DY262816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_SALAI (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Salinispora arenicola (strain CNS-205) GN=sucC PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.120e-17 Identity = 68/215 (31.63%), Postives = 106/215 (49.30%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAET 903 ++++EYQG +L ++G+ V G VA+ E +AI + +VVK+Q+ GGRG GGV + + +E A +LG + +G V KV + + E YF+ +LDR + I GG IE +A + P +VK PID G+ A +++ G +V D+ A+E L+K F D TL+E +PLA T Sbjct: 1 MDLYEYQGRDLFERHGLPVLAG-GVATTPEEARAIAERLGGR--VVVKAQVKVGGRGKA-------GGVKLAEGADETVARATDILGMDI-------KGHTVHKVMITVTADVAEEYYFSYLLDRANRTFLCIASVAGGMDIEQVAAETPEKVVKAPIDANTGVDAAMARQIITRAGFPAEVVDQ--AVEVAVDLWKAFVAEDATLVEVNPLART 196
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_CHLSY (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=sucC PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.075e-17 Identity = 65/212 (30.66%), Postives = 110/212 (51.89%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKG-LAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQV-KKLYKLFCESDCTLLENHPL 894 + +HEYQ +L+A++GI V G +AV V+ A + P +VVK+Q+ GGRG GGV + + E E +A ++LG + +G V KV + E +S E+Y + +LDR + ++I ++GG IE++A+ P+ I+K+P G+ D A ++ + + Q+ LY+ F E D +L+E +PL Sbjct: 1 MKLHEYQARDLLARFGIPVTGGGVAVTPVEARTIAAEIGGP----VVVKAQVHVGGRGKA-------GGVKLAQTPTEAEQVARQILGMNI-------KGLTVEKVLVAEAVSYKRELYLSAILDRGSKRVMMIASAEGGVEIEEVAKTNPDAIIKIPAHPTMGLLDFQARELAFRIGLNDGKQARQFAQIASALYRAFVECDASLVEINPL 194
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_CHLAA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=sucC PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.075e-17 Identity = 65/212 (30.66%), Postives = 110/212 (51.89%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKG-LAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQV-KKLYKLFCESDCTLLENHPL 894 + +HEYQ +L+A++GI V G +AV V+ A + P +VVK+Q+ GGRG GGV + + E E +A ++LG + +G V KV + E +S E+Y + +LDR + ++I ++GG IE++A+ P+ I+K+P G+ D A ++ + + Q+ LY+ F E D +L+E +PL Sbjct: 1 MKLHEYQARDLLARFGIPVTGGGVAVTPVEARTIAAEIGGP----VVVKAQVHVGGRGKA-------GGVKLAQTPTEAEQVARQILGMNI-------KGLTVEKVLVAEAVSYKRELYLSAILDRGSKRVMMIASAEGGVEIEEVAKTNPDAIIKIPAHPTMGLLDFQARELAFRIGLNDGKQARQFAQIASALYRAFVECDASLVEINPL 194
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_ROSCS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=sucC PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 5.322e-17 Identity = 62/211 (29.38%), Postives = 106/211 (50.24%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQV-KKLYKLFCESDCTLLENHPL 894 + +HEYQ +++A+YG+ V G VA+ +AI + +VVK+Q+ GGRG GGV + E+ E +AG++LG + +G V KV + E ++ E+Y ++DR + +++ ++GG IE++A P IVKV G+ D A + G+ A + Q+ LY+ + + D +L E +PL Sbjct: 1 MKLHEYQARDILARYGVPVTGG-GVATTPAEARAIAEQIGGR--VVVKAQVFVGGRGKA-------GGVKLADTPEQAEQVAGQILGMNI-------KGLTVEKVLVAEAITYEREIYLGAIMDRASRRIVMMASAEGGVEIEEVARTNPEAIVKVAAHPMLGLLDFQARDLAYGIGLTDAKQARQFAQIATALYRAYMDVDASLAEINPL 194
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_CORGL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Corynebacterium glutamicum GN=sucC PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 9.079e-17 Identity = 61/221 (27.60%), Postives = 113/221 (51.13%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 +++ EYQ +L +G+ V KG+ ++ + +KA ++ VVK+Q+ GGRG GGV + + D A +LG + +G V++V + + + E YF+I+LDR + + +GG IE LA++ P + KV +D GI ++ A ++V G +VA++ I + K+++++ E + TL+E +PL T ++ Sbjct: 1 MDLFEYQARDLFETHGVPVLKGIVASTPEAARKAAEEI---GGLTVVKAQVKVGGRGKA-------GGVRVAPTSAQAFDAADAILGMDI-------KGHTVNQVMVAQGADIAEEYYFSILLDRANRSYLAMCSVEGGMEIEILAKEKPEALAKVEVDPLTGIDEDKAREIVTAAGFETEVAEK--VIPVLIKIWQVYYEEEATLVEVNPLVLTDDGDVI 202
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_MYCVP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=sucC PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.186e-16 Identity = 62/220 (28.18%), Postives = 108/220 (49.09%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 +++ EYQ EL AK+ + G S ++ K ++ K ++VK+Q+ GGRG K+G G + E+ A +LG + +G IV K+ + E + E Y + +LDR + + +GG IE++A P + KVP+D G+ + A ++ + L +V D A + KL+++F + D TL+E +PL T Q++ Sbjct: 1 MDLFEYQAKELFAKHNVPTTPGRVTESAEDAKAIAEEI---GKPVMVKAQVKVGGRG----KAG--GVKYAATPEDALTHAQNILGLDI-------KGHIVKKLLVAEASDIAEEYYISFLLDRANRTYLAMCSVEGGMEIEEVAATKPERLAKVPVDAVKGVDEAFAREIAEKGHLPAEVLDA--AAVTIAKLWEVFVKEDATLVEVNPLVRTPDDQIL 202
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_HALLT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=sucC PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.549e-16 Identity = 60/220 (27.27%), Postives = 109/220 (49.55%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQD-AFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 + +HE+Q + A GI VP +VDE A+ + +P +K+Q+ GGRG GG+ I ++E E A ++LG L +G V ++ + + + V+E+Y + +DR P+++ ++GG +IE++AE+ P+ I + +D G+ A KVV D + LY L+ E+D + +E +P+ TS + ++ Sbjct: 1 MKLHEHQAKTIFADAGIPVPDSRLATTVDEALDAVDEIGYP----AAIKAQVHVGGRGKA-------GGIKIATDRDEAEQYAEEILGMDL-------KGYTVDQILVEQGVDFVDELYVGVTMDRGEGQPVLMVSTEGGVNIEEVAEENPDAIAREHVDPAFGLHPYQARKVVYEAGVDADVALDVASILTTLYDLYEENDASEIEVNPVMITSDRDVI 202
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_ARTAT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Arthrobacter aurescens (strain TC1) GN=sucC PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.549e-16 Identity = 61/219 (27.85%), Postives = 104/219 (47.49%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 +++ EYQ ++ +G+ V G+ + +E K A + VVK+Q+ GGRG GGV + K EE + + +LG + +G V+KV + + + E YF+++LDR + + +GG IE LA + P + K+ ID GI A ++V R + + KL+ +F + D TL+E +PL T ++V Sbjct: 1 MDLFEYQARDMFEAHGVPVLAGIVAHTPEEAKAAAEKI---GGVTVVKAQVKVGGRGKA-------GGVKVAKTAEEALEHSTNILGMDI-------KGHTVNKVMIAQGADIAEEFYFSVLLDRANRNYLAMCSVEGGMEIEQLAVERPEALAKIAIDPAVGIDQAKADEIVAAAGFAEELRGKVADVILKLWDVFKKEDATLVEVNPLVRTGAGEIV 202
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_THETH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Thermus thermophilus GN=sucC PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.023e-16 Identity = 62/219 (28.31%), Postives = 108/219 (49.32%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 +N+HEYQ E++A+YG+ VP G + +E K+ ++ K +V+K+Q+ GGRG GGV + +E + A +LG + +G V KV + E + + E Y ++LDR +++ +GG IE++A + P I K ID G +A ++V A + N + + LY+ + D ++ E +PL T+ +V Sbjct: 1 MNLHEYQAKEILARYGVPVPPGKVAYTPEEAKRIAEEF---GKRVVIKAQVHVGGRGKA-------GGVKLADTPQEAYEKAQAILGMNI-------KGLTVKKVLVAEAVDIAKEYYAGLILDRAKKRVVLMLSKEGGVDIEEVAAERPEAIHKFWIDPHKGFRPFEAREMVK-RAGLEGNLNKLAQVLVALYRAYEGVDASIAEINPLVVTTDGGIV 201
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_BACFR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacteroides fragilis GN=sucC PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 3.450e-16 Identity = 61/213 (28.64%), Postives = 98/213 (46.01%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAET 903 + +HEYQ E+ + YGI V + + D A + + +K+Q+L GGRG GGV + + +V A +L + +G V+K+ L E +++ E Y + +DR T +I + GG IE++A + P I++ ID G+ D A K L + N ++ LYK F E D +L E +PL T Sbjct: 1 MKVHEYQAKEIFSTYGIPVERHALCHTADGAVAAYHRMGVNR--VAIKAQVLTGGRGKA-------GGVKLANNDRDVYQYAQTILEMTI-------KGYPVTKILLSEAVNIAAEYYISFTIDRNTRSVTLIMSAAGGMDIEEVARQSPEKIIRCSIDPLIGVPDYLAHKFAFSLFEQAEQANRMATIIQDLYKAFIEKDASLAEINPLVLT 197 The following BLAST results are available for this feature:
BLAST of DY262816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262816 ID=DY262816; Name=DY262816; organism=Citrus clementina; type=EST; length=1311bpback to top |