CX308694
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308694 vs. ExPASy Swiss-Prot
Match: AB32G_ARATH (ABC transporter G family member 32 OS=Arabidopsis thaliana GN=ABCG32 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.226e-13 Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = -3 Query: 182 WLSPVAWNLYGLVTCQVGDIETLVQIPDGT-SMTVKQFVKDNYDYKTSFLPVVAVVHLAWIGVFLFVFAYAIKSINFQRR 418 W +PVAW LYGL+ Q GD E V++ DG + VKQ ++D YK FL V A++ +A+ F VFA+AIK+ NFQRR Sbjct: 1341 WANPVAWTLYGLLVSQYGDDERSVKLSDGIHQVMVKQLLEDVMGYKHDFLGVSAIMVVAFCVFFSLVFAFAIKAFNFQRR 1420
BLAST of CX308694 vs. ExPASy Swiss-Prot
Match: PDR2_NICPL (Pleiotropic drug resistance protein 2 OS=Nicotiana plumbaginifolia GN=PDR2 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.567e-13 Identity = 34/80 (42.50%), Postives = 49/80 (61.25%), Query Frame = -3 Query: 182 WLSPVAWNLYGLVTCQVGDIETLVQIPDGTS-MTVKQFVKDNYDYKTSFLPVVAVVHLAWIGVFLFVFAYAIKSINFQRR 418 W SPVAW +YG+ QVGD +++ T + V +F+K+ Y FL VV H+ W+ +F FVFAY IK +N+Q+R Sbjct: 1382 WASPVAWTIYGIFASQVGDRTDELELTGETEKIQVNEFLKEYLGYDHDFLLVVVFAHVGWVLLFFFVFAYGIKFLNYQKR 1461
BLAST of CX308694 vs. ExPASy Swiss-Prot
Match: AB40G_ARATH (ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.567e-13 Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = -3 Query: 182 WLSPVAWNLYGLVTCQVGDIETLVQIPDGTSMTVKQFVKDNYDYKTSFLPVVAVVHLAWIGVFLFVFAYAIKSINFQRR 418 WL PVAW LYGL+ Q GDI + ++M+VKQF+++ Y Y+ FL VVA +++ + +F +FA IKS NFQ+R Sbjct: 1348 WLCPVAWTLYGLIASQFGDITEPMA---DSNMSVKQFIREFYGYREGFLGVVAAMNVIFPLLFAVIFAIGIKSFNFQKR 1423
BLAST of CX308694 vs. ExPASy Swiss-Prot
Match: PDR1_NICPL (Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia GN=PDR1 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.659e-13 Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = -3 Query: 182 WLSPVAWNLYGLVTCQVGDIETLVQIPDGTSMTVKQFVKDNYDYKTSFLPVVAVVHLAWIGVFLFVFAYAIKSINFQRR 418 W P+AW LYGLV Q GD++ + + TV+QF++ N+ +K FL VVA V +A+ VF F FA IK+ NFQRR Sbjct: 1361 WGCPIAWTLYGLVASQFGDLQDPLT---DQNQTVEQFLRSNFGFKHDFLGVVAAVIVAFAVVFAFTFALGIKAFNFQRR 1436
BLAST of CX308694 vs. ExPASy Swiss-Prot
Match: AB29G_ARATH (ABC transporter G family member 29 OS=Arabidopsis thaliana GN=ABCG29 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 1.038e-12 Identity = 29/80 (36.25%), Postives = 52/80 (65.00%), Query Frame = -3 Query: 182 WLSPVAWNLYGLVTCQVGDIETLVQIPD-GTSMTVKQFVKDNYDYKTSFLPVVAVVHLAWIGVFLFVFAYAIKSINFQRR 418 W+ PVAW +YGL+ Q GD+E +++P T+K +++++Y Y F+ +A V + + F F+FA+ I+++NFQ+R Sbjct: 1337 WICPVAWTVYGLIVSQYGDVEDTIKVPGMANDPTIKWYIENHYGYDADFMIPIATVLVGFTLFFAFMFAFGIRTLNFQQR 1416
BLAST of CX308694 vs. ExPASy Swiss-Prot
Match: PDR6_ORYSJ (Pleiotropic drug resistance protein 6 OS=Oryza sativa subsp. japonica GN=PDR6 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 1.355e-12 Identity = 35/80 (43.75%), Postives = 53/80 (66.25%), Query Frame = -3 Query: 182 WLSPVAWNLYGLVTCQVGDIETLVQIPDG-TSMTVKQFVKDNYDYKTSFLPVVAVVHLAWIGVFLFVFAYAIKSINFQRR 418 W +PV+W LYGL+T Q GD++ + + DG T+ T F++D++ ++ FL VVA + + +F VFA AIK +NFQRR Sbjct: 1371 WANPVSWTLYGLLTSQFGDLDQPLLLADGITTTTAVDFLRDHFGFRHDFLGVVAGMVAGFCVLFAVVFALAIKYLNFQRR 1450
BLAST of CX308694 vs. ExPASy Swiss-Prot
Match: PDR1_ORYSJ (Probable pleiotropic drug resistance protein 1 OS=Oryza sativa subsp. japonica GN=PDR1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.355e-12 Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = -3 Query: 182 WLSPVAWNLYGLVTCQVGDIETLVQIPDGTSMTVKQFVKDNYDYKTSFLPVVAVVHLAWIGVFLFVFAYAIKSINFQRR 418 W+ PVAW LYGL+ Q GDI T P + V FV++ +D+K S+L VAVV +A+ +F F+F +AI +NFQ+R Sbjct: 1394 WICPVAWTLYGLIVSQYGDIVT----PMDDGIPVNVFVENYFDFKHSWLGFVAVVIVAFTMLFAFLFGFAIMKLNFQKR 1468
BLAST of CX308694 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSJ (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. japonica GN=PDR3 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.339e-11 Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = -3 Query: 182 WLSPVAWNLYGLVTCQVGDIETLVQIPDGTSMTVKQFVKDNYDYKTSFLPVVAVVHLAWIGVFLFVFAYAIKSINFQRR 418 W PVAW LYGLV Q GDIET ++ DGT VK FV++ + +K S+L VA V A+ +F +F +AI NFQ+R Sbjct: 1383 WACPVAWTLYGLVVSQFGDIETPME--DGT--PVKVFVENYFGFKHSWLGWVATVVAAFAFLFASLFGFAIMKFNFQKR 1457
BLAST of CX308694 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSI (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. indica GN=PDR3 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.339e-11 Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = -3 Query: 182 WLSPVAWNLYGLVTCQVGDIETLVQIPDGTSMTVKQFVKDNYDYKTSFLPVVAVVHLAWIGVFLFVFAYAIKSINFQRR 418 W PVAW LYGLV Q GDIET ++ DGT VK FV++ + +K S+L VA V A+ +F +F +AI NFQ+R Sbjct: 1383 WACPVAWTLYGLVVSQFGDIETPME--DGT--PVKVFVENYFGFKHSWLGWVATVVAAFAFLFASLFGFAIMKFNFQKR 1457
BLAST of CX308694 vs. ExPASy Swiss-Prot
Match: TUR2_SPIPO (Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrrhiza GN=TUR2 PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.714e-11 Identity = 33/80 (41.25%), Postives = 51/80 (63.75%), Query Frame = -3 Query: 182 WLSPVAWNLYGLVTCQVGDI-ETLVQIPDGTSMTVKQFVKDNYDYKTSFLPVVAVVHLAWIGVFLFVFAYAIKSINFQRR 418 W PVAW LYGLV Q G+ +T+ + + TVK F++ ++ FLPVV V+ + + +F +FA++IK++NFQRR Sbjct: 1366 WACPVAWTLYGLVVSQFGEYTDTMSDVDE----TVKDFLRRFLGFRHDFLPVVGVMVVVFTVLFASIFAFSIKTLNFQRR 1441 The following BLAST results are available for this feature:
BLAST of CX308694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308694 ID=CX308694; Name=CX308694; organism=Citrus clementina; type=EST; length=420bpback to top |