CX305206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_MACFA (40S ribosomal protein S3a OS=Macaca fascicularis GN=RPS3A PE=2 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 7.477e-18 Identity = 45/88 (51.14%), Postives = 61/88 (69.32%), Query Frame = -3 Query: 204 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------ENVGVKVDR 446 R+KM +IM + + DLK +V K I + G++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S + G KV+R Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 252
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_HUMAN (40S ribosomal protein S3a OS=Homo sapiens GN=RPS3A PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 7.477e-18 Identity = 45/88 (51.14%), Postives = 61/88 (69.32%), Query Frame = -3 Query: 204 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------ENVGVKVDR 446 R+KM +IM + + DLK +V K I + G++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S + G KV+R Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 252
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_FELCA (40S ribosomal protein S3a (Fragment) OS=Felis catus GN=RPS3A PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 7.477e-18 Identity = 45/88 (51.14%), Postives = 61/88 (69.32%), Query Frame = -3 Query: 204 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------ENVGVKVDR 446 R+KM +IM + + DLK +V K I + G++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S + G KV+R Sbjct: 161 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 248
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_CRYNE (40S ribosomal protein S1 OS=Cryptococcus neoformans GN=RPS1 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 7.477e-18 Identity = 46/90 (51.11%), Postives = 59/90 (65.56%), Query Frame = -3 Query: 180 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-NVGVKVDRPADEPMPE 446 R KM +IM +A DLK LV+KF+ E GREIEKA IYPL NV++RK KI+K PK D+ KL+E HG+ + N G KV + + PE Sbjct: 165 RAKMVEIMRREAEGSDLKELVQKFVPESIGREIEKAAKGIYPLHNVYVRKAKIVKTPKIDMSKLLESHGEAMDANTGSKVVKSGEFVEPE 254
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_CANTT (40S ribosomal protein S1 OS=Candida tropicalis (strain ATCC MYA-3404 / T1) GN=RPS1 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 7.477e-18 Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = -3 Query: 210 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKV 446 R+KM +IM + ++C L L K I EV GREIEK+T +I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E G KV Sbjct: 165 RKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_CANDC (40S ribosomal protein S1 OS=Candida dubliniensis (strain CD36 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=RPS1 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 7.477e-18 Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = -3 Query: 210 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKV 446 R+KM +IM + ++C L L K I EV GREIEK+T +I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E G KV Sbjct: 165 RKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_CANAW (40S ribosomal protein S1 OS=Candida albicans (strain WO-1) GN=RPS1 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 7.477e-18 Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = -3 Query: 210 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKV 446 R+KM +IM + ++C L L K I EV GREIEK+T +I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E G KV Sbjct: 165 RKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_CANAL (40S ribosomal protein S1 OS=Candida albicans GN=RPS1 PE=3 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 7.477e-18 Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = -3 Query: 210 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKV 446 R+KM +IM + ++C L L K I EV GREIEK+T +I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E G KV Sbjct: 165 RKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_CALJA (40S ribosomal protein S3a OS=Callithrix jacchus GN=RPS3A PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 7.477e-18 Identity = 45/88 (51.14%), Postives = 61/88 (69.32%), Query Frame = -3 Query: 204 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------ENVGVKVDR 446 R+KM +IM + + DLK +V K I + G++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S + G KV+R Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKIPKFELGKLMELHGEGSSSGKATGDETGAKVER 252
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_BOVIN (40S ribosomal protein S3a OS=Bos taurus GN=RPS3A PE=2 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 7.477e-18 Identity = 45/88 (51.14%), Postives = 61/88 (69.32%), Query Frame = -3 Query: 204 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------ENVGVKVDR 446 R+KM +IM + + DLK +V K I + G++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S + G KV+R Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 252 The following BLAST results are available for this feature:
BLAST of CX305206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CX305206 ID=CX305206; Name=CX305206; organism=Citrus clementina; type=EST; length=448bpback to top |