CX308694
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX308694 vs. ExPASy Swiss-Prot
Match: AB34G_ARATH (ABC transporter G family member 34 OS=Arabidopsis thaliana GN=ABCG34 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.035e-20 Identity = 44/79 (55.70%), Postives = 58/79 (73.42%), Query Frame = -3 Query: 182 WLSPVAWNLYGLVTCQVGDIETLVQIPDGTSMTVKQFVKDNYDYKTSFLPVVAVVHLAWIGVFLFVFAYAIKSINFQRR 418 W SPVAW LYG++T QVGD +++V I M++K +K+ + + FLPVVAVVH+AWI +FLF FAY IK +NFQRR Sbjct: 1375 WASPVAWTLYGIITSQVGDRDSIVHITGVGDMSLKTLLKNGFGFDYDFLPVVAVVHIAWILIFLFAFAYGIKFLNFQRR 1453
BLAST of CX308694 vs. ExPASy Swiss-Prot
Match: AB39G_ARATH (ABC transporter G family member 39 OS=Arabidopsis thaliana GN=ABCG39 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.307e-20 Identity = 44/79 (55.70%), Postives = 59/79 (74.68%), Query Frame = -3 Query: 182 WLSPVAWNLYGLVTCQVGDIETLVQIPDGTSMTVKQFVKDNYDYKTSFLPVVAVVHLAWIGVFLFVFAYAIKSINFQRR 418 W +PVAW LYGL+T QVGD +++V I + +K +K+ + ++ FLPVVAVVH+AWI +FLFVFAY IK +NFQRR Sbjct: 1376 WATPVAWTLYGLITSQVGDKDSMVHISGIGDIDLKTLLKEGFGFEHDFLPVVAVVHIAWILLFLFVFAYGIKFLNFQRR 1454
BLAST of CX308694 vs. ExPASy Swiss-Prot
Match: AB36G_ARATH (ABC transporter G family member 36 OS=Arabidopsis thaliana GN=ABCG36 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.502e-16 Identity = 35/80 (43.75%), Postives = 57/80 (71.25%), Query Frame = -3 Query: 182 WLSPVAWNLYGLVTCQVGDIETLVQIPDGT-SMTVKQFVKDNYDYKTSFLPVVAVVHLAWIGVFLFVFAYAIKSINFQRR 418 W+ PVAW +YGL+ Q GD+ET +Q+ G +TVKQ+++D+Y +++ F+ VA V +A+ F F+FA+ I+++NFQ R Sbjct: 1390 WICPVAWTVYGLIVSQYGDVETRIQVLGGAPDLTVKQYIEDHYGFQSDFMGPVAAVLIAFTVFFAFIFAFCIRTLNFQTR 1469
BLAST of CX308694 vs. ExPASy Swiss-Prot
Match: AB35G_ARATH (ABC transporter G family member 35 OS=Arabidopsis thaliana GN=ABCG35 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.918e-15 Identity = 35/80 (43.75%), Postives = 55/80 (68.75%), Query Frame = -3 Query: 182 WLSPVAWNLYGLVTCQVGDIETLVQIPDGT-SMTVKQFVKDNYDYKTSFLPVVAVVHLAWIGVFLFVFAYAIKSINFQRR 418 W+ PVAW +YGL+T Q GD+ET + + G +TVKQ++KD Y +++ ++ VA V + + F F+FA+ IK++NFQ R Sbjct: 1363 WICPVAWTIYGLITSQYGDVETPIALLGGAPGLTVKQYIKDQYGFESDYMGPVAGVLVGFTVFFAFIFAFCIKTLNFQSR 1442
BLAST of CX308694 vs. ExPASy Swiss-Prot
Match: PDR4_ORYSJ (Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica GN=PDR4 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.501e-15 Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = -3 Query: 182 WLSPVAWNLYGLVTCQVGDIETLVQIPDGTSMTVKQFVKDNYDYKTSFLPVVAVVHLAWIGVFLFVFAYAIKSINFQRR 418 W+ PVAW LYGLV Q GDI+ +++ G + TV QFV D + + +FL VVAVVH+ + F F+F++AI NFQRR Sbjct: 1375 WICPVAWTLYGLVASQFGDIQHVLE---GDTRTVAQFVTDYFGFHHNFLWVVAVVHVVFAVTFAFLFSFAIMKFNFQRR 1450
BLAST of CX308694 vs. ExPASy Swiss-Prot
Match: PDR15_ORYSJ (Pleiotropic drug resistance protein 15 OS=Oryza sativa subsp. japonica GN=PDR15 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.501e-15 Identity = 33/79 (41.77%), Postives = 50/79 (63.29%), Query Frame = -3 Query: 182 WLSPVAWNLYGLVTCQVGDIETLVQIPDGTSMTVKQFVKDNYDYKTSFLPVVAVVHLAWIGVFLFVFAYAIKSINFQRR 418 WL PVAW +YGL+ Q GD+E + +P + V+ F+KD + Y F+ VVA V + F F +AY+I+++NFQ+R Sbjct: 1431 WLCPVAWTVYGLIVSQYGDVEDFITVPGQSDQQVRPFIKDYFGYDPDFMGVVAAVLAGFTVFFAFTYAYSIRTLNFQQR 1509
BLAST of CX308694 vs. ExPASy Swiss-Prot
Match: PDR1_TOBAC (Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.891e-14 Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = -3 Query: 182 WLSPVAWNLYGLVTCQVGDIETLVQIPDGTSMTVKQFVKDNYDYKTSFLPVVAVVHLAWIGVFLFVFAYAIKSINFQRR 418 W +PVAW LYGLV Q GDI+T + + TV+QF++ + +K FL VVA V A++ +F F FA+AIK+ NFQRR Sbjct: 1360 WANPVAWTLYGLVASQFGDIQTKLS----DNETVEQFLRRYFGFKHDFLGVVAAVLTAYVFMFAFTFAFAIKAFNFQRR 1434
BLAST of CX308694 vs. ExPASy Swiss-Prot
Match: PDR2_ORYSJ (Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.503e-14 Identity = 41/79 (51.90%), Postives = 55/79 (69.62%), Query Frame = -3 Query: 182 WLSPVAWNLYGLVTCQVGDIETLVQIPDGTSMTVKQFVKDNYDYKTSFLPVVAVVHLAWIGVFLFVFAYAIKSINFQRR 418 W+ PVAW LYGLV Q GDI T + DGT VK FV++ +D+K S+L VVAVV +A+ +F F+F +AI +NFQ+R Sbjct: 1390 WICPVAWTLYGLVASQFGDIMT--PMDDGTP--VKIFVENYFDFKHSWLGVVAVVIVAFTMLFAFLFGFAIMKLNFQKR 1464
BLAST of CX308694 vs. ExPASy Swiss-Prot
Match: PDR12_ORYSJ (Pleiotropic drug resistance protein 12 OS=Oryza sativa subsp. japonica GN=PDR12 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.503e-14 Identity = 31/79 (39.24%), Postives = 50/79 (63.29%), Query Frame = -3 Query: 182 WLSPVAWNLYGLVTCQVGDIETLVQIPDGTSMTVKQFVKDNYDYKTSFLPVVAVVHLAWIGVFLFVFAYAIKSINFQRR 418 WL P+AW +YGL+ Q GD+E ++ +P ++ T+ +V ++ Y F+PVVA V + + F F++A IK +NFQ R Sbjct: 1422 WLCPLAWTVYGLIVTQYGDLEQIISVPGQSNQTISYYVTHHFGYHRKFMPVVAPVLVLFAVFFAFMYAICIKKLNFQHR 1500
BLAST of CX308694 vs. ExPASy Swiss-Prot
Match: PDR5_ORYSJ (Pleiotropic drug resistance protein 5 OS=Oryza sativa subsp. japonica GN=PDR5 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 9.387e-14 Identity = 31/80 (38.75%), Postives = 50/80 (62.50%), Query Frame = -3 Query: 182 WLSPVAWNLYGLVTCQVGDIETLVQIP-DGTSMTVKQFVKDNYDYKTSFLPVVAVVHLAWIGVFLFVFAYAIKSINFQRR 418 W +PV+W +YG++ Q D + +V +P T+M VK F++ N +K FL V + H ++ +F F+F Y IK +NFQ+R Sbjct: 1375 WANPVSWTIYGVIASQFADSDRVVTVPGQSTTMVVKDFLEKNMGFKHDFLGYVVLAHFGYVIIFFFLFGYGIKCLNFQKR 1454 The following BLAST results are available for this feature:
BLAST of CX308694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX308694 ID=CX308694; Name=CX308694; organism=Citrus clementina; type=EST; length=420bpback to top |