DY259903
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY259903 vs. ExPASy Swiss-Prot
Match: ATG8L_DICDI (Autophagy-related protein 8-like protein DDB_G0290491 OS=Dictyostelium discoideum GN=DDB_G0290491 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.145e-27 Identity = 59/121 (48.76%), Postives = 91/121 (75.21%), Query Frame = 1 Query: 76 MAKNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS---PEKAIFIFV-KNIPPPTAAMMSAIYEENRDEDGFLYMTYRGENTFG 426 + SFK E+ LE+R+ +++IR++Y DR+P+IVERA SDVP+I+KKK+L P+++ + F+ +RK + S +KAIF+FV KN PP++ ++S+IY+ ++DEDGFLY+ Y GENTFG Sbjct: 3 LLSKSFKQEYSLEKRKLISSKIRNRYKDRLPIIVERAANSDVPDINKKKFLAPSNMVITNFIMEIRKHLDDSDHNEQKAIFLFVNKNNLPPSSQLLSSIYDAHKDEDGFLYICYSGENTFG 123
BLAST of DY259903 vs. ExPASy Swiss-Prot
Match: ATG8H_ARATH (Autophagy-related protein 8h OS=Arabidopsis thaliana GN=ATG8H PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 3.331e-27 Identity = 56/113 (49.56%), Postives = 80/113 (70.80%), Query Frame = 1 Query: 88 SFKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNIPPPTAAMMSAIYEENRDEDGFLYMTYRGENTFG 426 SFK + + R E+ I KYPDRIPVI+E+ +D+P+++K KYLVP D+TVG F++++ KR++L P KA+F+FV N P TA+ M ++Y ++EDGFLYM Y E TFG Sbjct: 7 SFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIHMLSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119
BLAST of DY259903 vs. ExPASy Swiss-Prot
Match: MLP3C_HUMAN (Microtubule-associated proteins 1A/1B light chain 3C OS=Homo sapiens GN=MAP1LC3C PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 4.360e-19 Identity = 50/114 (43.86%), Postives = 73/114 (64.04%), Query Frame = 1 Query: 91 FKLEHPLERRQAEAARIRDKYPDRIPVIVERAEKSD-VPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNIP-PPTAAMMSAIYEENRDEDGFLYMTYRGENTFG 426 FK L RQ E A IR K+P++IPV+VER + +P +DK K+LVP +LT+ QF+ ++R R+ L +A ++ V N +A M+ IY + +DEDGF+YMTY + TFG Sbjct: 13 FKQRKSLAIRQEEVAGIRAKFPNKIPVVVERYPRETFLPPLDKTKFLVPQELTMTQFLSIIRSRMVLRATEAFYLLVNNKSLVSMSATMAEIYRDYKDEDGFVYMTYASQETFG 126
BLAST of DY259903 vs. ExPASy Swiss-Prot
Match: LGG2_CAEEL (Protein lgg-2 OS=Caenorhabditis elegans GN=lgg-2 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.403e-17 Identity = 44/115 (38.26%), Postives = 72/115 (62.61%), Query Frame = 1 Query: 88 SFKLEHPLERRQAEAARIRDKYPDRIPVIVERAE-KSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNIPPPTAAM-MSAIYEENRDEDGFLYMTYRGENTFG 426 SFK P RQ + IR + P+++PVI+ER + + +P +D+ K+LVP +TV + + +VR+R++L P++A F+ V + +M MS +Y + RD DGF+YM Y + FG Sbjct: 16 SFKERRPFHERQKDVEEIRSQQPNKVPVIIERFDGERSLPLMDRCKFLVPEHITVAELMSIVRRRLQLHPQQAFFLLVNERSMVSNSMSMSNLYSQERDPDGFVYMVYTSQPAFG 130
BLAST of DY259903 vs. ExPASy Swiss-Prot
Match: MLP3A_RAT (Microtubule-associated proteins 1A/1B light chain 3A OS=Rattus norvegicus GN=Map1lc3a PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.832e-17 Identity = 44/114 (38.60%), Postives = 73/114 (64.04%), Query Frame = 1 Query: 91 FKLEHPLERRQAEAARIRDKYPDRIPVIVERAE-KSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFV-KNIPPPTAAMMSAIYEENRDEDGFLYMTYRGENTFG 426 FK R E +IRD++P +IPVI+ER + + +P +DK K+LVP + + + V ++R+R++L+P +A F+ V ++ + ++ IYE+ +DEDGFLYM Y + TFG Sbjct: 7 FKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120
BLAST of DY259903 vs. ExPASy Swiss-Prot
Match: MLP3A_MOUSE (Microtubule-associated proteins 1A/1B light chain 3A OS=Mus musculus GN=Map1lc3a PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.832e-17 Identity = 44/114 (38.60%), Postives = 73/114 (64.04%), Query Frame = 1 Query: 91 FKLEHPLERRQAEAARIRDKYPDRIPVIVERAE-KSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFV-KNIPPPTAAMMSAIYEENRDEDGFLYMTYRGENTFG 426 FK R E +IRD++P +IPVI+ER + + +P +DK K+LVP + + + V ++R+R++L+P +A F+ V ++ + ++ IYE+ +DEDGFLYM Y + TFG Sbjct: 7 FKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120
BLAST of DY259903 vs. ExPASy Swiss-Prot
Match: MLP3A_HUMAN (Microtubule-associated proteins 1A/1B light chain 3A OS=Homo sapiens GN=MAP1LC3A PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.832e-17 Identity = 44/114 (38.60%), Postives = 73/114 (64.04%), Query Frame = 1 Query: 91 FKLEHPLERRQAEAARIRDKYPDRIPVIVERAE-KSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFV-KNIPPPTAAMMSAIYEENRDEDGFLYMTYRGENTFG 426 FK R E +IRD++P +IPVI+ER + + +P +DK K+LVP + + + V ++R+R++L+P +A F+ V ++ + ++ IYE+ +DEDGFLYM Y + TFG Sbjct: 7 FKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 120
BLAST of DY259903 vs. ExPASy Swiss-Prot
Match: MLP3B_RAT (Microtubule-associated proteins 1A/1B light chain 3B OS=Rattus norvegicus GN=Map1lc3b PE=1 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 4.081e-17 Identity = 42/118 (35.59%), Postives = 74/118 (62.71%), Query Frame = 1 Query: 79 AKNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAE-KSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNIPPPTAAM-MSAIYEENRDEDGFLYMTYRGENTFG 426 ++ +FK E+R + IR+++P +IPVI+ER + + +P +DK K+LVP + + + + ++R+R++L+ +A F+ V + + +S +YE RDEDGFLYM Y + TFG Sbjct: 3 SEKTFKQRRSFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESERDEDGFLYMVYASQETFG 120
BLAST of DY259903 vs. ExPASy Swiss-Prot
Match: MLP3B_MOUSE (Microtubule-associated proteins 1A/1B light chain 3B OS=Mus musculus GN=Map1lc3b PE=1 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 4.081e-17 Identity = 42/118 (35.59%), Postives = 74/118 (62.71%), Query Frame = 1 Query: 79 AKNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAE-KSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNIPPPTAAM-MSAIYEENRDEDGFLYMTYRGENTFG 426 ++ +FK E+R + IR+++P +IPVI+ER + + +P +DK K+LVP + + + + ++R+R++L+ +A F+ V + + +S +YE RDEDGFLYM Y + TFG Sbjct: 3 SEKTFKQRRSFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESERDEDGFLYMVYASQETFG 120
BLAST of DY259903 vs. ExPASy Swiss-Prot
Match: MLP3B_HUMAN (Microtubule-associated proteins 1A/1B light chain 3B OS=Homo sapiens GN=MAP1LC3B PE=1 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 5.330e-17 Identity = 43/123 (34.96%), Postives = 77/123 (62.60%), Query Frame = 1 Query: 79 AKNSFKLEHPLERRQAEAARIRDKYPDRIPVIVERAE-KSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNIPPPTAAM-MSAIYEENRDEDGFLYMTYRGENTFGIF*SV 441 ++ +FK E+R + IR+++P +IPVI+ER + + +P +DK K+LVP + + + + ++R+R++L+ +A F+ V + + +S +YE +DEDGFLYM Y + TFG+ SV Sbjct: 3 SEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVYASQETFGMKLSV 125 The following BLAST results are available for this feature:
BLAST of DY259903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >DY259903 ID=DY259903; Name=DY259903; organism=Citrus clementina; type=EST; length=1079bpback to top |