DY262816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_PROAC (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Propionibacterium acnes GN=sucC PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.686e-19 Identity = 70/284 (24.65%), Postives = 132/284 (46.48%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLVXXXXXXXXXXXXXXRQKENWLCVNQXXXXXXXXXXXXXXXXXXXXXXN-GWMVKGAGIIRAKMEC 1113 ++++EYQ +L K+G+ V +G+ + ++ +A A + VK+Q+ GGRG GGV I K E + A +LG + +G V KV + E + E YF+I+LDR + + +GG IE LA++ P + KVP+D +G+ D A +++ ++++ + V KL++ + + D TL+E +P+ +T +++ RQ ++ V++ N G + GAG++ + ++C Sbjct: 1 MDLYEYQARDLFEKHGVPVLRGIVAETPEQASEAA--AKLGTPVVAVKAQVKVGGRGKA-------GGVKIAKSAAEAAERAEAILGMDI-------KGHTVHKVMVAEGADIAEEYYFSILLDRGERRYLAMCSREGGMDIETLAKERPEALAKVPVDPIDGVDDAKAREILSEAGFPDSEQDAIVPAVLKLWETYRDEDATLVEVNPMIKTGDGRILAIDGKMTVDNNASFRQPDHAGLVDRATTDPLELRAGELGLNYVKLDGNVGVIGNGAGLVMSTLDC 268
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_HAEI8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus influenzae (strain 86-028NP) GN=sucC PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.686e-19 Identity = 69/219 (31.51%), Postives = 104/219 (47.49%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 +N+HEYQ +L YG+ V G SV++V + D + K Q+ AGGRG GGV +V+ EE A K LGQ LVT QT G+ V+++Y E + E Y + ++DR + + I GG +IE++A+ +++ KV ID G ++ L + L +LF E D +L+E +PL T LV Sbjct: 1 MNLHEYQAKQLFEHYGLPVKNGAVCQSVEDVDLVLAQLSGD--KWAAKCQVHAGGRGKA-------GGVKLVQDVEEARAFAEKWLGQRLVTFQTDKLGQPVNQIYFEETCDIDKEFYLSAVVDRASQKVMFIASPAGGMNIEEVAQNSLHLLHKVEIDPLFGGLPYQGRELAFKLGLSGTQNKQFTDIFMGLSRLFLEKDLSLVEVNPLVLTKQGYLV 210
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_SERP5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Serratia proteamaculans (strain 568) GN=sucC PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.546e-19 Identity = 69/223 (30.94%), Postives = 108/223 (48.43%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLENHPLAETSGKQLV 921 +N+HEYQ +L A+YG+ P G A + E ++A VVK Q+ AGGRG GGV +V KE++ A LG+ LVT QT G+ V ++ + + E+Y ++DR + + + ++GG IE +AE+ P +I K+ ID G + LA K+ + Q K++ LF E D ++E +PL T L+ Sbjct: 1 MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKI--GSGPWVVKCQVHAGGRGKA-------GGVKVVNSKEDIRAFAEAWLGKRLVTYQTDALGQPVHQILVEAATDIDKELYLGAVVDRASRRVVFMASTEGGVEIEKVAEETPELIHKMTIDPLAGPQPYQGRE----LAFKLGLTGKQVGQFAKIFMGLATLFLERDLAMVEINPLVVTKQGDLI 210 HSP 2 Score: 21.557 bits (44), Expect = 6.546e-19 Identity = 14/36 (38.89%), Postives = 20/36 (55.56%), Query Frame = 3 Query: 984 LREPTQEDPREVAAGKADLNTWAGKGK---WVDGEG 1082 +R+ +QED RE A + +LN A G V+G G Sbjct: 232 MRDLSQEDERESRAAQWELNYVALDGNIGCMVNGAG 267
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_BEUC1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=sucC PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 7.427e-19 Identity = 65/222 (29.28%), Postives = 113/222 (50.90%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVV-KSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVV--DGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 +++ EYQ ++ K+G+ V G+ +VDE + A + +VV K+Q+ GGRG GGV + + EE + A ++LG + +G V +V + E S+ E YF+++LDR + + +GG IE LA + P + +V +D GI AA++V G A VA + ++KL+ ++ D TL+E +PL T+ +++ Sbjct: 1 MDLFEYQARDVFEKHGVPVLGGIVATTVDEARAAAETLTSGAGSVVVVKAQVKTGGRGKA-------GGVKLARSPEEAAEAAEQILGMDI-------KGHTVHRVMIAEGASIAEEYYFSVLLDRANRSYLAMASVEGGVEIEQLAVERPEALARVAVDPLVGIDAAKAAEIVAAAGFADDVA--GAVADVIQKLWTVYDAEDATLVEVNPLVRTTDGRVI 206
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_HALMA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haloarcula marismortui GN=sucC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 9.700e-19 Identity = 71/222 (31.98%), Postives = 115/222 (51.80%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQD-AFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVV--DGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 + +HEYQ ++ A GI P +VDE A ++ +P + +K+Q+ GGRG GG+ +V+ KEE + A ++G L +G VSKV + E + VNE+Y + +DR P+ + +KGG +IE++AE+ P+ I + ID G+ A KVV G+ +VA ND + LY+L+ + D E +PL TS +++ Sbjct: 1 MRLHEYQAKQVFADAGIPTPASQLAETVDEAVDAAEEIGYP----VAIKAQVHVGGRGKA-------GGIKLVESKEEAREAAEDIIGMDL-------KGYHVSKVLVEEAVDFVNELYVGVTMDRGEGRPVAMVSTKGGVNIEEVAEEDPDAIAREHIDPAFGMHPFQARKVVYEAGVDREVA--NDVASVLTTLYQLWDDRDGADTEINPLMITSDDEVI 202
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_CHLPN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlamydia pneumoniae GN=sucC PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 9.700e-19 Identity = 64/219 (29.22%), Postives = 108/219 (49.32%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEE-VEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 +++HEYQ +L+A Y + +P V+S +E + I + D VVK Q+ AGGRG GGV + K + K+LG + QT V KV + +++ E Y A+++DRK P+++ GG IE++A P I+ +P+ + I + + + + ++ +KKL K F E+D +LLE +PL T +L+ Sbjct: 1 MHLHEYQAKDLLASYDVPIPPYWVVSSEEEGELLITKSGLD--SAVVKVQVHAGGRGK-------HGGVIVAKSSAGILQAVAKLLGMHFTSNQTADGFLPVEKVLISPLVAIQREYYVAVIMDRKHRCPVLMLSKAGGMDIEEVAHSSPEQILTLPLTSYGHIYSYQLRQATKFMEWEGEVMHQGVQLIKKLAKCFYENDVSLLEINPLVLTLEGELL 210
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_NATPD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=sucC PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.655e-18 Identity = 63/220 (28.64%), Postives = 111/220 (50.45%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQD-AFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 + +HEYQ + A GI VP+ ++VDE +A D +P + +K+Q+ GGRG GG+ +V+ +E + A ++LG L +G V +V + + +E+Y + +DR P+ + ++GG +IE++AE+ P+ IV+ ID G+ A K A ND + +LY+L+ + D T +E +PL T +++ Sbjct: 1 MKLHEYQAKGVFADAGIPVPESTLASTVDEAVEAADDIGYP----VAIKAQVQVGGRGKA-------GGIKLVENADEAREAADEILGMDL-------KGLHVDRVLVEAAVDFTDELYVGVTMDRAAGKPVAMVSTRGGVNIEEVAEEDPDAIVREHIDPAFGMHPFQARKAAFEAGVDRAVANDVASILTQLYELWADKDATEIEVNPLMVTDDDEVI 202
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_CHLMU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlamydia muridarum GN=sucC PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.822e-18 Identity = 66/221 (29.86%), Postives = 112/221 (50.68%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA--PKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 +++HEYQ +L+ Y + +P S+ E + AIQ + VVK+Q+ AGGRG GGV + + E++ ++L + QT V+KV + + + E Y AI++DRK P+I+ GG IE++AEK P++++K+ + I + + VADR + I ++KL + F ++D +LLE +PL T L+ Sbjct: 1 MHLHEYQAKDLLTSYQLPIPPYHVATSLSEAEVAIQAE--QWRSGVVKAQVHAGGRGKN-------GGVIVARSPEDLLAATDRLLHMQFSSNQTAGLSLPVNKVLISPLVEIALEYYIAIVIDRKHRCPVIMLSKSGGIDIEEIAEKQPDLLLKIALPSSGKIYAYQLRHIAKFMEWDKLVADRGNHI--IRKLLQCFYDNDASLLEINPLVLTKDGDLI 210
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC2_ARCFU (Succinyl-CoA ligase [ADP-forming] subunit beta-2 OS=Archaeoglobus fulgidus GN=sucC2 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.822e-18 Identity = 61/212 (28.77%), Postives = 107/212 (50.47%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAET 903 + +HEYQ ++ +K+GI V +G SV++V+ ++ ++V+KSQ+L GGRG G+K + EE + A +M G +L +G IV K+Y+ E + + EMY + +DR G I S GG IE++A K+P I ++ ++ G+ D +++ + +K LY++ + L+E +PL T Sbjct: 1 MRLHEYQAKQIFSKHGIRVARGELATSVEDVRGIAEEL---GGKVVLKSQVLVGGRGKA---GGIKKAYSV---EEAVEKAKEMFGSVL-------KGHIVEKIYVEEMIEVQREMYAGLTIDRANKGIAAILSSVGGMDIEEIAVKHPEKIARIAVNPKWGLWDYQIRELLLNSQMPREYWKEVASILKTLYRIMVHYEAELVEINPLVVT 196
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC1_ARCFU (Succinyl-CoA ligase [ADP-forming] subunit beta-1 OS=Archaeoglobus fulgidus GN=sucC1 PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 3.166e-18 Identity = 63/213 (29.58%), Postives = 107/213 (50.23%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAET 903 + +HE+Q ++ AK+GI VP+G S +E +K + +VVK+QIL GGRG GGV EE +++A K+LG + +G V KV + E+L++ E Y ++D+ + P +I GG +E++A K+P+ I ++ D G+ D + K + + + + +KKL + + L E +PLA T Sbjct: 1 MRLHEHQAKQIFAKHGIRVPRGEVATSPEEAEKIAEKL---GGRVVVKAQILVGGRGKA-------GGVKKANSPEEAKEVAKKILGMTI-------KGHRVEKVLVEEQLNMRKEYYVGYVVDKSSRLPTVIFSRMGGMDVEEIAAKHPDAIHRIYFDPLWGLKDYEVRKALFRAGFEGEEFKQMFDIIKKLVDIAFAYEAELTEINPLAVT 196 HSP 2 Score: 21.1718 bits (43), Expect = 3.166e-18 Identity = 10/20 (50.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 984 LREPTQEDPREVAAGKADLN 1043 LRE T+EDP E A +N Sbjct: 223 LREATEEDPLEREARLKGIN 242 The following BLAST results are available for this feature:
BLAST of DY262816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262816 ID=DY262816; Name=DY262816; organism=Citrus clementina; type=EST; length=1311bpback to top |