CX306159
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306159 vs. ExPASy Swiss-Prot
Match: BURPE_ORYSJ (BURP domain-containing protein 14 OS=Oryza sativa subsp. japonica GN=BURP14 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.609e-13 Identity = 37/104 (35.58%), Postives = 57/104 (54.81%), Query Frame = 1 Query: 1 AGGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTE--VKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAY 306 A G+ +++ +T+ EC P +GE K CATS E ++DF+ LG +V A +TE G ++ +A +SV CH+ +PY V+YCH+ T R Y Sbjct: 526 APGTAMRQVVSSTVAECARPPSRGETKRCATSAEDVVDFAVEMLGDNVVARATESTAGGGGDVRLGRVAGVPAGGNVTRSVSCHQSLFPYLVYYCHSVPTVRVY 629
BLAST of CX306159 vs. ExPASy Swiss-Prot
Match: Y639_ARATH (Probable polygalacturonase non-catalytic subunit At1g60390 OS=Arabidopsis thaliana GN=At1g60390 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.020e-13 Identity = 37/97 (38.14%), Postives = 52/97 (53.61%), Query Frame = 1 Query: 19 AEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYT-IAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAY 306 A I+ + + ECE P GE K C S E MIDF+TS LG+ V +TE G+K + G+ ++V CH+ YPY ++YCH+ R Y Sbjct: 467 AGIISSAVSECERPASHGETKRCVGSAEDMIDFATSVLGRGVVVRTTENVVGSKKKVVIGKVNGINGGDVTRAVSCHQSLYPYLLYYCHSVPRVRVY 563
BLAST of CX306159 vs. ExPASy Swiss-Prot
Match: JP650_ARATH (Probable polygalacturonase non-catalytic subunit JP650 OS=Arabidopsis thaliana GN=JP650 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 7.862e-13 Identity = 38/95 (40.00%), Postives = 52/95 (54.74%), Query Frame = 1 Query: 25 IMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYT-IAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAY 306 I+ + + ECE P GE K C S E MIDF+TS LG+SV +TE G+K + G+ K+V CH+ YPY ++YCH+ R Y Sbjct: 471 IITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGRSVVLRTTENVAGSKEKVVIGKVNGINGGKLTKAVSCHQSLYPYLLYYCHSVPKVRVY 565
BLAST of CX306159 vs. ExPASy Swiss-Prot
Match: GP1_SOLLC (Polygalacturonase-1 non-catalytic subunit beta OS=Solanum lycopersicum GN=GP1 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.987e-12 Identity = 40/104 (38.46%), Postives = 53/104 (50.96%), Query Frame = 1 Query: 1 AGGSVEAEIM-QNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYT-IAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAY 306 AG + E M + + ECE GE K C S E MIDF+TS LG++V +TE KG+ G+ KSV CH+ YPY ++YCH+ R Y Sbjct: 466 AGDESQVEKMIGDALSECERAPSAGETKRCVNSAEDMIDFATSVLGRNVVVRTTEDTKGSNGNIMIGSVKGINGGKVTKSVSCHQTLYPYLLYYCHSVPKVRVY 569
BLAST of CX306159 vs. ExPASy Swiss-Prot
Match: GP3_SOLLC (Polygalacturonase non-catalytic subunit AroGP3 OS=Solanum lycopersicum GN=GP3 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.655e-12 Identity = 38/103 (36.89%), Postives = 53/103 (51.46%), Query Frame = 1 Query: 1 AGGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYT-IAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAY 306 A S A+++ + + ECE GE K C S E MIDF+TS LG++V +TE G+K G+ KSV CH+ YP ++YCH+ R Y Sbjct: 469 ANDSQVAKMIGDALSECERAPSPGETKQCVNSAEDMIDFATSVLGRNVVVRTTENTNGSKGNIMIGSIKGINGGKVTKSVSCHQTLYPSLLYYCHSVPKVRVY 571
BLAST of CX306159 vs. ExPASy Swiss-Prot
Match: GP2_SOLLC (Polygalacturonase non-catalytic subunit AroGP2 OS=Solanum lycopersicum GN=GP2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.655e-12 Identity = 38/103 (36.89%), Postives = 53/103 (51.46%), Query Frame = 1 Query: 1 AGGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYT-IAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAY 306 A S A+++ + + ECE GE K C S E MIDF+TS LG++V +TE G+K G+ KSV CH+ YP ++YCH+ R Y Sbjct: 466 ANDSQVAKMIGDALSECERAPSPGETKQCVNSAEDMIDFATSVLGRNVVVRTTENTNGSKGNIMIGSIKGINGGKVTKSVSCHQTLYPSLLYYCHSVPKVRVY 568
BLAST of CX306159 vs. ExPASy Swiss-Prot
Match: BURPA_ORYSJ (BURP domain-containing protein 10 OS=Oryza sativa subsp. japonica GN=BURP10 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.135e-11 Identity = 43/108 (39.81%), Postives = 65/108 (60.19%), Query Frame = 1 Query: 13 VEAEIMQNTIKECEDPG-IKGEQKYCATSLESMIDFSTSKLG-KSVQAISTEVKKGTKM--QTYTIAAGVKQMAADK--SVVCHKQNYPYAVFYCHATQTTRAYIVPL 318 V A+ +Q+ + CE IKGE++ CATS+ES+++F+ S LG + ++A S +V M Y + A V+ +A + +V CH +P+AVFYCHA TR Y V L Sbjct: 166 VMADGIQSALDTCEHHRPIKGEERACATSIESVVEFAMSVLGTRDLRAFSPDVPPEGIMPGNMYKVVA-VRTVAGLRGDTVTCHTMRFPFAVFYCHAINPTRVYAVVL 272
BLAST of CX306159 vs. ExPASy Swiss-Prot
Match: BURPC_ORYSJ (BURP domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=BURP12 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.634e-11 Identity = 34/92 (36.96%), Postives = 47/92 (51.09%), Query Frame = 1 Query: 34 NTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQ-TYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAY 306 +T+ ECE +GE K CATS E ++DF+ LG + ST G+ Q GV +SV CH+ +PY V+YCH+ R Y Sbjct: 475 STVAECERAPSRGETKRCATSAEDIVDFAVEMLGNDIVVRSTASTAGSGGQIRLGNVTGVDGGKVTRSVSCHQSLFPYLVYYCHSVPKVRVY 566 The following BLAST results are available for this feature:
BLAST of CX306159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306159 ID=CX306159; Name=CX306159; organism=Citrus clementina; type=EST; length=320bpback to top |