DY262816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_SULNB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Sulfurovum sp. (strain NBC37-1) GN=sucC PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.140e-35 Identity = 84/220 (38.18%), Postives = 131/220 (59.55%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA-PKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 +N+HEYQ ++ A+YG+ PKG+ SVD +A ++ VVK+QI AGGRGLG GGV + K +EV +LA ++LG LVT QTGP+GK+V K+Y+ + + +E Y +++LDRK P+I+ ++GG +IED+AE P I+ VP+D G ++ GL A++ + I +KLYKL+ + D ++E +PL T + + Sbjct: 1 MNVHEYQAKQIFAEYGVPTPKGIMAESVDAAVEAAKEL--GGPIWVVKAQIHAGGRGLG-------GGVKLAKSLDEVRELADEILGMTLVTHQTGPEGKLVQKLYIEDGADIKDEFYLSVILDRKLEMPLIMASTEGGMNIEDVAENTPEKIITVPVDPTIGFQGFHGRELAFGLGITDKAEQKNIITFAQKLYKLYMDKDAEMIEINPLVRTGSGEFL 211
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_DESAA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Desulfatibacillum alkenivorans (strain AK-01) GN=sucC PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 2.541e-35 Identity = 90/221 (40.72%), Postives = 131/221 (59.28%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDA--FPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 + IHEYQ EL A YG+ VPKG V SVDE +A ++ FP +VVK+QI AGGRG G GGV + + +EV+ +AG++LG LVT QTGP+G+ V K+ + + L + E+YF+I++DR TA +I+ GG IE++A P I+KVP+D G+ + L A I+ V+ LYK+F ++DC+LLE +PL T ++ Sbjct: 1 MKIHEYQAKELFANYGVPVPKGKPVFSVDEAVEAAKELGDFP----VVVKAQIHAGGRGKG-------GGVKLAQNIDEVKTIAGEILGMQLVTHQTGPEGQKVQKLLVEQGLDIAKELYFSIIVDRATAKIVIMCSEAGGMDIEEVAASTPEKIIKVPVDPLLGVQGYHCRQAAYRLNLPPAAIKPFIKMVQGLYKMFMDTDCSLLEINPLVLTGDDGII 210
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_BARQU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella quintana GN=sucC PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.773e-35 Identity = 84/213 (39.44%), Postives = 122/213 (57.28%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL 894 +NIHEYQ L+ +YG + G+AV S+++ +K + VVKSQI AGGRG G FK KGGV + K EEV +MLG+ LVTKQTGP+GK V+++Y+ + + E+Y ++++DR + +GG IE +AE+ P I+ +P+D G+T D ++ D L R D + LYK FCE D +LLE +PL Sbjct: 1 MNIHEYQAKRLLHEYGAPIANGVAVYSIEQAEKWAKKL--PGPLYVVKSQIHAGGRGKGKFKELDLDSKGGVRLAKSVEEVVANVKEMLGKTLVTKQTGPEGKQVNRLYIEDGADIERELYLSLLVDRAVGRVAFVVSMEGGMDIETVAEETPEKILTLPVDPVQGVTSADCKRLCDALELHDNARKDGEKLFPILYKAFCEKDMSLLEINPL 211 HSP 2 Score: 26.9498 bits (58), Expect = 2.773e-35 Identity = 11/21 (52.38%), Postives = 16/21 (76.19%), Query Frame = 3 Query: 978 LALREPTQEDPREVAAGKADL 1040 L LR+ ++EDP+E+ A K DL Sbjct: 240 LELRDLSEEDPKEIEASKHDL 260
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_SULDN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=sucC PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 4.334e-35 Identity = 89/223 (39.91%), Postives = 132/223 (59.19%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKEL-VVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRND---AIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 +NIHEYQ ++ AKYG+ PKGL SV K+A+ +A + VVK+QI AGGRGLG GGV + + EEVE L+ ++LG LVT QTGP+GK+V K+Y+ E + E+Y ++LDR P+I+ ++GG +IED+A P I+K+ +D G ++V GL + D N+ I KLYKL+ E+D ++E +PL +T + + Sbjct: 1 MNIHEYQAKQIFAKYGVPTPKGLMAESV---KQAVANAETLGGSIWVVKAQIHAGGRGLG-------GGVKLARSLEEVEQLSKEILGMTLVTHQTGPEGKLVQKLYIEEGADIKEELYLGVVLDRAREMPVIMASTEGGMAIEDVAHNTPEKIIKIAVDPAIGFQGFHGRELVFGLG--ITDPNEQKKLISFASKLYKLYMENDAEMIEINPLVKTGSGEFL 211
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_ALKMQ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Alkaliphilus metalliredigens (strain QYMF) GN=sucC PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 4.704e-35 Identity = 82/219 (37.44%), Postives = 128/219 (58.45%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 +NIHEYQG E+M +YGI+VP+ +V+E +A D + + VK+QI AGGRG GGV I + EE + A +L +IL+TKQTGP+GK+V++V + E L + E Y + +D T+ ++IG +GG IE++AEK P+ I K ID G+ A ++ + A +A + + +Y+LF E DC+++E +PL T ++V Sbjct: 1 MNIHEYQGKEIMKQYGISVPRSRITFTVEEAVQAAIDL--GCEVIAVKAQIHAGGRGKA-------GGVKITRSLEETKSAAEAILDKILITKQTGPEGKVVNQVLIEEGLKIEKECYLSCAVDSTTSTVVLIGSPEGGMDIEEVAEKTPHKIFKESIDPAIGLQQYQARRLAFNMGINEACLQEAAQCIMNIYRLFMEKDCSMVEINPLITTEEHKVV 210 HSP 2 Score: 28.4906 bits (62), Expect = 4.704e-35 Identity = 13/22 (59.09%), Postives = 16/22 (72.73%), Query Frame = 3 Query: 978 LALREPTQEDPREVAAGKADLN 1043 L R+ T+EDPREV A K DL+ Sbjct: 230 LKYRDLTEEDPREVQASKYDLS 251
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_RHIME (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhizobium meliloti GN=sucC PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.764e-34 Identity = 92/223 (41.26%), Postives = 124/223 (55.61%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL-AETSGKQLV 921 +NIHEYQ L+ YG V +G+A+ S DE + A + VVKSQI AGGRG G FK KGGV + K +EV A MLG LVTKQTGP GK V+++Y+ + + E+Y +I++DR + ++GG IE +AE P IV V ID G+T E+ + D L + R DA + LYK F E D +LLE +PL T+G+ V Sbjct: 1 MNIHEYQAKALLKSYGAPVAEGVAIFSADEAEAAAKKL--PGPLYVVKSQIHAGGRGKGKFKELGPDAKGGVRLAKSVDEVVANAKDMLGNTLVTKQTGPAGKQVNRLYIEDGADIDRELYLSILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPEKGVTAENLKTLADALKLEGEARADAEKLFPILYKAFVEKDMSLLEVNPLIVMTNGRMRV 221 HSP 2 Score: 27.335 bits (59), Expect = 1.764e-34 Identity = 12/24 (50.00%), Postives = 17/24 (70.83%), Query Frame = 3 Query: 969 ERKLALREPTQEDPREVAAGKADL 1040 E +ALR+ T+ED +E+ A K DL Sbjct: 237 EDVVALRDTTEEDDKEIEASKYDL 260
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCB2_CAEEL (Probable succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Caenorhabditis elegans GN=C50F7.4 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.151e-34 Identity = 89/245 (36.33%), Postives = 139/245 (56.73%), Query Frame = 1 Query: 250 QQQLRRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKG--GVHIVKKEEVE-DLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLVXXXXXXXXXXXXXXRQKE 975 + Q R LN+ E+Q E++ K+G +V + ++ E ++ +F DH E VVK+QILAGGRG G F +G KG GV I K+++ + +M+G+ LVTKQT +G V KV + E + + E Y A+++DR++ GP+++ GG IE +AEK P I K PID+ G+T+ + K+ L + A +++K+LY LF D T +E +PL ET+ ++ RQKE Sbjct: 14 KSQRRFLNLQEFQSKEILEKHGCSVQNFVVASNRKEAEEKWM-SFGDH-EYVVKAQILAGGRGKGKFINGTKGIGGVFITKEKDAALEAIDEMIGKRLVTKQTTSEGVRVDKVMIAEGVDIKRETYLAVLMDRESNGPVVVASPDGGMDIEAVAEKTPERIFKTPIDIQMGMTEGQSLKIAKDLQFEGKLIGVAAQEIKRLYDLFIAVDATQVEINPLVETADGRVFCVDAKMNFDDSAAYRQKE 256
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_BACP2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus pumilus (strain SAFR-032) GN=sucC PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.298e-34 Identity = 86/237 (36.29%), Postives = 130/237 (54.85%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLVXXXXXXXXXXXXXXRQKE 975 +NIHEYQG E++ KYG++VP G + DE KA ++ + VVK+QI AGGRG GGV I K K+EV+ A ++LG+ LVT QTGP+G+ + ++ + E + E Y ++LDR T+ +++ +GGT IE++AEK P IVKV ID G+ A +V + A++ + LY F E DC++ E +PL T +++ RQK+ Sbjct: 1 MNIHEYQGKEILRKYGVSVPNGKVAFTPDEAVKASEEL--ESSVYVVKAQIHAGGRGKA-------GGVKIAKTKDEVKGFAEELLGKTLVTHQTGPEGREIKRLLIEEGCDIQKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKVVIDPAIGLQGYQAREVAFKINIPTKLVGQAVKFMTSLYNAFIEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQKD 228 HSP 2 Score: 24.6386 bits (52), Expect = 2.298e-34 Identity = 10/22 (45.45%), Postives = 15/22 (68.18%), Query Frame = 3 Query: 978 LALREPTQEDPREVAAGKADLN 1043 L R+ +EDP+E+ A K DL+ Sbjct: 230 LEYRDLDEEDPKEIEASKYDLS 251
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_NOVAD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=sucC PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.991e-34 Identity = 88/226 (38.94%), Postives = 126/226 (55.75%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK----LYKLFCESDCTLLENHPLAETSGKQLV 921 +N+HEYQ EL+AKYG+ +P G+A +V+E A + VVK+QI AGGRG G FK + KGGV + K EEVE A +MLG LVT QTG GK V+++Y+ + + + E Y ++++DR T II ++GG IE++A P I + ID G V G A K++ D ++Q K LY F DC++LE +PL +T L+ Sbjct: 1 MNVHEYQAKELLAKYGVGIPAGIAALTVEEAVAAAKQL--PGPLYVVKAQIHAGGRGKGKFKELPADAKGGVRLAKSIEEVEAFAKEMLGNTLVTVQTGEAGKQVNRLYVTDGVDIDKEYYLSMVVDRATGRVAIIVSTEGGMDIEEVAHSTPEKIATIVIDPAEGFMPHHGRAV--GFALKLS--GDLLKQAAKIAEQLYTAFVALDCSMLEINPLVQTKDGNLL 220 HSP 2 Score: 28.8758 bits (63), Expect = 2.991e-34 Identity = 12/21 (57.14%), Postives = 16/21 (76.19%), Query Frame = 3 Query: 978 LALREPTQEDPREVAAGKADL 1040 +ALR+ T+EDP E+ A K DL Sbjct: 240 VALRDETEEDPAEIEASKYDL 260
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_SINMW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Sinorhizobium medicae (strain WSM419) GN=sucC PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.992e-34 Identity = 91/223 (40.81%), Postives = 124/223 (55.61%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL-AETSGKQLV 921 +NIHEYQ L+ YG V +G+A+ S DE A + VVKSQI AGGRG G FK + KGGV + K +EV A +MLG LVTKQTGP GK V+++Y+ + + E+Y +I++DR + ++GG IE +AE P IV V ID G+T +D + + L R DA + LYK F E D +LLE +PL T+G+ V Sbjct: 1 MNIHEYQAKALLKSYGAPVAEGVAIFSADEAAAAAKKL--PGPLYVVKSQIHAGGRGKGKFKELGADAKGGVRLAKSADEVVAHAREMLGNTLVTKQTGPSGKQVNRLYIEDGADIDRELYLSILVDRSVGQVAFVVSTEGGMDIEAVAEHTPEKIVTVAIDPDKGVTADDLKTLTEALKLDGEARADAEKLFPILYKAFVEKDMSLLEVNPLIVMTNGRMRV 221 HSP 2 Score: 27.335 bits (59), Expect = 2.992e-34 Identity = 12/24 (50.00%), Postives = 17/24 (70.83%), Query Frame = 3 Query: 969 ERKLALREPTQEDPREVAAGKADL 1040 E +ALR+ T+ED +E+ A K DL Sbjct: 237 EDVVALRDTTEEDEKEIEASKYDL 260 The following BLAST results are available for this feature:
BLAST of DY262816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262816 ID=DY262816; Name=DY262816; organism=Citrus clementina; type=EST; length=1311bpback to top |