DY262806
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262806 vs. ExPASy Swiss-Prot
Match: ARFG_ORYSJ (Auxin response factor 7 OS=Oryza sativa subsp. japonica GN=ARF7 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.089e-41 Identity = 87/170 (51.18%), Postives = 119/170 (70.00%), Query Frame = 1 Query: 397 LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWEVQAYLSRTAPK 906 L ELWHACAGPLV++P G V YFPQGH EQ+ A+T++++D H+P + NLP +++C++ NV + A+ ++DEVYAQ+ LQP + + + + P E P K + FCKTLTASDTSTHGGFSV RR AE+ P LD + PP QEL+ARDLH EW + ++ R P+ Sbjct: 23 LYRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLF-NLPSKILCKVVNVELRAETDSDEVYAQIMLQPEADQNELTSPKP-EPHEPEKCNVHSFCKTLTASDTSTHGGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFR-HIFRGQPR 189
BLAST of DY262806 vs. ExPASy Swiss-Prot
Match: ARFB_ARATH (Auxin response factor 2 OS=Arabidopsis thaliana GN=ARF2 PE=1 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 1.422e-41 Identity = 87/170 (51.18%), Postives = 116/170 (68.24%), Query Frame = 1 Query: 397 LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWEVQAYLSRTAPK 906 L ELWHACAGPLV++P RV YFPQGH EQV A+TN+ + +P Y +LP +L+C++ NV + A+ +TDEVYAQ+TL P + +++ L P + + FCKTLTASDTSTHGGFSV RR A++ P LD S QPP QEL+A+DLH EW + ++ R P+ Sbjct: 58 LYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLY-DLPSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKEAPLPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFR-HIFRGQPR 225
BLAST of DY262806 vs. ExPASy Swiss-Prot
Match: ARFW_ORYSJ (Auxin response factor 23 OS=Oryza sativa subsp. japonica GN=ARF23 PE=1 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 3.167e-41 Identity = 91/185 (49.19%), Postives = 122/185 (65.95%), Query Frame = 1 Query: 373 GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-------FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWEVQAYLSRTAPK 906 G G L +ELW ACAGPLV++P VG +V YFPQGH EQV A+TN+ + + Y NLP +++C++ NV + A+ +TDEVYAQ+TL P S +++ + E +PS + FCKTLTASDTSTHGGFSV RR A++ P LD S QPP QEL+A+DLH VEW + ++ R P+ Sbjct: 30 GGGGGEDALFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLY-NLPWKILCEVMNVELKAEPDTDEVYAQLTLLPESKQQEDNGSTEEE--VPSAPAAGHVRPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFR-HIFRGQPR 210
BLAST of DY262806 vs. ExPASy Swiss-Prot
Match: ARFD_ORYSJ (Auxin response factor 4 OS=Oryza sativa subsp. japonica GN=ARF4 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 5.402e-41 Identity = 101/255 (39.61%), Postives = 143/255 (56.08%), Query Frame = 1 Query: 397 LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQK---DTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWEVQAYLSRTAPKASSHQGLKCGC*CQKTNCWGILFFFFGMKKNHLLLGNSPCNPPTTGMPYSGFVP*KLAHWNSNLLHLQALPTKNLFYSFF*P 1152 L ELWHACAGPLV++P VG V YFPQGH EQV A+ N+ DS + Y +LP +L+C++ NV + A+ +TDEVYAQ+ L P PE+ + + P + ++ P FCKTLTASDTSTHGGFSV RR A++ P LD + PP QEL+A+DLH ++W + ++ R P+ Q K G F F + L +G + +P S + + H A+ TK++F ++ P Sbjct: 21 LYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLY-DLPSKLLCRVLNVELKAEQDTDEVYAQVMLMP-EPEQNEMAVEKTTPTSGPVQARPPVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFR-HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVP-SSVISSQSMHLGVLATAWHAINTKSMFTVYYKP 271
BLAST of DY262806 vs. ExPASy Swiss-Prot
Match: ARFW_ORYSI (Auxin response factor 23 OS=Oryza sativa subsp. indica GN=ARF23 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.572e-40 Identity = 90/185 (48.65%), Postives = 121/185 (65.41%), Query Frame = 1 Query: 373 GHEGDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNY-------FCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWEVQAYLSRTAPK 906 G G L +ELW ACAGPLV++P VG +V YFPQGH EQV A+TN+ + + Y NLP +++C++ NV + A+ +TDEVYAQ+TL P +++ + E +PS + FCKTLTASDTSTHGGFSV RR A++ P LD S QPP QEL+A+DLH VEW + ++ R P+ Sbjct: 30 GGGGGEDALFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLY-NLPWKILCEVMNVELKAEPDTDEVYAQLTLLPELKQQEDNGSTEEE--VPSAPAAGHVRPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFR-HIFRGQPR 210
BLAST of DY262806 vs. ExPASy Swiss-Prot
Match: ARFA_ARATH (Auxin response factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2) HSP 1 Score: 167.162 bits (422), Expect = 2.053e-40 Identity = 86/168 (51.19%), Postives = 115/168 (68.45%), Query Frame = 1 Query: 406 ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQP-LSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWEVQAYLSRTAPK 906 ELWHACAGPLV+LP G RV YFP+GH EQ+ A+ ++ ++ +P++ NLP +++C++ N+ A+ ETDEVYAQ+TL P L E P++ P K + FCKTLTASDTSTHGGFSV RR A+ P LD S QPP QEL+A DLH+ EW + ++ R P+ Sbjct: 22 ELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSF-NLPSKILCKVINIQRRAEPETDEVYAQITLLPELDQSEPTSPDAPVQE--PEKCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFR-HIFRGQPR 185
BLAST of DY262806 vs. ExPASy Swiss-Prot
Match: ARFK_ARATH (Auxin response factor 11 OS=Arabidopsis thaliana GN=ARF11 PE=2 SV=3) HSP 1 Score: 166.777 bits (421), Expect = 2.681e-40 Identity = 89/171 (52.05%), Postives = 117/171 (68.42%), Query Frame = 1 Query: 397 LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEV-DSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWEVQAYLSRTAPK 906 L +ELW ACAGPLV +P G RV YFPQGH EQ+ A+TN+ V D IP + NLPP+++C++ +VT+ A+ ETDEVYAQ+TLQP + + + P L P+K + F K LTASDTSTHGGFSV R+ A + PSLD + P QEL+ARDLH EW + ++ R P+ Sbjct: 39 LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVF-NLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDP-PLVEPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFK-HIFRGQPR 206
BLAST of DY262806 vs. ExPASy Swiss-Prot
Match: ARFD_ARATH (Auxin response factor 4 OS=Arabidopsis thaliana GN=ARF4 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 3.502e-40 Identity = 124/311 (39.87%), Postives = 159/311 (51.13%), Query Frame = 1 Query: 349 STSGLCQQGHE------GDNKCLNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSP--------EEQKDTFVPIELGIPS--KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWEVQAYLSRTAPKASSHQGLKCGC*CQKTNCWGILFFFFGMKKNHLLLGNSPCNPPTTGMPYSGFVP*KLAHWN--SNLLHL--QALPTKNLFYSFF*PPGAIPPKFFKHPPQKYSKQFFSP 1221 S+S C G G + SELWHACAGPL LP G VVYFPQGH EQ A + IP + +L PQ++C++ NV + A+ +TDEVY Q+TL PL +E K+ E S K+ + FCKTLTASDTSTHGGFSVPRRAAE F LD+ Q P+QELIA+DLH VEW+ + ++ R P+ QK G F + L LG P G+P S + N SN+L L A+ TK++F+ F+ P F P +KY SP Sbjct: 40 SSSSSCSSGSSSSSSSTGSASSIYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQDAMVSYSS-PLEIPKF-DLNPQIVCRVVNVQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFR-HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDS------IIEKNSCSNILSLVANAVSTKSMFHVFYSPRATHAE--FVIPYEKYITSIRSP 339
BLAST of DY262806 vs. ExPASy Swiss-Prot
Match: ARFR_ARATH (Auxin response factor 18 OS=Arabidopsis thaliana GN=ARF18 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.126e-38 Identity = 83/170 (48.82%), Postives = 114/170 (67.06%), Query Frame = 1 Query: 397 LNSELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEEQKDTFVPIELGIPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWEVQAYLSRTAPK 906 L +ELW CAGPLV +P RV YFPQGH EQ+ A+TN+ ++S +LPP+++C++ +VT+ A+ ETDEVYAQ+TLQP + + + P +G P+KQ + F K LTASDTSTHGGFSV R+ A + PSLD + P QEL+ RDLH EW + ++ R P+ Sbjct: 22 LYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLPPKILCRVLDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVG-PTKQEFHSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFK-HIFRGQPR 189
BLAST of DY262806 vs. ExPASy Swiss-Prot
Match: ARFX_ORYSJ (Auxin response factor 24 OS=Oryza sativa subsp. japonica GN=ARF24 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 9.536e-38 Identity = 86/179 (48.04%), Postives = 113/179 (63.13%), Query Frame = 1 Query: 406 ELWHACAGPLVSLPTVGTRVVYFPQGHSEQVAATTNKEVDSHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPEE---------QKDTFVPIELGIPS---KQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPSLDFSLQPPAQELIARDLHDVEWEVQAYLSRTAPK 906 ELW ACAGPLV++P VG RV Y PQGH EQV A+TN+ + NLP ++ C++ NV + A+ +TDEVYAQ+TL P ++ KD E+ P+ + + FCKTLTASDTSTHGGFSV RR A++ P LD S PP QEL+A+DLH VEW + ++ R P+ Sbjct: 32 ELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKQQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFR-HIFRGQPR 209 The following BLAST results are available for this feature:
BLAST of DY262806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262806 ID=DY262806; Name=DY262806; organism=Citrus clementina; type=EST; length=1332bpback to top |