DY262816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCB_ARATH (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Arabidopsis thaliana GN=At2g20420 PE=1 SV=1) HSP 1 Score: 408.297 bits (1048), Expect = 3.431e-118 Identity = 201/262 (76.72%), Postives = 232/262 (88.55%), Query Frame = 1 Query: 190 VRGLLNKLVSRSLTVAGQWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLVXXXXXXXXXXXXXXRQKE 975 +RGL+NKLVSRSL+++G+WQ QQLRRLNIHEYQGAELM KYG+NVPKG+A +S++EVKKAIQD FP+ ELVVKSQILAGGRGLGTFKSGLKGGVHIVK++E E++AGKMLGQ+LVTKQTGPQGK+VSKVYLCEKLSLVNEMYF+I+LDRK+AGP+II C KGGTSIEDLAEK+P+MI+KVPIDVF GITDEDAAKVVDGLAPK ADR D+IEQVKKLY+LF ++DCT+LE +PLAETS QLV RQKE Sbjct: 1 MRGLVNKLVSRSLSISGKWQNQQLRRLNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQDVFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIVKRDEAEEIAGKMLGQVLVTKQTGPQGKVVSKVYLCEKLSLVNEMYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDVFAGITDEDAAKVVDGLAPKAADRKDSIEQVKKLYELFRKTDCTMLEINPLAETSTNQLVAADAKLNFDDNAAFRQKE 262 HSP 2 Score: 40.0466 bits (92), Expect = 3.431e-118 Identity = 23/36 (63.89%), Postives = 27/36 (75.00%), Query Frame = 3 Query: 981 ALREPTQEDPREVAAGKADLNTWAGKGKWVDGE-GC 1085 A+R+PTQEDPREVAA K DLN + G +DGE GC Sbjct: 265 AMRDPTQEDPREVAAAKVDLN-YIG----LDGEIGC 295
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCB_ORYSJ (Succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Oryza sativa subsp. japonica GN=Os02g0621700 PE=1 SV=1) HSP 1 Score: 401.749 bits (1031), Expect = 4.845e-111 Identity = 218/341 (63.93%), Postives = 244/341 (71.55%), Query Frame = 1 Query: 187 MVRGLLNKLVSRSLTVAGQWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLVXXXXXXXXXXXXXXRQKENWLCVNQXXXXXXXXXXXXXXXXXXXXXXN-GWMVKGAGIIRAKMEC-------------WGERLRKGQGVGAIKILT 1167 MVRG L KL SR+L+VAG+WQ QQLRRLNIHEYQGAELM KYGINVP+G A SV+EVK +++ FP KE+VVKSQILAGGRGLGTFKSGL+GGVHIVK EE E LA KMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAI LDR TAGP+II CSKGGTSIEDLAEKYP+MI+KVPIDVF GITD+DAAKVVDGLAPK ADR +IEQ+KKLY+LFC+SDCTLLE +PLAET+ +LV RQKE + + G MV GAG+ A M+ G +GQ V A KILT Sbjct: 1 MVRGSLGKLASRALSVAGKWQHQQLRRLNIHEYQGAELMGKYGINVPRGAAAGSVEEVKNTLKNVFPSEKEIVVKSQILAGGRGLGTFKSGLQGGVHIVKAEEAESLAAKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAITLDRNTAGPLIIACSKGGTSIEDLAEKYPDMIIKVPIDVFKGITDDDAAKVVDGLAPKTADRQSSIEQIKKLYELFCKSDCTLLEINPLAETADNKLVAADAKLNFDDNAAFRQKEIFAMRDTTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGSASEGQVVEAFKILT 341
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCB1_DICDI (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Dictyostelium discoideum GN=scsC PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 5.341e-50 Identity = 100/218 (45.87%), Postives = 141/218 (64.68%), Query Frame = 1 Query: 256 QLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETS 906 Q R LN+HEYQ ++M YGIN P G + +E +K + + ++LVVK+Q+LAGGRG G F SGLKGGV + E+V+ A KMLG LVTKQTG GK+V +VY+ E+ L EMYFAI++DRK GP+++ +GG IE +A P+ I K PID+ G+ E ++ + L + + A +Q+KKLY F ++DCTL+E +PLAET+ Sbjct: 31 QKRFLNVHEYQAQKMMKSYGINCPVGNVAETPEEAEKIAE--VMNTQDLVVKAQVLAGGRGKGIFTSGLKGGVQLCSSAEDVKKFASKMLGHTLVTKQTGEDGKVVHQVYVTERHFLRKEMYFAILMDRKAGGPVMVASPEGGVDIEGVARDNPSAIFKEPIDIMIGVQPEQTKRLAEKLGFSKKNISMAQDQMKKLYDFFIKNDCTLVEINPLAETA 246 HSP 2 Score: 30.0314 bits (66), Expect = 5.341e-50 Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 3 Query: 984 LREPTQEDPREVAAGKADLN 1043 LR+ +QEDPREV A + DLN Sbjct: 273 LRDKSQEDPREVKAAEFDLN 292
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_AKKM8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=sucC PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 9.669e-46 Identity = 92/214 (42.99%), Postives = 133/214 (62.15%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETS 906 +NIHEYQ +L ++G+ PKG+A ++ E + ++ + VVK+Q+ AGGRG GTFK+G KGGVH+VK EEVE++AGKML Q+LVTKQTG GK+VSK+ + E + L E YFAI+ DR P+I+ ++GG IE++A P I++ I+ GI A K+ L A + + +YKLF DC+L+E +PL T+ Sbjct: 1 MNIHEYQAKQLFERFGVATPKGIAASTAQEAAQTARNM--GLSQYVVKAQVHAGGRGKGTFKNGFKGGVHVVKSVEEVEEVAGKMLNQVLVTKQTGEAGKLVSKIMVAEAVDLKKECYFAILQDRARECPVIVASTEGGMDIEEVAATRPEAIIREHINPALGILPFQALKIAVALELTGPLLRQATKLITNVYKLFTALDCSLVEINPLVVTT 212 HSP 2 Score: 33.8834 bits (76), Expect = 9.669e-46 Identity = 14/22 (63.64%), Postives = 18/22 (81.82%), Query Frame = 3 Query: 978 LALREPTQEDPREVAAGKADLN 1043 + +R+ T+EDPREV AGK DLN Sbjct: 237 MEMRDETEEDPREVEAGKYDLN 258
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCB1_PIG (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial (Fragment) OS=Sus scrofa GN=SUCLA2 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 1.216e-45 Identity = 100/225 (44.44%), Postives = 144/225 (64.00%), Query Frame = 1 Query: 241 QWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETS 906 Q QQQQ R L++HEY EL+ + G+++PKG S DE + K++V+K+Q+LAGGRG GTF+SGLKGGV IV EE + ++ +M+G+ L TKQTG +G+I ++V +CE+ E YFAI ++R GP++IG S+GG +IED+A + P IVK PID+ GI E A ++ G P + D A E + KLY LF + D T++E +P+ E S Sbjct: 6 QIQQQQQRNLSLHEYMSMELLQEAGVSIPKGHVAKSPDEAYAIAKKL--GSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFPPSIVD--SAAENMIKLYNLFLKYDATMVEINPMVEDS 226
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCB1_MOUSE (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Mus musculus GN=Sucla2 PE=1 SV=2) HSP 1 Score: 182.57 bits (462), Expect = 3.628e-45 Identity = 103/248 (41.53%), Postives = 149/248 (60.08%), Query Frame = 1 Query: 241 QWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLVXXXXXXXXXXXXXXRQKE 975 Q QQQQ R L++HEY EL+ + G++VPKG S DE + K++V+K+Q+LAGGRG GTF SGLKGGV IV EE + ++ +M+GQ L+TKQTG +G+I ++V +CE+ E YFAI ++R GP++IG ++GG +IED+A + P IVK PID+ GI E A + G + D A E + KLY LF + D T++E +P+ E S +++ RQK+ Sbjct: 44 QVQQQQQRTLSLHEYLSMELLQEAGVSVPKGFVAKSSDEAYAIAKKL--GSKDVVIKAQVLAGGRGKGTFTSGLKGGVKIVFSPEEAKAVSSQMIGQKLITKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSAQGGVNIEDVAAENPEAIVKEPIDIVEGIKKEQAVTLAQKMGFPSNIVD--SAAENMIKLYNLFLKYDATMVEINPMVEDSDGKVLCMDAKINFDSNSAYRQKK 287 HSP 2 Score: 21.9422 bits (45), Expect = 3.628e-45 Identity = 9/20 (45.00%), Postives = 14/20 (70.00%), Query Frame = 3 Query: 984 LREPTQEDPREVAAGKADLN 1043 L++ +QED R+ A AD+N Sbjct: 291 LQDWSQEDERDKEAANADIN 310
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCB1_HUMAN (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Homo sapiens GN=SUCLA2 PE=1 SV=3) HSP 1 Score: 182.185 bits (461), Expect = 6.033e-45 Identity = 99/225 (44.00%), Postives = 143/225 (63.56%), Query Frame = 1 Query: 241 QWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETS 906 Q QQQQ R L++HEY EL+ + G++VPKG S DE + K++V+K+Q+LAGGRG GTF+SGLKGGV IV EE + ++ +M+G+ L TKQTG +G+I ++V +CE+ E YFAI ++R GP++IG S GG +IED+A + P I+K PID+ GI E A ++ G P + + A E + KLY LF + D T++E +P+ E S Sbjct: 44 QVQQQQQRNLSLHEYMSMELLQEAGVSVPKGYVAKSPDEAYAIAKKL--GSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAESPEAIIKEPIDIEEGIKKEQALQLAQKMGFPPNIVE--SAAENMVKLYSLFLKYDATMIEINPMVEDS 264
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCB1_MACFA (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Macaca fascicularis GN=SUCLA2 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 1.755e-44 Identity = 97/225 (43.11%), Postives = 143/225 (63.56%), Query Frame = 1 Query: 241 QWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETS 906 Q QQQQ R L++HEY EL+ + G+++PKG S DE + K++V+K+Q+LAGGRG GTF+SGLKGGV IV EE + ++ +M+G+ L TKQTG +G+I ++V +CE+ E YFAI ++R GP++IG S+GG +IED+A + P I+ PID+ GI E A ++ G P + + A E + KLY LF + D T++E +P+ E S Sbjct: 44 QVQQQQQRNLSLHEYMSMELLQEAGVSIPKGCVAKSPDEAYAVAKKL--GSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERKYPRREYYFAITMERSFQGPVLIGSSQGGVNIEDVAAETPEAIITEPIDIEEGIKKEQALQLAQKMGFPPNIVE--SAAENMVKLYSLFLKYDATMIEINPMVEDS 264
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCB1_BOVIN (Succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial OS=Bos taurus GN=SUCLA2 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.777e-44 Identity = 95/223 (42.60%), Postives = 140/223 (62.78%), Query Frame = 1 Query: 241 QWQQQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETS 906 Q Q QQ R L++HEY EL+ + G+++PKG S DE + K++V+K+Q+LAGGRG GTF+SGLKGGV IV EE + ++ +M+G+ L TKQTG +G+I ++V +CE+ E YFAI ++R GP++IG S GG +IED+A + P IVK PID+ GI E A ++ + + + A E + KLY F + D T++E +P+ E S Sbjct: 44 QIQHQQQRNLSLHEYLSMELLQEAGVSIPKGHVAKSPDEAYAIAKKL--GSKDVVIKAQVLAGGRGKGTFESGLKGGVKIVFSPEEAKAVSSQMIGKKLFTKQTGEKGRICNQVLVCERRYPRREYYFAITMERSFQGPVLIGSSHGGVNIEDVAAETPEAIVKEPIDIVEGIKKEQAVRLAQKMGFPASIVDSAAENMIKLYDPFLKYDATMVEINPMVEDS 264 HSP 2 Score: 25.7942 bits (55), Expect = 1.777e-44 Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = 3 Query: 984 LREPTQEDPREVAAGKADLN 1043 L++ TQED R+ A KADLN Sbjct: 291 LQDWTQEDERDKDAAKADLN 310
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCB_NEUCR (Probable succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Neurospora crassa GN=B9J10.140 PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 2.293e-44 Identity = 97/225 (43.11%), Postives = 143/225 (63.56%), Query Frame = 1 Query: 250 QQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 QQQ R L+IHEY A+L+ +YGI VPKG VA +AI +++V+K+Q+LAGGRG GTF +GLKGGV ++ E + A +M+G L+TKQTG QG++ S VY+CE+ E Y A+++DR + GP+I+ S+GG IE +A++ P I ID+ G+TDE A + L +A + ++KLYK+FCE D T +E +PL+ETS +++ Sbjct: 31 QQQRRALSIHEYLSADLLRQYGIGVPKG-DVARTGAEAEAIAKQIGG-EDMVIKAQVLAGGRGKGTFDNGLKGGVRVIYSPTEAKMFAEQMIGHKLITKQTGAQGRLCSAVYICERKFARREFYLAVLMDRASQGPVIVSSSQGGMDIEGVAKENPEAIHTTYIDINVGVTDEMARDIATKLGFSEQCVEEAKDTIQKLYKIFCEKDATQIEINPLSETSDHKVM 253 The following BLAST results are available for this feature:
BLAST of DY262816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262816 ID=DY262816; Name=DY262816; organism=Citrus clementina; type=EST; length=1311bpback to top |