CX305206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_MALGO (40S ribosomal protein S1 OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=RPS1 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.363e-19 Identity = 49/95 (51.58%), Postives = 67/95 (70.53%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS----ENVGVKV-DRPADEPMPEA 446 R+KM +++ +++SCDL+ V K I EV GREIEK+T IYPL++VFI KVK+LK PKFD+ KL E+HG S E+VG K+ EP+P+A Sbjct: 164 RKKMFEVIQRESSSCDLREFVAKLIPEVMGREIEKSTQGIYPLKDVFIHKVKVLKRPKFDVNKLYELHGGASVVGAEDVGTKIKSGEFKEPVPQA 258
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_MAGGR (40S ribosomal protein S1 OS=Magnaporthe grisea GN=RPS1 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.363e-19 Identity = 50/90 (55.56%), Postives = 64/90 (71.11%), Query Frame = -3 Query: 180 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSENVGVKVDRPADEPMPE 446 RRKM +I+ +A++C L+ L K I EV GREIEKAT IYPLQNV IRKVK+LK PKFDLG L+ +HG+ ++ G KV+R E + E Sbjct: 165 RRKMTEIIQREASTCTLQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQPKFDLGGLLALHGESTTDEQGQKVEREFKERVLE 254
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_PENCW (40S ribosomal protein S1 OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=rps1 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.780e-19 Identity = 48/91 (52.75%), Postives = 66/91 (72.53%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSENVGVKVDRPADEPMPEA 446 R+KM +I+ +A++C L L K I EV GREIEK+T IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ +++ G KV+R E + E+ Sbjct: 165 RKKMTEIIQREASTCTLSQLTHKLIPEVIGREIEKSTQGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESATDDKGQKVEREFKETVLES 255
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_NANOT (40S ribosomal protein S1 OS=Nannizzia otae (strain CBS 113480) GN=RPS1 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 6.763e-19 Identity = 50/91 (54.95%), Postives = 66/91 (72.53%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKVDRPADEPMPEA 446 R+KM +I+ QA+SC L L K + EV GREIEK+T IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S ++ G KV+R E + E+ Sbjct: 165 RKKMTEIIQRQASSCTLTQLT-KLVPEVIGREIEKSTQGIYPLQNVHIRKVKLLKSPKFDLGALLALHGEASTDDKGQKVEREFKEKVLES 254
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_USTMA (40S ribosomal protein S1 OS=Ustilago maydis GN=RPS1 PE=3 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 8.833e-19 Identity = 50/95 (52.63%), Postives = 66/95 (69.47%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY----SENVGVKV-DRPADEPMPEA 446 R+KM +I+ +A SCDL+ V K I EV GRE+EKAT I+PL++V++RKVK+LKAPK DL KL+EVHG +E+ GVK + EP P A Sbjct: 164 RQKMFEIVQREANSCDLREFVAKLIPEVIGREVEKATQGIFPLKDVYVRKVKVLKAPKDDLNKLLEVHGGAAIAGAEDAGVKARNTEFKEPAPLA 258
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_BABBO (40S ribosomal protein S3a OS=Babesia bovis GN=BBOV_III001480 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.968e-18 Identity = 43/76 (56.58%), Postives = 57/76 (75.00%), Query Frame = -3 Query: 219 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVG 446 RRKM ++M +A++ ++ +V+K I E G+EIEKA S++PLQNV IRK+K+LK PKFDL KLMEVH D SE G Sbjct: 165 RRKMIEVMQREASTTSMREVVKKIIPESIGKEIEKACKSVFPLQNVLIRKIKVLKKPKFDLTKLMEVHTDISEETG 240
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_PLAVI (40S ribosomal protein S3a OS=Plasmodium vivax GN=PVX_095080 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 5.725e-18 Identity = 46/79 (58.23%), Postives = 55/79 (69.62%), Query Frame = -3 Query: 210 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVGVKV 446 R+KM IM A+A+ LK LV+KFI E G+E+EK IYPLQNV IRKVKILK PK D+ KLME+H D E+ G V Sbjct: 165 RKKMVDIMNAEASKVMLKDLVKKFIPESIGKEVEKQCKKIYPLQNVLIRKVKILKRPKLDISKLMELHTDSKEDAGKNV 243
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_PLAF7 (40S ribosomal protein S3a OS=Plasmodium falciparum (isolate 3D7) GN=MAL3P7.35 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 5.725e-18 Identity = 47/80 (58.75%), Postives = 55/80 (68.75%), Query Frame = -3 Query: 207 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVGVKVD 446 R+KM IM A+A+ LK LV+KFI E G+EIEK IYPLQNV IRKVKILK PK D+ KLME+H D E G V+ Sbjct: 165 RKKMVDIMTAEASKVLLKDLVKKFIPESIGKEIEKQCKKIYPLQNVLIRKVKILKRPKLDISKLMELHTDPKEESGKNVN 244
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_PLAKH (40S ribosomal protein S3a OS=Plasmodium knowlesi (strain H) GN=PKH_081740 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 7.477e-18 Identity = 46/79 (58.23%), Postives = 55/79 (69.62%), Query Frame = -3 Query: 210 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVGVKV 446 R+KM IM A+A+ LK LV+KFI E G+E+EK IYPLQNV IRKVKILK PK D+ KLME+H D E+ G V Sbjct: 165 RKKMVDIMNAEASKVLLKDLVKKFIPESIGKEVEKQCKKIYPLQNVLIRKVKILKRPKLDISKLMELHTDSKEDAGKNV 243
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_NEMVE (40S ribosomal protein S3a OS=Nematostella vectensis GN=v1g242621 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 7.477e-18 Identity = 45/94 (47.87%), Postives = 62/94 (65.96%), Query Frame = -3 Query: 189 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS--------ENVGVKVDRPADEP 446 R+KM I+ + ++ DLK +V K I + G++IEK+ SIYPL +V IRKVK+LK PKFD+GKLME+HG+ S + G K+DR EP Sbjct: 164 RKKMVDIITREVSTNDLKEVVNKLIPDSIGKDIEKSCQSIYPLHDVHIRKVKVLKKPKFDIGKLMEMHGEASSHATTTTTDETGTKIDREGFEP 257 The following BLAST results are available for this feature:
BLAST of CX305206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CX305206 ID=CX305206; Name=CX305206; organism=Citrus clementina; type=EST; length=448bpback to top |