CX305206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_SOLSE (40S ribosomal protein S3a OS=Solea senegalensis GN=rps3a PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.711e-17 Identity = 43/90 (47.78%), Postives = 61/90 (67.78%), Query Frame = -3 Query: 204 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---------YSENVGVKVDR 446 R+KM +IM + + DLK +V K I + G++IEKA SIYPL +V++RKVK+LK PKF+LGKLME+HG+ ++ G KV+R Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGTGTATKATGDDTGAKVER 254
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_ORYLA (40S ribosomal protein S3a OS=Oryzias latipes GN=rps3a PE=2 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 3.711e-17 Identity = 43/90 (47.78%), Postives = 61/90 (67.78%), Query Frame = -3 Query: 204 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---------YSENVGVKVDR 446 R+KM +IM + + DLK +V K I + G++IEKA SIYPL +V++RKVK+LK PKF+LGKLME+HG+ ++ G KV+R Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGAGGAAKASGDDTGAKVER 254
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_TETNG (40S ribosomal protein S3a OS=Tetraodon nigroviridis GN=rps3a PE=3 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 4.847e-17 Identity = 43/90 (47.78%), Postives = 61/90 (67.78%), Query Frame = -3 Query: 204 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---------YSENVGVKVDR 446 R+KM +IM + + DLK +V K I + G++IEKA SIYPL +V++RKVK+LK PKF+LGKLME+HG+ ++ G KV+R Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGAGTAAKATGDDTGAKVER 254
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_EIMTE (40S ribosomal protein S3a OS=Eimeria tenella PE=2 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 4.847e-17 Identity = 43/88 (48.86%), Postives = 60/88 (68.18%), Query Frame = -3 Query: 204 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSENVGVKVDR 446 R+KM +IM + + DLK +V K I + G++IEKA SIYPL +V++RKVK+LK PKF+LGKLME+HG+ + G KV+R Sbjct: 165 RKKMMEIMTGEFQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPSGDEAGAKVER 252
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_PARBP (40S ribosomal protein S1 OS=Paracoccidioides brasiliensis (strain Pb03) GN=RPS1 PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 6.330e-17 Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKVDRPADEPMPEA 446 R+KM +I+ +A + L L K I EV GREIEKAT IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S ++ G KV+R E + E+ Sbjct: 165 RKKMVEIIQREAGTRSLAQLT-KLIPEVIGREIEKATHGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKETVLES 254
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_PARBD (40S ribosomal protein S1 OS=Paracoccidioides brasiliensis (strain Pb18) GN=RPS1 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 6.330e-17 Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKVDRPADEPMPEA 446 R+KM +I+ +A + L L K I EV GREIEKAT IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S ++ G KV+R E + E+ Sbjct: 165 RKKMVEIIQREAGTRSLAQLT-KLIPEVIGREIEKATHGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKETVLES 254
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_PARBA (40S ribosomal protein S1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=RPS1 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 6.330e-17 Identity = 49/91 (53.85%), Postives = 64/91 (70.33%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKVDRPADEPMPEA 446 R+KM +I+ +A + L L K I EV GREIEKAT IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S ++ G KV+R E + E+ Sbjct: 165 RKKMVEIIQREAGTRSLAQLT-KLIPEVIGREIEKATHGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKETVLES 254
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_OPHHA (40S ribosomal protein S3a OS=Ophiophagus hannah GN=RPS3A PE=2 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 6.330e-17 Identity = 43/88 (48.86%), Postives = 60/88 (68.18%), Query Frame = -3 Query: 204 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSENVGVKVDR 446 R+KM +IM + + DLK +V K I + G++IEKA SIYPL +V++RKVK+LK PKF+LGKLME+HG+ + G KV+R Sbjct: 165 RKKMVEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGSGKPSGDETGAKVER 252
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_LYSTE (40S ribosomal protein S3a OS=Lysiphlebus testaceipes PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 6.330e-17 Identity = 44/98 (44.90%), Postives = 58/98 (59.18%), Query Frame = -3 Query: 171 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE------NVGVKVDRPADEPMPEAPT 446 RRKM I+ + CDLK +V K + + ++IEKA IYPL +V+IRKVK+LK P+F+L KL+E+HGD G KVDRP P T Sbjct: 168 RRKMVSIVTDEITKCDLKGVVTKLVPDAIAKDIEKACQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGGSKTGEVGETGSKVDRPEGYEPPVQET 265
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3AA_XENLA (40S ribosomal protein S3a-A OS=Xenopus laevis GN=rps3a-A PE=2 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 6.330e-17 Identity = 43/88 (48.86%), Postives = 60/88 (68.18%), Query Frame = -3 Query: 204 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSENVGVKVDR 446 R+KM +IM + + DLK +V K I + G++IEKA SIYPL +V++RKVK+LK PKF+LGKLME+HG+ + G KV+R Sbjct: 165 RKKMFEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGTGKPAGDETGAKVER 252 The following BLAST results are available for this feature:
BLAST of CX305206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX305206 ID=CX305206; Name=CX305206; organism=Citrus clementina; type=EST; length=448bpback to top |