CX305206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_IXOSC (40S ribosomal protein S3a OS=Ixodes scapularis PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.410e-16 Identity = 46/105 (43.81%), Postives = 63/105 (60.00%), Query Frame = -3 Query: 171 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-------------NVGVKVDRPADEPMPEAPT 446 R+KM ++MV + +S +LK +V K I G++IEK+ IYPL +V IRKVK+LK PKF+LGKL+E+HG+ + GVKVDRP P T Sbjct: 165 RKKMTEMMVVEVSSSNLKDVVNKLIPGSIGKDIEKSCQHIYPLHDVLIRKVKVLKKPKFELGKLLELHGEGTSKGGAASTAAVAKGEEGVKVDRPEGYEPPVLET 269
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3AB_XENLA (40S ribosomal protein S3a-B OS=Xenopus laevis GN=rps3a-B PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.410e-16 Identity = 43/88 (48.86%), Postives = 60/88 (68.18%), Query Frame = -3 Query: 204 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-------YSENVGVKVDR 446 R+KM +IM + + DLK +V K I + G++IEKA SIYPL +V+ RKVK+LK PKF+LGKLME+HG+ ++ G KV+R Sbjct: 165 RKKMMEIMSREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVYARKVKMLKKPKFELGKLMELHGEGGGSGKPAADETGAKVER 252
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A1_PICST (40S ribosomal protein S1-A OS=Pichia stipitis GN=RPS1A PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.410e-16 Identity = 44/81 (54.32%), Postives = 57/81 (70.37%), Query Frame = -3 Query: 207 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SENVGVKVD 446 R+KM +IM + ++ L L K I EV GREIEK+T +I+PLQNV IRKVK+LK PKFDLG L+ +HG+ E G KV+ Sbjct: 165 RKKMSEIMQREVSAVTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKVLKQPKFDLGALLALHGESGGEEKGRKVN 245
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_CAEEL (40S ribosomal protein S3a OS=Caenorhabditis elegans GN=rps-1 PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 1.842e-16 Identity = 47/94 (50.00%), Postives = 60/94 (63.83%), Query Frame = -3 Query: 183 RKMRQIMVA----QAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSENVGV---KVDRPADEPMP 443 RK+R M+ + CDLK +V K I + G++IEK S +YPLQ V+IRKVKI+K PK DLG+L ++HGD S VG KVDRP D P Sbjct: 160 RKIRSEMIGCIEKEVTGCDLKEVVSKLIPDSIGKDIEKTCSKLYPLQEVYIRKVKIIKRPKVDLGRLHDLHGD-SITVGADGEKVDRPDDYEPP 252
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A2_CLAL4 (40S ribosomal protein S1-B OS=Clavispora lusitaniae (strain ATCC 42720) GN=RPS1B PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.842e-16 Identity = 45/80 (56.25%), Postives = 56/80 (70.00%), Query Frame = -3 Query: 210 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKV 446 R+KM +IM + ++ L L K I EV GREIEK+T SI PLQN+ IRKVK+LK PKFDLG L+ +HG+ S E G KV Sbjct: 165 RKKMIEIMQREVSNVTLAQLTSKLIPEVIGREIEKSTQSILPLQNIHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A1_CLAL4 (40S ribosomal protein S1-A OS=Clavispora lusitaniae (strain ATCC 42720) GN=RPS1A PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.842e-16 Identity = 45/80 (56.25%), Postives = 56/80 (70.00%), Query Frame = -3 Query: 210 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKV 446 R+KM +IM + ++ L L K I EV GREIEK+T SI PLQN+ IRKVK+LK PKFDLG L+ +HG+ S E G KV Sbjct: 165 RKKMIEIMQREVSNVTLAQLTSKLIPEVIGREIEKSTQSILPLQNIHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_UNCRE (40S ribosomal protein S1 OS=Uncinocarpus reesii (strain UAMH 1704) GN=RPS1 PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.405e-16 Identity = 47/91 (51.65%), Postives = 64/91 (70.33%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKVDRPADEPMPEA 446 R+KM +I+ +A++ L L K + EV GREIEKAT IYPLQNV IRKVK+LK PKFD+G L+ +HG+ S ++ G KV+R E + E+ Sbjct: 165 RKKMVEIIQREASTRTLTQLT-KLVPEVIGREIEKATRGIYPLQNVHIRKVKLLKQPKFDIGALLALHGESSTDDKGQKVEREFKEQVLES 254
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_AJECG (40S ribosomal protein S1 OS=Ajellomyces capsulata (strain ATCC 26029 / G186AR / H82 / RMSCC 2432) GN=RPS1 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.405e-16 Identity = 47/91 (51.65%), Postives = 65/91 (71.43%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKVDRPADEPMPEA 446 R+K+ +I+ +A++ L L K I EV GREIEK+T IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S ++ G KV+R E + E+ Sbjct: 165 RKKITEIIQREASTRTLAQLT-KLIPEVIGREIEKSTHGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKEQVLES 254
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_BRUMA (40S ribosomal protein S3a OS=Brugia malayi GN=Bm1_27225 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 5.359e-16 Identity = 43/91 (47.25%), Postives = 59/91 (64.84%), Query Frame = -3 Query: 183 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSENVGVKVDRPADEPMP 446 R KM + M + DLK + K + + G++IEKA S IYPLQ+V IRKVKILK PKF++G+LME+H D ++ G K++RP D P Sbjct: 162 RAKMVEYMQKEVQGSDLKDVCHKLVPDSIGKDIEKACSYIYPLQDVCIRKVKILKKPKFEIGRLMEMHTDVSTFTSAEGEKIERPDDYEPP 252
BLAST of CX305206 vs. ExPASy Swiss-Prot
Match: RS3A_AJECH (40S ribosomal protein S1 OS=Ajellomyces capsulata (strain H143) GN=RPS1 PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 5.359e-16 Identity = 46/91 (50.55%), Postives = 65/91 (71.43%), Query Frame = -3 Query: 177 RRKMRQIMVAQAASCDLKSLVEKFIAEVTGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-ENVGVKVDRPADEPMPEA 446 R+K+ +I+ +A++ L L K I EV GREI+K+T IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S ++ G KV+R E + E+ Sbjct: 165 RKKITEIIQREASTRTLAQLT-KLIPEVIGREIDKSTHGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESSTDDKGQKVEREFKEQVLES 254 The following BLAST results are available for this feature:
BLAST of CX305206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CX305206 ID=CX305206; Name=CX305206; organism=Citrus clementina; type=EST; length=448bpback to top |