DY262816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_PARDP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Paracoccus denitrificans (strain Pd 1222) GN=sucC PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.335e-38 Identity = 85/213 (39.91%), Postives = 121/213 (56.81%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL 894 +NIHEYQ L+ +YG V G V DE K A + D VVK+QI AGGRG G FK +G KGGV + K EE E+LA +MLG+ LVT QTG GK V+++Y+ + + E+Y A+++DR T+ + ++GG IE++A P IV +D +G++D +V L A + VK LY++F E D +LE +PL Sbjct: 1 MNIHEYQAKALLRQYGAPVSDGRVVMKADEAKAAAGEL--DGPLWVVKAQIHAGGRGKGHFKEKEAGEKGGVRLAKSVEEAEELARQMLGRTLVTHQTGETGKQVNRIYIEDGSDIERELYLALLVDRGTSRVSFVASTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLSGAQVKQCVALVKNLYRMFIEKDMEMLEINPL 211 HSP 2 Score: 36.1946 bits (82), Expect = 6.335e-38 Identity = 21/37 (56.76%), Postives = 26/37 (70.27%), Query Frame = 3 Query: 978 LALREPTQEDPREVAAGKADLNTWAGKGKWVDGE-GC 1085 LALR+ T+EDP+E+AA K DLN A +DGE GC Sbjct: 240 LALRDETEEDPKELAASKFDLNYIA-----LDGEIGC 271
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_BRUSU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella suis GN=sucC PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.401e-37 Identity = 91/213 (42.72%), Postives = 125/213 (58.69%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL 894 +NIHEYQ L+ YG + G+AV SV++ ++ + VVKSQI AGGRG G FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L + R D ++ LYK F E D +LLE +PL Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTL--PGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDMSLLEINPL 211 HSP 2 Score: 27.335 bits (59), Expect = 1.401e-37 Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 3 Query: 984 LREPTQEDPREVAAGKADL 1040 LR+ T+EDP+E+ A K DL Sbjct: 242 LRDLTEEDPKEIEASKYDL 260
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_BRUSI (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=sucC PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.401e-37 Identity = 91/213 (42.72%), Postives = 125/213 (58.69%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL 894 +NIHEYQ L+ YG + G+AV SV++ ++ + VVKSQI AGGRG G FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L + R D ++ LYK F E D +LLE +PL Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTL--PGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDMSLLEINPL 211 HSP 2 Score: 27.335 bits (59), Expect = 1.401e-37 Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 3 Query: 984 LREPTQEDPREVAAGKADL 1040 LR+ T+EDP+E+ A K DL Sbjct: 242 LRDLTEEDPKEIEASKYDL 260
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_BRUO2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=sucC PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.401e-37 Identity = 91/213 (42.72%), Postives = 125/213 (58.69%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL 894 +NIHEYQ L+ YG + G+AV SV++ ++ + VVKSQI AGGRG G FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L + R D ++ LYK F E D +LLE +PL Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTL--PGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDMSLLEINPL 211 HSP 2 Score: 27.335 bits (59), Expect = 1.401e-37 Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 3 Query: 984 LREPTQEDPREVAAGKADL 1040 LR+ T+EDP+E+ A K DL Sbjct: 242 LRDLTEEDPKEIEASKYDL 260
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_BRUME (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella melitensis GN=sucC PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.401e-37 Identity = 91/213 (42.72%), Postives = 125/213 (58.69%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL 894 +NIHEYQ L+ YG + G+AV SV++ ++ + VVKSQI AGGRG G FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L + R D ++ LYK F E D +LLE +PL Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTL--PGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDMSLLEINPL 211 HSP 2 Score: 27.335 bits (59), Expect = 1.401e-37 Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 3 Query: 984 LREPTQEDPREVAAGKADL 1040 LR+ T+EDP+E+ A K DL Sbjct: 242 LRDLTEEDPKEIEASKYDL 260
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_BRUMB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=sucC PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.401e-37 Identity = 91/213 (42.72%), Postives = 125/213 (58.69%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL 894 +NIHEYQ L+ YG + G+AV SV++ ++ + VVKSQI AGGRG G FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L + R D ++ LYK F E D +LLE +PL Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTL--PGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDMSLLEINPL 211 HSP 2 Score: 27.335 bits (59), Expect = 1.401e-37 Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 3 Query: 984 LREPTQEDPREVAAGKADL 1040 LR+ T+EDP+E+ A K DL Sbjct: 242 LRDLTEEDPKEIEASKYDL 260
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_BRUC2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=sucC PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.401e-37 Identity = 91/213 (42.72%), Postives = 125/213 (58.69%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL 894 +NIHEYQ L+ YG + G+AV SV++ ++ + VVKSQI AGGRG G FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L + R D ++ LYK F E D +LLE +PL Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTL--PGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDMSLLEINPL 211 HSP 2 Score: 27.335 bits (59), Expect = 1.401e-37 Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 3 Query: 984 LREPTQEDPREVAAGKADL 1040 LR+ T+EDP+E+ A K DL Sbjct: 242 LRDLTEEDPKEIEASKYDL 260
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_BRUAB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella abortus GN=sucC PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.401e-37 Identity = 91/213 (42.72%), Postives = 125/213 (58.69%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL 894 +NIHEYQ L+ YG + G+AV SV++ ++ + VVKSQI AGGRG G FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L + R D ++ LYK F E D +LLE +PL Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTL--PGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDMSLLEINPL 211 HSP 2 Score: 27.335 bits (59), Expect = 1.401e-37 Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 3 Query: 984 LREPTQEDPREVAAGKADL 1040 LR+ T+EDP+E+ A K DL Sbjct: 242 LRDLTEEDPKEIEASKYDL 260
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_BRUA1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brucella abortus (strain S19) GN=sucC PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 1.401e-37 Identity = 91/213 (42.72%), Postives = 125/213 (58.69%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL 894 +NIHEYQ L+ YG + G+AV SV++ ++ + VVKSQI AGGRG G FK + KGGV + K EEV A +MLG LVTKQTG GK V+++Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA K+ D L + R D ++ LYK F E D +LLE +PL Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTL--PGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGEAGKQVNRLYIEDGADIERELYLSILIDRSVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDANKLADALKLEGGAREDGLKLFPILYKAFTEKDMSLLEINPL 211 HSP 2 Score: 27.335 bits (59), Expect = 1.401e-37 Identity = 11/19 (57.89%), Postives = 15/19 (78.95%), Query Frame = 3 Query: 984 LREPTQEDPREVAAGKADL 1040 LR+ T+EDP+E+ A K DL Sbjct: 242 LRDLTEEDPKEIEASKYDL 260
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_MAGSA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=sucC PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 2.715e-37 Identity = 88/221 (39.82%), Postives = 130/221 (58.82%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGL--KGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 +NIHEYQG +++AKYG+ V KG + DE + +D VVKSQI AGGRG G FK+ KGGV + K EEV+ +MLGQ+L+TKQTGP GK V +VY+ + + E+Y ++++DR T I+ ++GG IE++A +P I+KV ID G ++ GL + N ++ V LYK F + DC+++E +PL T +L+ Sbjct: 1 MNIHEYQGKQVLAKYGVAVLKGGVAYTPDEAVQVAKDL--GGPVWVVKSQIHAGGRGAGRFKNDPNGKGGVRVAKSVEEVKTNVDQMLGQVLITKQTGPAGKEVKRVYIEQGCDIKRELYLSMLVDRATCRVTIVASTEGGMEIEEVAHNHPEKILKVAIDPVEGFQQYHGRQIAFGLGLEGKQVNTCVKFVGALYKAFMDLDCSIVEINPLVVTGAGELI 219 The following BLAST results are available for this feature:
BLAST of DY262816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262816 ID=DY262816; Name=DY262816; organism=Citrus clementina; type=EST; length=1311bpback to top |