CX305206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_PICGU (40S ribosomal protein S1 OS=Pichia guilliermondii GN=RPS1 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 9.766e-18 Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = -3 Query: 210 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSENVGVKV 446 R+KM +IM + ++ L L +K I EV GREIEK+T +I+PLQNV IRKVK+LK PKFDLG LM +HG+ SE G KV Sbjct: 165 RKKMMEIMQREVSNSTLAQLTQKLIPEVIGREIEKSTQTIFPLQNVHIRKVKLLKQPKFDLGNLMSLHGEGASEEKGKKV 244
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_SALSA (40S ribosomal protein S3a OS=Salmo salar GN=rps3a PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.275e-17 Identity = 44/90 (48.89%), Postives = 61/90 (67.78%), Query Frame = -3 Query: 204 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---------YSENVGVKVDR 446 R+KM +IM + + DLK +V K I + G++IEKA SIYPL +V++RKVK+LK PKF+LGKLME+HG+ ++ G KVDR Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGSSAAKPSGDDTGAKVDR 254
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_RAT (40S ribosomal protein S3a OS=Rattus norvegicus GN=Rps3a PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 1.666e-17 Identity = 44/88 (50.00%), Postives = 60/88 (68.18%), Query Frame = -3 Query: 204 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSENVGVKVDR 446 R+KM +IM + + DLK +V K I + G++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ + G KV+R Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKTTGDETGAKVER 252
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_MOUSE (40S ribosomal protein S3a OS=Mus musculus GN=Rps3a PE=1 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 1.666e-17 Identity = 44/88 (50.00%), Postives = 60/88 (68.18%), Query Frame = -3 Query: 204 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSENVGVKVDR 446 R+KM +IM + + DLK +V K I + G++IEKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ + G KV+R Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKAAGDETGAKVER 252
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_LODEL (40S ribosomal protein S1 OS=Lodderomyces elongisporus GN=RPS1 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.666e-17 Identity = 43/79 (54.43%), Postives = 56/79 (70.89%), Query Frame = -3 Query: 210 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVGVKV 446 R+KM +I+ + ++ L L K I EV REIEK+T +I+PLQNV IRKVK+LK PKFDLG L+ +HG+ SE G KV Sbjct: 152 RKKMVEILTREVSNSTLSQLTSKLIPEVISREIEKSTQTIFPLQNVHIRKVKLLKQPKFDLGSLLALHGEASEEKGKKV 230
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_GECJA (40S ribosomal protein S3a OS=Gecko japonicus GN=RPS3A PE=2 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 1.666e-17 Identity = 44/88 (50.00%), Postives = 61/88 (69.32%), Query Frame = -3 Query: 204 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-------ENVGVKVDR 446 R+KM +IM + + DLK +V K I + G+++EKA SIYPL +VF+RKVK+LK PKF+LGKLME+HG+ S + G KV+R Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDMEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVER 252
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A2_DEBHA (40S ribosomal protein S1-B OS=Debaryomyces hansenii GN=RPS1B PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.176e-17 Identity = 47/91 (51.65%), Postives = 61/91 (67.03%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKVDRPADEPMPEA 446 R+KM +IM + ++C L L K I EV GREIEK+T +I PLQN+ IRKVK+LK PKFDLG L+ +HG+ S E G KV + + EA Sbjct: 165 RKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKSTQTILPLQNIHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKVSAGFKDVVLEA 255
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A1_DEBHA (40S ribosomal protein S1-A OS=Debaryomyces hansenii GN=RPS1A PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.841e-17 Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = -3 Query: 210 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKV 446 R+KM +IM + ++C L L K I EV GREIEK+T +I PLQN+ IRKVK+LK PKFDLG L+ +HG+ S E G KV Sbjct: 165 RKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKSTQTILPLQNIHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_XENTR (40S ribosomal protein S3a OS=Xenopus tropicalis GN=rps3a PE=2 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 3.711e-17 Identity = 43/88 (48.86%), Postives = 60/88 (68.18%), Query Frame = -3 Query: 204 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSENVGVKVDR 446 R+KM +IM + + DLK +V K I + G++IEKA SIYPL +V++RKVK+LK PKF+LGKLME+HG+ + G KV+R Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPAGDETGAKVER 252
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_TAEGU (40S ribosomal protein S3a OS=Taeniopygia guttata GN=RPS3A PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.711e-17 Identity = 43/88 (48.86%), Postives = 60/88 (68.18%), Query Frame = -3 Query: 204 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSENVGVKVDR 446 R+KM +IM + + DLK +V K I + G++IEKA SIYPL +V++RKVK+LK PKF+LGKLME+HG+ + G KV+R Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPSGDEAGTKVER 252 The following BLAST results are available for this feature:
BLAST of CX305206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CX305206 ID=CX305206; Name=CX305206; organism=Citrus clementina; type=EST; length=448bpback to top |