVGVKVDRPADEPMPEA 446 R+KM +IM +A+SC L L K I EV GREIEKAT IYPLQ+V IRKVK+LK+PKFDLG L+ +HG+ +++ G KV+R E + E+ Sbjct: 165 RKKMTEIMQREASSCSLAQLTSKLIPEVIGREIEKATQGIYPLQHVHIRKVKLLKSPKFDLGALLNLHGESTTDDKGQKVEREFKEQVLES 255
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A2_SCHPO (40S ribosomal protein S1-B OS=Schizosaccharomyces pombe GN=rps102 PE=1 SV=3) HSP 1 Score: 97.0561 bits (240), Expect = 3.586e-20 Identity = 48/79 (60.76%), Postives = 63/79 (79.75%), Query Frame = -3 Query: 210 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVGVKV 446 R+KM Q++ Q +SC ++ LV+K I EV GREIE+AT SI+PLQNV +RKVKILKAPK D KL+E+HG+ S++VG KV Sbjct: 165 RQKMFQVIQNQTSSCSMRELVQKLIPEVIGREIERATGSIFPLQNVLVRKVKILKAPKHDAQKLLELHGE-SQDVGTKV 242
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_TALSN (40S ribosomal protein S1 OS=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) GN=rps1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.684e-20 Identity = 50/91 (54.95%), Postives = 66/91 (72.53%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSENVGVKVDRPADEPMPEA 446 R+KM +I+ +AASC L L K I EV GREIEK+T IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ +++ G KV+R E + E+ Sbjct: 165 RKKMTEIIQREAASCTLSQLTTKLIPEVIGREIEKSTQGIYPLQNVHIRKVKLLKSPKFDLGALLNLHGESTTDDQGHKVEREFKETVLES 255
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_PENMQ (40S ribosomal protein S1 OS=Penicillium marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333) GN=rps1 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 4.684e-20 Identity = 50/91 (54.95%), Postives = 66/91 (72.53%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSENVGVKVDRPADEPMPEA 446 R+KM +I+ +AASC L L K I EV GREIEK+T IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ +++ G KV+R E + E+ Sbjct: 165 RKKMTEIIQREAASCTLSQLTTKLIPEVIGREIEKSTQGIYPLQNVHIRKVKLLKSPKFDLGALLNLHGESTTDDQGHKVEREFKETVLES 255
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_NECH7 (40S ribosomal protein S1 OS=Nectria haematococca (strain 77-13-4 / FGSC 9596 / MPVI) GN=RPS1 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 6.117e-20 Identity = 51/90 (56.67%), Postives = 64/90 (71.11%), Query Frame = -3 Query: 180 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SENVGVKVDRPADEPMPE 446 RRKM I+ +A+SC L L K I EV GREIEK+T IYPLQNV IRKVK+LK+PKFDLG LM +HG+ +++ G KV+R E + E Sbjct: 165 RRKMTDIIQREASSCTLTQLTSKLIPEVIGREIEKSTQGIYPLQNVHIRKVKLLKSPKFDLGALMALHGESGTDDQGQKVEREFKERVLE 254
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A1_SCHPO (40S ribosomal protein S1-A OS=Schizosaccharomyces pombe GN=rps101 PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 6.117e-20 Identity = 49/78 (62.82%), Postives = 62/78 (79.49%), Query Frame = -3 Query: 210 RKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVGVKV 443 +KM Q++ QA C +K LV+K I EV GR IEKAT++IYPLQNVF+RKVKILKAPK D KL+E+HG+ S++VG KV Sbjct: 166 QKMFQVIQNQANGCSMKELVQKLIPEVIGRAIEKATNNIYPLQNVFVRKVKILKAPKHDAQKLLELHGE-SQDVGSKV 242
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_SCLS1 (40S ribosomal protein S1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=rps1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 7.989e-20 Identity = 50/90 (55.56%), Postives = 64/90 (71.11%), Query Frame = -3 Query: 180 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSENVGVKVDRPADEPMPE 446 R+KM +I+ +A++C L L K I EV GREIEKAT IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ ++ G KV+R E + E Sbjct: 165 RKKMTEIIQREASTCTLTQLTAKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESNTDEQGQKVEREFKEKVLE 254
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_BOTFB (40S ribosomal protein S1 OS=Botryotinia fuckeliana (strain B05.10) GN=rps1 PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 7.989e-20 Identity = 50/90 (55.56%), Postives = 64/90 (71.11%), Query Frame = -3 Query: 180 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSENVGVKVDRPADEPMPE 446 R+KM +I+ +A++C L L K I EV GREIEKAT IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ ++ G KV+R E + E Sbjct: 165 RKKMTEIIQREASTCTLTQLTAKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESNTDEQGQKVEREFKEKVLE 254
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_YARLI (40S ribosomal protein S1 OS=Yarrowia lipolytica GN=RPS1 PE=3 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 1.363e-19 Identity = 47/81 (58.02%), Postives = 61/81 (75.31%), Query Frame = -3 Query: 204 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVGVKVDR 446 R+KM I+V +A++ L L K I EV GREIEKAT +IYPLQNV+IRKVK+LK PKFDLG L+ +HG +++ G KV+R Sbjct: 165 RKKMTDIVVREASNVTLAQLTAKLIPEVIGREIEKATQNIYPLQNVYIRKVKLLKQPKFDLGALLALHGGATDDNGKKVNR 245
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_SCHJY (40S ribosomal protein S1 OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=rps1 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.363e-19 Identity = 46/79 (58.23%), Postives = 61/79 (77.22%), Query Frame = -3 Query: 210 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVGVKV 446 R+KM Q++ QA C ++ LV+K I E+ GREIEKAT I+PLQNVF+RKVKILK+PK D KL+E HG+ +++VG KV Sbjct: 165 RQKMFQVIQNQATGCSMRELVQKLIPEIIGREIEKATGGIFPLQNVFVRKVKILKSPKLDAQKLLEQHGE-AQDVGTKV 242 The following BLAST results are available for this feature:
BLAST of CX305206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CX305206 ID=CX305206; Name=CX305206; organism=Citrus clementina; type=EST; length=448bpback to top |