DY259903

Overview
NameDY259903
Unique NameDY259903
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1079
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY259903 vs. ExPASy Swiss-Prot
Match: ATG8B_ARATH (Autophagy-related protein 8b OS=Arabidopsis thaliana GN=ATG8B PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 2.007e-48
Identity = 93/117 (79.49%), Postives = 105/117 (89.74%), Query Frame = 1 
Query:   76 MAKNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNIPPPTAAMMSAIYEENRDEDGFLYMTYRGENTFG 426
            M KNSFKL +PLE R AE+ RIR KYP+R+PVIVE+A +SDVP+IDKKKYLVPADLT+GQFVYVVRKRIKL  EKAIF+FVKN  PPTAA+MSAIYEE++DEDGFLYMTY GENTFG
Sbjct:    1 MEKNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQFVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117
[Close]
BLAST of DY259903 vs. ExPASy Swiss-Prot
Match: ATG8_PHYIN (Autophagy-related protein 8 OS=Phytophthora infestans GN=ATG8 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 4.471e-48
Identity = 90/114 (78.95%), Postives = 103/114 (90.35%), Query Frame = 1 
Query:   85 NSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNIPPPTAAMMSAIYEENRDEDGFLYMTYRGENTFG 426
            +SFK EHP E+RQAEA RIR KYPDRIPVI E+A++SD+P+IDKKKYLVPADLTVGQFVYV+RKRIKLSPEKAIFIF+ N+ PPTAA+MS IYEE +D DGFLY+TY GENTFG
Sbjct:    2 SSFKKEHPFEKRQAEAQRIRSKYPDRIPVICEKADRSDIPDIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFINNVLPPTAALMSNIYEEQKDVDGFLYITYSGENTFG 115
[Close]
BLAST of DY259903 vs. ExPASy Swiss-Prot
Match: ATG8_NEUCR (Autophagy-related protein 8 OS=Neurospora crassa GN=atg-8 PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 4.184e-46
Identity = 89/117 (76.07%), Postives = 102/117 (87.18%), Query Frame = 1 
Query:   82 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNIPPPTAAMMSAIYEENRDEDGFLYMTYRGENTFGIF 432
            ++ FK EHP E+R+AEA RIR KY DRIPVI E+ EKSD+  IDKKKYLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV  + PPTAA+MS+IYEE++DEDGFLY+TY GENTFG F
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYSDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFGDF 118
[Close]
BLAST of DY259903 vs. ExPASy Swiss-Prot
Match: ATG8_PODAN (Autophagy-related protein 8 OS=Podospora anserina GN=ATG8 PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 5.465e-46
Identity = 89/117 (76.07%), Postives = 102/117 (87.18%), Query Frame = 1 
Query:   82 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNIPPPTAAMMSAIYEENRDEDGFLYMTYRGENTFGIF 432
            ++ FK EHP E+R+AEA RIR KY DRIPVI E+ EKSD+  IDKKKYLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV  + PPTAA+MS+IYEE++DEDGFLY+TY GENTFG F
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFGGF 118
[Close]
BLAST of DY259903 vs. ExPASy Swiss-Prot
Match: ATG8_COLLN (Autophagy-related protein 8 OS=Colletotrichum lindemuthianum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 5.465e-46
Identity = 89/117 (76.07%), Postives = 102/117 (87.18%), Query Frame = 1 
Query:   82 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNIPPPTAAMMSAIYEENRDEDGFLYMTYRGENTFGIF 432
            ++ FK EHP E+R+AEA RIR KY DRIPVI E+ EKSD+  IDKKKYLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV  + PPTAA+MS+IYEE++DEDGFLY+TY GENTFG F
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYSDRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFGGF 118
[Close]
BLAST of DY259903 vs. ExPASy Swiss-Prot
Match: ATG8_PENCW (Autophagy-related protein 8 OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=atg8 PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 9.322e-46
Identity = 88/115 (76.52%), Postives = 101/115 (87.83%), Query Frame = 1 
Query:   82 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNIPPPTAAMMSAIYEENRDEDGFLYMTYRGENTFG 426
            ++ FK EHP E+R+AEA RIR KY DRIPVI E+ EKSD+  IDKKKYLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV  + PPTAA+MS+IYEE++DEDGFLY+TY GENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of DY259903 vs. ExPASy Swiss-Prot
Match: ATG8_NEOFI (Autophagy-related protein 8 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=atg8 PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 9.322e-46
Identity = 88/115 (76.52%), Postives = 101/115 (87.83%), Query Frame = 1 
Query:   82 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNIPPPTAAMMSAIYEENRDEDGFLYMTYRGENTFG 426
            ++ FK EHP E+R+AEA RIR KY DRIPVI E+ EKSD+  IDKKKYLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV  + PPTAA+MS+IYEE++DEDGFLY+TY GENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of DY259903 vs. ExPASy Swiss-Prot
Match: ATG8_CHAGB (Autophagy-related protein 8 OS=Chaetomium globosum GN=ATG8 PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 9.322e-46
Identity = 88/117 (75.21%), Postives = 102/117 (87.18%), Query Frame = 1 
Query:   82 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNIPPPTAAMMSAIYEENRDEDGFLYMTYRGENTFGIF 432
            ++ FK EHP E+R+AEA RIR KY DRIPVI E+ EKSD+  IDKKKYLVP+DLTVGQFVYV+RKRIKLSPEKAIFIFV  + PPTAA+MS+IYEE++DEDGFLY+TY GENTFG F
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPSDLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFGNF 118
[Close]
BLAST of DY259903 vs. ExPASy Swiss-Prot
Match: ATG8_ASPTN (Autophagy-related protein 8 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=atg8 PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 9.322e-46
Identity = 88/115 (76.52%), Postives = 101/115 (87.83%), Query Frame = 1 
Query:   82 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNIPPPTAAMMSAIYEENRDEDGFLYMTYRGENTFG 426
            ++ FK EHP E+R+AEA RIR KY DRIPVI E+ EKSD+  IDKKKYLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV  + PPTAA+MS+IYEE++DEDGFLY+TY GENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
[Close]
BLAST of DY259903 vs. ExPASy Swiss-Prot
Match: ATG8_ASPOR (Autophagy-related protein 8 OS=Aspergillus oryzae GN=atg8 PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 9.322e-46
Identity = 88/115 (76.52%), Postives = 101/115 (87.83%), Query Frame = 1 
Query:   82 KNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNIPPPTAAMMSAIYEENRDEDGFLYMTYRGENTFG 426
            ++ FK EHP E+R+AEA RIR KY DRIPVI E+ EKSD+  IDKKKYLVPADLTVGQFVYV+RKRIKLSPEKAIFIFV  + PPTAA+MS+IYEE++DEDGFLY+TY GENTFG
Sbjct:    2 RSKFKDEHPFEKRKAEAERIRQKYADRIPVICEKVEKSDIATIDKKKYLVPADLTVGQFVYVIRKRIKLSPEKAIFIFVDEVLPPTAALMSSIYEEHKDEDGFLYITYSGENTFG 116
The following BLAST results are available for this feature:
BLAST of DY259903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ATG8B_ARATH2.007e-4879.49Autophagy-related protein 8b OS=Arabidopsis thalia... [more]
ATG8_PHYIN4.471e-4878.95Autophagy-related protein 8 OS=Phytophthora infest... [more]
ATG8_NEUCR4.184e-4676.07Autophagy-related protein 8 OS=Neurospora crassa G... [more]
ATG8_PODAN5.465e-4676.07Autophagy-related protein 8 OS=Podospora anserina ... [more]
ATG8_COLLN5.465e-4676.07Autophagy-related protein 8 OS=Colletotrichum lind... [more]
ATG8_PENCW9.322e-4676.52Autophagy-related protein 8 OS=Penicillium chrysog... [more]
ATG8_NEOFI9.322e-4676.52Autophagy-related protein 8 OS=Neosartorya fischer... [more]
ATG8_CHAGB9.322e-4675.21Autophagy-related protein 8 OS=Chaetomium globosum... [more]
ATG8_ASPTN9.322e-4676.52Autophagy-related protein 8 OS=Aspergillus terreus... [more]
ATG8_ASPOR9.322e-4676.52Autophagy-related protein 8 OS=Aspergillus oryzae ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP10YJ04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY259903 ID=DY259903; Name=DY259903; organism=Citrus clementina; type=EST; length=1079bp
CGACCTTGCCTGCTTTTGTTGCTTATCAATTTTGCGATCTCAGCTACATT
TCTCTCTGAAACGGAAAGCACGCTCATGGCGAAAAATTCTTTTAAGCTAG
AACACCCCCTCGAGAGGAGGCAGGCTGAAGCTGCTCGCATCAGAGACAAG
TATCCAGACAGAATCCCAGTGATTGTGGAGAGGGCCGAAAAAAGTGATGT
ACCTGAAATTGACAAGAAGAAATATCTGGTTCCTGCTGATCTGACTGTTG
GCCAGTTTGTGTATGTGGTGCGAAAGAGGATCAAGCTCAGTCCTGAGAAG
GCTATTTTCATTTTTGTGAAAAACATTCCGCCACCCACTGCGGCAATGAT
GTCTGCCATATATGAGGAAAACAGGGATGAAGATGGCTTCCTTTACATGA
CCTACCGTGGGGAGAATACATTTGGGATCTTCTGAAGTGTGATCACGCTA
CTATCTATGTGAACAATGCTTCAAGAACTTAGGTGAAAAAGGGGTTAAGT
TGTAAATAGTTCTATGTTCCCATTAGTTTGGAATTTCTTTCAGTTAATGG
AATTATATGTACCAACCCAACAATTTGGGAACCACCAACATATCACAAAA
AAATCCATACTTCTCCCCAAGGCCATCCGCCTGCACCAAAAGAAAAAAAA
CAACAAAACCCACTCCCTCCTGCAACACTTTTGGGCATCTTTAAAGAACG
CCATCGGTTCATAAACTTTCCTGTATCAACTCGGCCCTTAATCCTTCCCA
ATTATATCCTCCTCTTTGCCGCCCCCCCTGATTCCCCCTCTTATTAGGGC
GCGTCAATACCGGGGGAAGATGACGCTCTACCCCCACCAACCCCCGCCCC
CGCGCCCCCCCAACACCACCACACCCGCCCTTCGCCCAACCCCTCCAATC
ACTACCCAACAGACACACAATACCACCCACAAACACATAACACTGAACAC
TTGTCTCTTCCACCTATTTCTTACCGCATCATCTCGCCCCTACCCCATCT
CTGTCAAACTCATTCAAGCTCCCCACTCCAACATGCGTAACAAAACATAC
TATTACTCACAAACCACCTCACAAAACTA
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