CX306159
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX306159 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.685e-31 Identity = 70/107 (65.42%), Postives = 82/107 (76.64%), Query Frame = 1 Query: 7 GSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGK-SVQAISTEV-KKGTKMQTYTI-AAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYIVPL 318 GS EAE+M+ TI+ECE + GE+KYCATSLESM+DFS SKLGK V+A+STEV KK MQ Y I AAGVK+++ DKSVVCHKQ YP+AVFYCH T Y VPL Sbjct: 232 GSEEAEMMKKTIEECEARKVSGEEKYCATSLESMVDFSVSKLGKYHVRAVSTEVAKKNAPMQKYKIAAAGVKKLSDDKSVVCHKQKYPFAVFYCHKAMMTTVYAVPL 338
BLAST of CX306159 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.867e-22 Identity = 60/110 (54.55%), Postives = 76/110 (69.09%), Query Frame = 1 Query: 7 GSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKS-VQAISTEV-KKGTKMQTYTIAAGVKQMAA----DKSVVCHKQNYPYAVFYCHATQTTRAYIVPL 318 GSVEA M T+++CE P +GE+K CATSLESM+DF+TS LG S V+A ST V K+G+ Q YT+ A VK+ AA D+ V CH + Y YAVF CH T+ TRAY V + Sbjct: 266 GSVEAAEMAQTLRDCEAPPAQGERKACATSLESMVDFATSSLGTSHVRAASTVVGKEGSPEQEYTVTA-VKRAAAGGDQDQLVACHAEPYAYAVFACHLTRATRAYAVSM 374
BLAST of CX306159 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 3.521e-21 Identity = 51/104 (49.04%), Postives = 69/104 (66.35%), Query Frame = 1 Query: 7 GSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAISTEV--KKG-TKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAY 306 GSV+A +++NT+ ECE P KGE+K CATSLESM+DF S LG + ++A ST + K G T Q YT+ + + + CH ++YPYAVF CH T+ TRAY Sbjct: 162 GSVDASVVKNTLLECELPANKGEKKACATSLESMVDFVASSLGTRDIKAASTFLVGKDGDTPAQEYTVTGARRMAETGQLIACHPESYPYAVFMCHLTEATRAY 265
BLAST of CX306159 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.643e-18 Identity = 53/108 (49.07%), Postives = 71/108 (65.74%), Query Frame = 1 Query: 7 GSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKS-VQAIST-----EVKKGTKMQTYTIAAGVKQMA-ADKSVVCHKQNYPYAVFYCHATQ-TTRAY 306 GS +A M T+++CE P KGE+K CATSLES++DF TS G S V A ST V+ + Q YT+ +GV++MA + + CH ++YPYAVF CH T+ TTRAY Sbjct: 420 GSDDAAEMSATLQDCELPANKGEKKACATSLESIVDFVTSSFGASDVDAASTVVLSKAVESSSLAQDYTV-SGVRRMAGTGQLIACHPESYPYAVFMCHLTEATTRAY 526
BLAST of CX306159 vs. ExPASy Swiss-Prot
Match: RAF1B_WHEAT (Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.887e-15 Identity = 41/108 (37.96%), Postives = 61/108 (56.48%), Query Frame = 1 Query: 1 AGGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAI-STEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYIVPL 318 A S M+ T++ CE P I GE K+CATSLE++++ + LG + ++ + ST + G +QTYT+ A V CH + YPY V+ CH T +RAY V + Sbjct: 194 ASDSTTVPSMEATLRACESPTIAGESKFCATSLEALVERAMGVLGTRDIRPVTSTLPRAGAPLQTYTVVAVQPVEGGPVFVACHDEAYPYTVYRCHTTGPSRAYTVDM 301
BLAST of CX306159 vs. ExPASy Swiss-Prot
Match: RAF1A_WHEAT (Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.431e-15 Identity = 40/108 (37.04%), Postives = 62/108 (57.41%), Query Frame = 1 Query: 1 AGGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAI-STEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYIVPL 318 A S M+ T++ CE P I GE K+CATSLE++++ + LG + ++ + ST + G +QTYT+ + V CH + YPY V+ CH T +RAY+V + Sbjct: 221 ASDSATVASMEATLRACESPTIAGESKFCATSLEALVERAMEVLGTRDIRPVTSTLPRAGAPLQTYTVRSVRPVEGGPVFVACHDEAYPYTVYRCHTTGPSRAYMVDM 328
BLAST of CX306159 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.431e-15 Identity = 49/108 (45.37%), Postives = 62/108 (57.41%), Query Frame = 1 Query: 7 GSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAISTEVKKG--TKMQTYTI-AAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYIVPL 318 GS A+ M++T+ ECE GE K CATSLESM++F+ S LG + V A+STEV + T Q Y + A ++ V CH Y YAVF CH T T AY V L Sbjct: 81 GSPAADAMRSTLAECEAAPQAGEAKRCATSLESMVEFAASSLGTRDVHAVSTEVDRAGPTPRQAYRVEAVRPVPVSGGDMVACHGMAYAYAVFGCHTT-TAAAYTVTL 187
BLAST of CX306159 vs. ExPASy Swiss-Prot
Match: BURPD_ORYSJ (BURP domain-containing protein 13 OS=Oryza sativa subsp. japonica GN=BURP13 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.444e-14 Identity = 42/108 (38.89%), Postives = 64/108 (59.26%), Query Frame = 1 Query: 1 AGGSVEAEIMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLG-KSVQAI-STEVKKGTKMQTYTIAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYIVPL 318 A + EA M+ T++ CE P + GE K+CATSLE++++ + + LG + + A+ ST + G +Q Y + A V + V CH Q YPY V+ CH T RAY+V + Sbjct: 242 APDTAEAAGMRETLRTCEWPTLAGESKFCATSLEALVEGAMAALGTRDIAALASTLPRGGAPLQAYAVRA-VLPVEGAGFVACHDQAYPYTVYRCHTTGPARAYMVEM 348
BLAST of CX306159 vs. ExPASy Swiss-Prot
Match: BURP8_ORYSJ (BURP domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=BURP8 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 9.287e-14 Identity = 48/113 (42.48%), Postives = 64/113 (56.64%), Query Frame = 1 Query: 7 GSVEAEIMQNTIKECEDP--GIKGEQKYCATSLESMIDFSTSKLG-KSVQAISTEV----KKGTKMQTYTIAA--GVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAYIVPL 318 GS AE M+ T+ ECE G + + K+C TSLESM++F+ + LG + ++A+STEV T Q YT+ A V ++ V CH Y YAVF CH T T AY V L Sbjct: 151 GSRAAEDMRTTLAECEAALLGARDQAKHCVTSLESMVEFAAASLGTRDIRAVSTEVIGTGAAETPRQEYTVEAVKPVVSVSGGNMVTCHGMPYAYAVFGCHTT-TATAYAVTL 262
BLAST of CX306159 vs. ExPASy Swiss-Prot
Match: JP630_ARATH (Probable polygalacturonase non-catalytic subunit JP630 OS=Arabidopsis thaliana GN=JP630 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 3.529e-13 Identity = 38/95 (40.00%), Postives = 52/95 (54.74%), Query Frame = 1 Query: 25 IMQNTIKECEDPGIKGEQKYCATSLESMIDFSTSKLGKSVQAISTEVKKGTKMQTYT-IAAGVKQMAADKSVVCHKQNYPYAVFYCHATQTTRAY 306 I+ + ++ECE P E K C S E MIDF+TS LG+SV +TE G+K + G+ KSV CH+ YPY ++YCH+ R Y Sbjct: 467 IITDAVRECERPPTVSETKRCVGSAEDMIDFATSVLGRSVVLRTTESVAGSKEKVMIGKVNGINGGRVTKSVSCHQSLYPYLLYYCHSVPKVRVY 561 The following BLAST results are available for this feature:
BLAST of CX306159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX306159 ID=CX306159; Name=CX306159; organism=Citrus clementina; type=EST; length=320bpback to top |