DY262816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_EXIS2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=sucC PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 3.098e-37 Identity = 83/213 (38.97%), Postives = 123/213 (57.75%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAET 903 +N+HEYQ EL+ YG+ VP G+A +V+E A + K VVK+QI AGGRG GGV + K +EEV++ A ++LG+ LVT QTGP+GK++ ++ + E ++ E Y I+LDR T +I+G S+GG IE++AE P I+K +D G+ A K+ + V N + V KLY F + DC++ E +PL T Sbjct: 1 MNVHEYQAKELLRSYGVPVPNGIAAFTVEEAVDAAEQLSGPIK--VVKAQIHAGGRGKA-------GGVKLAKSQEEVKEFATELLGKTLVTHQTGPEGKVIQRLLVEEGCAIDKEYYLGIVLDRVTGRVVIMGSSEGGMDIEEVAEATPEKIIKEVVDPAVGLQAFQARKLAFAMGVPVKLVNKFVGMVTKLYTFFVDKDCSIAEINPLVTT 204 HSP 2 Score: 33.8834 bits (76), Expect = 3.098e-37 Identity = 15/22 (68.18%), Postives = 18/22 (81.82%), Query Frame = 3 Query: 978 LALREPTQEDPREVAAGKADLN 1043 +ALR+ T+EDPREV A K DLN Sbjct: 230 VALRDETEEDPREVEASKNDLN 251
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_OCHA4 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=sucC PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 7.898e-37 Identity = 92/213 (43.19%), Postives = 127/213 (59.62%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL 894 +NIHEYQ L+ YG + G+AV SV++ ++ + VVKSQI AGGRG G FK + KGGV + K EEV A +MLG LVTKQTGP GK V+++Y+ + + E+Y +I++DR P + ++GG IE +AE+ P IV V ID G+TDEDA+K+ D L + R D ++ LYK F E D +LLE +PL Sbjct: 1 MNIHEYQAKRLLHTYGAPIANGVAVYSVEQAEEWAKTL--PGPLYVVKSQIHAGGRGKGKFKELPADAKGGVRLAKSVEEVVANAKEMLGNTLVTKQTGPAGKQVNRLYIEDGADIDRELYLSILIDRTVGRPAFVVSTEGGMDIEAVAEETPEKIVTVAIDPAKGVTDEDASKLADALKLEGQAREDGVKLFPILYKAFTEKDMSLLEINPL 211
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_RHOS5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=sucC PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 8.918e-37 Identity = 84/213 (39.44%), Postives = 119/213 (55.87%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL 894 +NIHEYQ L+ YG V G V DE K A + VVK+QI AGGRG G FK +G KGGV + K E +LA +MLG+ LVT QTGP GK V+++Y+ E + E+Y A+++DR T+ + ++GG IE++A P IV +D +G++D +V L + A ++ VK LY+ F E D +LE +PL Sbjct: 1 MNIHEYQAKALLRSYGAPVSDGRVVLKADEAKSAAGEL--GGPLWVVKAQIHAGGRGKGKFKEPEAGEKGGVRLAKSVGEAAELAKQMLGRTLVTHQTGPSGKQVNRIYIEEGSDIARELYLALLVDRGTSRISFVVSTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLEGAQVKQCVQLVKNLYRAFVEKDMEMLEINPL 211 HSP 2 Score: 35.4242 bits (80), Expect = 8.918e-37 Identity = 20/37 (54.05%), Postives = 26/37 (70.27%), Query Frame = 3 Query: 978 LALREPTQEDPREVAAGKADLNTWAGKGKWVDGE-GC 1085 +ALR+ T+EDP+E+AA K DLN A +DGE GC Sbjct: 240 MALRDETEEDPKELAASKFDLNYIA-----LDGEIGC 271
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_RHOSK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=sucC PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.162e-36 Identity = 84/213 (39.44%), Postives = 119/213 (55.87%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL 894 +NIHEYQ L+ YG V G V DE K A + VVK+QI AGGRG G FK +G KGGV + K E +LA +MLG+ LVT QTGP GK V+++Y+ E + E+Y A+++DR T+ + ++GG IE++A P IV +D +G++D +V L + A ++ VK LY+ F E D +LE +PL Sbjct: 1 MNIHEYQAKALLRSYGAPVSDGRVVLKADEAKSAAGEL--GGPLWVVKAQIHAGGRGKGKFKEPEAGEKGGVRLAKSVGEAAELAKQMLGRTLVTHQTGPAGKQVNRIYIEEGSDIARELYLALLVDRGTSRISFVVSTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLEGAQVKQCVQLVKNLYRAFVEKDMEMLEINPL 211 HSP 2 Score: 35.4242 bits (80), Expect = 1.162e-36 Identity = 20/37 (54.05%), Postives = 26/37 (70.27%), Query Frame = 3 Query: 978 LALREPTQEDPREVAAGKADLNTWAGKGKWVDGE-GC 1085 +ALR+ T+EDP+E+AA K DLN A +DGE GC Sbjct: 240 MALRDETEEDPKELAASKFDLNYIA-----LDGEIGC 271
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_RHOS4 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=sucC PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.162e-36 Identity = 84/213 (39.44%), Postives = 119/213 (55.87%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL 894 +NIHEYQ L+ YG V G V DE K A + VVK+QI AGGRG G FK +G KGGV + K E +LA +MLG+ LVT QTGP GK V+++Y+ E + E+Y A+++DR T+ + ++GG IE++A P IV +D +G++D +V L + A ++ VK LY+ F E D +LE +PL Sbjct: 1 MNIHEYQAKALLRSYGAPVSDGRVVLKADEAKSAAGEL--GGPLWVVKAQIHAGGRGKGKFKEPEAGEKGGVRLAKSVGEAAELAKQMLGRTLVTHQTGPAGKQVNRIYIEEGSDIARELYLALLVDRGTSRISFVVSTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLEGAQVKQCVQLVKNLYRAFVEKDMEMLEINPL 211 HSP 2 Score: 35.4242 bits (80), Expect = 1.162e-36 Identity = 20/37 (54.05%), Postives = 26/37 (70.27%), Query Frame = 3 Query: 978 LALREPTQEDPREVAAGKADLNTWAGKGKWVDGE-GC 1085 +ALR+ T+EDP+E+AA K DLN A +DGE GC Sbjct: 240 MALRDETEEDPKELAASKFDLNYIA-----LDGEIGC 271
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_RHOS1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=sucC PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.162e-36 Identity = 84/213 (39.44%), Postives = 119/213 (55.87%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL 894 +NIHEYQ L+ YG V G V DE K A + VVK+QI AGGRG G FK +G KGGV + K E +LA +MLG+ LVT QTGP GK V+++Y+ E + E+Y A+++DR T+ + ++GG IE++A P IV +D +G++D +V L + A ++ VK LY+ F E D +LE +PL Sbjct: 1 MNIHEYQAKALLRSYGAPVSDGRVVLKADEAKSAAGEL--GGPLWVVKAQIHAGGRGKGKFKEPEAGEKGGVRLAKSVGEAAELAKQMLGRTLVTHQTGPAGKQVNRIYIEEGSDIARELYLALLVDRGTSRISFVVSTEGGMDIEEVAASTPEKIVSFSVDPASGLSDFHGRRVAFALGLEGAQVKQCVQLVKNLYRAFVEKDMEMLEINPL 211 HSP 2 Score: 35.4242 bits (80), Expect = 1.162e-36 Identity = 20/37 (54.05%), Postives = 26/37 (70.27%), Query Frame = 3 Query: 978 LALREPTQEDPREVAAGKADLNTWAGKGKWVDGE-GC 1085 +ALR+ T+EDP+E+AA K DLN A +DGE GC Sbjct: 240 MALRDETEEDPKELAASKFDLNYIA-----LDGEIGC 271
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_BART1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=sucC PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.513e-36 Identity = 86/213 (40.38%), Postives = 125/213 (58.69%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL 894 +NIHEYQ L+ +YG + G+AV S+++ +K + VVKSQI AGGRG G FK KGGV + + EEV +MLG+ LVTKQTGP+GK V+++Y+ + + E+Y ++++DR + ++GG IE +AE+ P I +PIDV G+T D A++ D L + R D + LYK FCE D +LLE +PL Sbjct: 1 MNIHEYQAKRLLHEYGAPIANGVAVYSIEQAEKWAKKL--PGPLYVVKSQIHAGGRGKGQFKELGPDAKGGVRLAQSVEEVVANVQEMLGKTLVTKQTGPEGKQVNRLYIEDGADIERELYLSLLVDRSVGRIAFVVSTEGGMDIETVAEETPEKIFTLPIDVTEGVTSADCARLCDALELHDSAREDGEKLFPILYKAFCEKDMSLLEINPL 211 HSP 2 Score: 26.9498 bits (58), Expect = 1.513e-36 Identity = 11/21 (52.38%), Postives = 16/21 (76.19%), Query Frame = 3 Query: 978 LALREPTQEDPREVAAGKADL 1040 L LR+ ++EDP+E+ A K DL Sbjct: 240 LELRDLSEEDPKEIEASKHDL 260
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_BARBK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=sucC PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 1.971e-36 Identity = 89/213 (41.78%), Postives = 124/213 (58.22%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL 894 +NIHEYQ L+ +YG V G+AV SV++ +K + VVKSQI AGGRG G FK S KGGV + K EEV +MLG+ LVTKQTGP+GK V+++Y+ + ++ E+Y ++++DR T + ++GG IE +A + P I + ID G+TD D K+ D L R D + LYK FCE D +LLE +PL Sbjct: 1 MNIHEYQAKRLLHEYGAPVANGVAVYSVEQAEKWAKKL--PGPLYVVKSQIHAGGRGKGNFKELDSDAKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQVNRLYIEDGANIERELYLSLLIDRTTGRVAFVVSTEGGMDIETVAAETPEKICTLSIDPAEGVTDADCVKLCDELNLSGNAREDGEKLFPILYKAFCEKDMSLLEINPL 211 HSP 2 Score: 27.335 bits (59), Expect = 1.971e-36 Identity = 11/21 (52.38%), Postives = 16/21 (76.19%), Query Frame = 3 Query: 978 LALREPTQEDPREVAAGKADL 1040 L LR+ ++EDP+E+ A K DL Sbjct: 240 LGLRDISEEDPKEIEASKHDL 260
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_BARHE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella henselae GN=sucC PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.971e-36 Identity = 86/213 (40.38%), Postives = 125/213 (58.69%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL 894 +NIHEYQ L+ +YG + G+AV SV++ +K + VVKSQI AGGRG G FK KGGV + K EEV +MLG+ LVTKQTGP+GK V+++Y+ + + E+Y ++++DR + ++GG IE +AE+ P I+ +PI+ G+T D A++ D L + R D + LYK FCE D +LLE +PL Sbjct: 1 MNIHEYQAKRLLHEYGAPIANGVAVYSVEQAEKWAKKL--PGPLYVVKSQIHAGGRGKGKFKELDPDAKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQVNRLYIEDGADIERELYLSLLVDRNVGRVAFVVSTEGGMDIETVAEETPEKILTLPINSTQGVTSSDCARLCDALDLHDSAREDGEKLFPILYKAFCEKDMSLLEINPL 211 HSP 2 Score: 27.7202 bits (60), Expect = 1.971e-36 Identity = 11/21 (52.38%), Postives = 16/21 (76.19%), Query Frame = 3 Query: 978 LALREPTQEDPREVAAGKADL 1040 L LR+ ++EDP+E+ A K DL Sbjct: 240 LELRDTSEEDPKEIEASKHDL 260
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_EXISA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=sucC PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 9.635e-36 Identity = 83/219 (37.90%), Postives = 125/219 (57.08%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 +NIHEYQ EL+ ++G+ VP G +V+E A A D + VVK+QI AGGRG GGV + K EEV+ A ++LG+ LVT QTGP+GK+V ++Y+ E ++ E Y ++LDR +I+G S+GG IE++AE P I K +D G+ A ++ + N+ + V KLYK++ E+DCT+ E +PL T ++ Sbjct: 1 MNIHEYQAKELLREFGVAVPTGYPAFTVEEAVAAA--AKLDGEVKVVKAQIHAGGRGKA-------GGVKLAKTDEEVKQYASEILGKTLVTHQTGPEGKVVQRLYIEEGSAIDQEFYLGLVLDRSIGRIVIMGSSEGGMDIEEVAEHTPEKIHKEIVDPVVGLRPFQARRLAFKMEVPTKLVNEFSDMVMKLYKVYVETDCTIAEINPLVTTKDGNVI 210 HSP 2 Score: 33.113 bits (74), Expect = 9.635e-36 Identity = 15/22 (68.18%), Postives = 18/22 (81.82%), Query Frame = 3 Query: 978 LALREPTQEDPREVAAGKADLN 1043 LALR+ T+EDPREV A K DL+ Sbjct: 230 LALRDTTEEDPREVEASKHDLS 251 The following BLAST results are available for this feature:
BLAST of DY262816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262816 ID=DY262816; Name=DY262816; organism=Citrus clementina; type=EST; length=1311bpback to top |