DY262816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCB2_DICDI (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Dictyostelium discoideum GN=scsB PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 4.324e-43 Identity = 110/288 (38.19%), Postives = 154/288 (53.47%), Query Frame = 1 Query: 256 QLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTF-KSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLVXXXXXXXXXXXXXXRQKENWLCVNQXXXXXXXXXXXXXXXXXXXXXXN-GWMVKGAGIIRAKME 1110 Q+R LN+HEYQ LM KYG+N K V + KA + + ELVVK+Q+ AGGRG G+F ++G KGGVH+ K +E E L +MLG+ LVTKQT +G V V L E + E+YFAI++DRK GP++I +GG IE +AE+ P++I K PID+ GI E + + L A +Q++ LY+LF +SD T +E +P AET+ Q++ RQKE + + N G MV GAG+ A M+ Sbjct: 23 QVRYLNLHEYQSKSLMDKYGVNTQKWRVVTKASDAIKAASEL---NGELVVKAQVHAGGRGKGSFIETGFKGGVHLCKTGKEAERLCDEMLGKHLVTKQTTKEGTKVQSVMLAESVDPKRELYFAIVMDRKYGGPVMIASPQGGVDIESVAEETPDLIFKEPIDIVKGIRPEQTKNLAEKLGFTGEKAKIAQQQMENLYQLFIKSDATQVEINPFAETTDGQVICMDAKINFDDNASFRQKEIFEMRDTAEEDPREVEAGKFGLNYIGLDGNIGCMVNGAGLAMATMD 307
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCB_NEOFR (Succinyl-CoA ligase [GDP-forming] subunit beta, hydrogenosomal OS=Neocallimastix frontalis GN=SCSB PE=2 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 7.241e-43 Identity = 94/229 (41.05%), Postives = 142/229 (62.01%), Query Frame = 1 Query: 247 QQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDE---DAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 Q Q R L++HEY L+ +Y +N PKG+ + +E +A + + ++LV+K+Q+LAGGRG G F SGL+GGV + E+V+D A KMLG L+TKQTG G+ + VY+ E+ E YFAI+LDR T GP+++ S+GG IE++A+ P+ I+ VP + G+T E D AK + G K + A + KLYK+F E D T++E +P+AE + ++V Sbjct: 21 QTAQKRFLSVHEYCSMNLLHEYNVNAPKGIVAKTPEEAYQAAKKL--NTEDLVIKAQVLAGGRGKGHFDSGLQGGVKLCYTPEQVKDYASKMLGHKLITKQTGAAGRDCNAVYVVERQYAAREYYFAILLDRATRGPVLVASSEGGVEIEEVAKTNPDAILTVPFSIKTGLTREVALDTAKKM-GFTEKCVPQ--AADTFMKLYKIFIEKDATMVEINPMAENNRGEVV 244 HSP 2 Score: 28.1054 bits (61), Expect = 7.241e-43 Identity = 15/22 (68.18%), Postives = 17/22 (77.27%), Query Frame = 3 Query: 981 ALREPTQEDPREVAA-GKADLN 1043 ALR+ TQEDPREVA K +LN Sbjct: 265 ALRDTTQEDPREVAGHAKWNLN 286
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCB2_PIG (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial (Fragment) OS=Sus scrofa GN=SUCLG2 PE=1 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 2.803e-42 Identity = 105/265 (39.62%), Postives = 148/265 (55.85%), Query Frame = 1 Query: 193 RGLLNKLVSRSLTVAGQWQQQQL---RRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVE-DLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLVXXXXXXXXXXXXXXRQKE 975 R LL L R +A + Q QL R LN+ EYQ +LM+ G+ V + + +E +A + + KE+V+K+QILAGGRG G F SGLKGGVH+ K EV LA +M+G L TKQT +G V+KV + E L + E Y AI++DR GP+++G +GG IE++A P +I K ID+ GI D A ++ + L +N A +Q+KKLY LF + D T +E +P ET Q+V RQK+ Sbjct: 11 RKLLRDLAFRPPLLAARSQVVQLTPRRWLNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRL--NAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPEVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEGIKDSQAQRMAENLGFLGPLQNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKD 273
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCB2_BOVIN (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Bos taurus GN=SUCLG2 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 2.803e-42 Identity = 105/265 (39.62%), Postives = 148/265 (55.85%), Query Frame = 1 Query: 193 RGLLNKLVSRSLTVAGQWQQQQL---RRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVE-DLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLVXXXXXXXXXXXXXXRQKE 975 R LL LV R +A + Q QL R LN+ EYQ +LM+ G+ V + + +E +A + + KE+V+K+QILAGGRG G F SGLKGGVH+ K +V LA +M+G L TKQT +G V KV + E L + E Y AI++DR GP+++G +GG IE++A P +I K ID+ GI D A ++ + L +N A +Q+KKLY LF + D T +E +P ET Q+V RQK+ Sbjct: 10 RKLLRDLVLRPPLLAARSQVVQLTSRRWLNLQEYQSKKLMSDNGVKVQRFFVADTANEALEAAKRL--NAKEIVLKAQILAGGRGKGVFSSGLKGGVHLTKDPKVVGQLAKQMIGYNLATKQTPKEGVKVKKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIIEGIKDSQAQRMAENLGFLGPLKNQAADQIKKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKD 272
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCB2_MOUSE (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Mus musculus GN=Suclg2 PE=2 SV=3) HSP 1 Score: 171.014 bits (432), Expect = 1.391e-41 Identity = 96/239 (40.17%), Postives = 140/239 (58.58%), Query Frame = 1 Query: 262 RRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVE-DLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLVXXXXXXXXXXXXXXRQKE 975 R LN+ EYQ +LM+++G+ V + + E +A + + KE+V+K+QILAGGRG G F SGLKGGVH+ K +V +LA +M+G L TKQT +G V+KV + E L + E Y AI++DR GP+I+G +GG IE++A P +I K ID+F GI D A ++ + L + +N A +Q+ KLY LF + D T +E +P ET Q+V RQK+ Sbjct: 37 RWLNLQEYQSKKLMSEHGVRVQRFFVANTAKEALEAAKRL--NAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPKVVGELAQQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSHNGPVIVGSPQGGVDIEEVAASSPELIFKEQIDIFEGIKDSQAQRMAENLGFLGSLKNQAADQITKLYHLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKD 273
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCB2_HUMAN (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Homo sapiens GN=SUCLG2 PE=1 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 1.177e-40 Identity = 102/263 (38.78%), Postives = 145/263 (55.13%), Query Frame = 1 Query: 199 LLNKLVSRSLTVAGQWQQQQL---RRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVE-DLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLVXXXXXXXXXXXXXXRQKE 975 LL L R +A Q QL R LN+ EYQ +LM+ G+ V + + +E +A + + KE+V+K+QILAGGRG G F SGLKGGVH+ K V LA +M+G L TKQT +G V+KV + E L + E Y AI++DR GP+++G +GG IE++A P +I K ID+F GI D A ++ + L ++ A +Q+ KLY LF + D T +E +P ET Q+V RQK+ Sbjct: 12 LLRALALRPRFLAAGSQAVQLTSRRWLNLQEYQSKKLMSDNGVRVQRFFVADTANEALEAAKRL--NAKEIVLKAQILAGGRGKGVFNSGLKGGVHLTKDPNVVGQLAKQMIGYNLATKQTPKEGVKVNKVMVAEALDISRETYLAILMDRSCNGPVLVGSPQGGVDIEEVAASNPELIFKEQIDIFEGIKDSQAQRMAENLGFVGPLKSQAADQITKLYNLFLKIDATQVEVNPFGETPEGQVVCFDAKINFDDNAEFRQKD 272
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCB_YEAST (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=LSC2 PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 2.447e-40 Identity = 86/217 (39.63%), Postives = 137/217 (63.13%), Query Frame = 1 Query: 253 QQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAE 900 Q R L+IHEY+ A+L+ +YGI P+G + +E +A + + +LV+K+Q L GGRG G F +G K GVH+++ ++ ED+A +ML L+TKQTG GK VS VY+ +++ +E Y +I++DR+T P+II S+GG +IE++AE+ P+ I K I+ G++ + A V L +++A + V LYK+F E D T +E +PL+E Sbjct: 26 QARRHLSIHEYRSAQLLREYGIGTPEGFPAFTPEEAFEAAKKL--NTNKLVIKAQALTGGRGKGHFDTGYKSGVHMIESPQQAEDVAKEMLNHNLITKQTGIAGKPVSAVYIVKRVDTKHEAYLSILMDRQTKKPMIIASSQGGMNIEEVAERTPDAIKKFSIETSKGLSPQMAKDVAKSLGFSPDAQDEAAKAVSNLYKIFMERDATQVEINPLSE 240 HSP 2 Score: 26.9498 bits (58), Expect = 2.447e-40 Identity = 15/31 (48.39%), Postives = 19/31 (61.29%), Query Frame = 3 Query: 969 ERKLALREPTQEDPREVAAGKADLNTWAGKG 1061 E+ + R+ +QEDP EV A K DLN KG Sbjct: 267 EKIYSWRDLSQEDPDEVKAKKYDLNFVKLKG 297
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_OPITP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Opitutus terrae (strain DSM 11246 / PB90-1) GN=sucC PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.498e-39 Identity = 90/218 (41.28%), Postives = 127/218 (58.26%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQL 918 +NIHEYQ L K+G+ VPKG + +E A+ P+ +VVKSQI AGGRG GTF G KGGV + K K E + AGKMLG LVT QTGP G+ V +Y + E Y AI+LDR T+ P+I+ ++GG IE +A P+ I KV +D G+ D ++V L A+ +A + ++ LY+ F E+D +++E +PL T Q+ Sbjct: 1 MNIHEYQAKALFEKFGVLVPKGAPAKTPEEFVTALAQ-LPEGM-IVVKSQIHAGGRGKGTFTDGFKGGVKVCKSKAEAREAAGKMLGNTLVTAQTGPAGRKVQTIYFNVGSQIKKEYYLAILLDRATSRPVIVASTEGGMEIEKVAHDTPDRIFKVHVDPAYGLADFQVRELVFKLGFTAAEGKNASKLIRALYRCFWENDASMVEVNPLITTPDGQV 216 HSP 2 Score: 26.1794 bits (56), Expect = 4.498e-39 Identity = 10/20 (50.00%), Postives = 15/20 (75.00%), Query Frame = 3 Query: 984 LREPTQEDPREVAAGKADLN 1043 LR+ +EDP+E+ A K +LN Sbjct: 239 LRDLNEEDPKEIEASKHELN 258
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCB_SCHPO (Probable succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=SPCC1620.08 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.102e-38 Identity = 86/223 (38.57%), Postives = 137/223 (61.43%), Query Frame = 1 Query: 256 QLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVH-IVKKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 Q R L +HEY +++ K+G++VP+G S +E +K +D +LVVK+Q+LAGGRG G F SGL+GGV + E A +M+G L+T+QTGP GKI + VY+CE+ + E YFAI++DR+ P+I+ +GG IE +A + P+ I+K + + A ++VD L + + A++ + KLYK+F + D T +E +PLAET+ +++ Sbjct: 19 QKRNLALHEYISHDILRKFGVDVPRGAPARSGEEAEKVARDL--KVTDLVVKAQVLAGGRGKGQFDSGLRGGVRPVYDATEARMFAEQMIGHKLITRQTGPAGKICNVVYVCERKFIRKEYYFAILMDRENQCPMIVASDQGGVDIETVAAENPSAIIKRSLPNSPNLDPHIAEELVDKLGFSSSSKPKAVDAIVKLYKVFNDCDATQVEINPLAETTDHKVL 239
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCB1_CAEEL (Probable succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Caenorhabditis elegans GN=F47B10.1 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 4.188e-38 Identity = 96/237 (40.51%), Postives = 143/237 (60.34%), Query Frame = 1 Query: 199 LLNKLVSRSLTVAGQWQQQQLRRLNIHEYQGAELMAKYGINVPK-GLAVASVDEVKKAIQDAFP-DHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAE 900 ++ ++ L + ++ R L +HE+ G +++ Y I VP G+A + + A +A K+ VVK+Q+LAGGRG G F SGL+GGV IV +EV+ AG M+G L+TKQT +GK +V +C++L E YF+I LDR T GPI+I S+GG +IE++A P+ IVK+PIDV GIT E A ++ + A E ++KLY++F SD TL+E +P+AE Sbjct: 1 MIGRISQPLLNTSQKFMAPAARTLMLHEHHGMKILQNYEIKVPPFGVA----QDAETAFSEAKRIGGKDYVVKAQVLAGGRGKGRFSSGLQGGVQIVFTPDEVKQKAGMMIGANLITKQTDHRGKKCEEVMVCKRLFTRREYYFSITLDRNTNGPIVIASSQGGVNIEEVAATNPDAIVKMPIDVNVGITKELAHEIAVKMGFSKDCEQQASEIIEKLYQMFKGSDATLVEINPMAE 233 The following BLAST results are available for this feature:
BLAST of DY262816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262816 ID=DY262816; Name=DY262816; organism=Citrus clementina; type=EST; length=1311bpback to top |