DY262816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_ACIBL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acidobacteria bacterium (strain Ellin345) GN=sucC PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 4.792e-34 Identity = 86/219 (39.27%), Postives = 127/219 (57.99%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDH-KELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQL 918 + IHEYQG ++ KYG+ VP+G V + +E ++ D D K +VVK+QI AGGRG G GGV I K +E LAGK+LG L+T QTGP+GK V ++ + E L + E+Y +I+LDR P+ + + GG IE++A K PN I+K I+ G+ A K+ L K A++ ++ LYK + E+D +L+E +P TS +L Sbjct: 1 MKIHEYQGKAILRKYGVAVPRGEMVTTREEAERVANDLMHDGAKGVVVKAQIHAGGRGKG-------GGVKIAKSVDEAGQLAGKILGMTLITHQTGPEGKKVQRLLIEETLPIERELYLSIVLDRSNGKPVFMASAAGGMEIEEVAAKDPNAIIKEWIEPGYGLGAFQARKIAFKLGLKPELIGQAVKFMQALYKTYDETDASLVEINPFITTSDNRL 212
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCB_TRIVA (Succinyl-CoA ligase [GDP-forming] subunit beta, hydrogenosomal OS=Trichomonas vaginalis PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 6.258e-34 Identity = 86/240 (35.83%), Postives = 133/240 (55.42%), Query Frame = 1 Query: 262 RRLNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTF-KSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLVXXXXXXXXXXXXXXRQKE 975 R NI E+Q E+ AKY + L S +E +A + + V+K+Q+ GGRG G + ++G K GVH VK +E +A +MLG LVTKQTG G + V L + + + E+YFAI+LDR+T P++I ++GG IE++A +P I K +D GIT+E A + L ++ + +++KL+KLF SD T +E +PLAET+ +++ RQK+ Sbjct: 8 RNFNILEWQSKEICAKYNVAAGINLVARSPEEAAEAFRKM--NLPAAVIKAQVYCGGRGKGHWLETGFKSGVHFVKSADEAAKIAKEMLGHHLVTKQTGKDGLLCQAVMLSDPVEVKRELYFAILLDRQTQSPVVIASTEGGVEIEEVAAHHPEKIHKFVLDGVEGITEEVAKNISTKLGLTGKAYDNGVVEMQKLWKLFVGSDATQVEVNPLAETTDGRIITVDSKFNFDDSAHYRQKQ 245
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_ACICJ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acidiphilium cryptum (strain JF-5) GN=sucC PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.121e-33 Identity = 84/221 (38.01%), Postives = 124/221 (56.11%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGL--KGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 +NIHEYQ EL+ YG+ V G + +E +A + VVKSQI AGGRG G FK KGGV + K EEV A MLG LVTKQTGP G++V +VY+ + E+Y ++++DR + +I+ ++GG IE++AEK+P I++V +D +GI+ A ++ GL + V +YK F DC ++E +PL T ++V Sbjct: 1 MNIHEYQAKELLKSYGVAVLDGHVAWTGEEAAEAARKL--PGPVYVVKSQIHAGGRGAGHFKDDPEGKGGVRLAKSPEEVAAAAEAMLGNTLVTKQTGPAGRVVRRVYVEAGCDIKRELYLSLLVDRAKSEIVIMASTEGGMEIEEVAEKHPEKILRVAVDPASGISGFHARRLGFGLGLDATQMKAFAKFVNAMYKAFVALDCAIVEINPLVVTGAGEVV 219 HSP 2 Score: 25.7942 bits (55), Expect = 1.121e-33 Identity = 15/36 (41.67%), Postives = 20/36 (55.56%), Query Frame = 3 Query: 984 LREPTQEDPREVAAGKADLNTWAGKGK---WVDGEG 1082 LR+ +EDP+E+ A K LN A G V+G G Sbjct: 241 LRDEAEEDPKELEAAKHSLNYVALDGSIGCMVNGAG 276
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_BACLD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=sucC PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 1.461e-33 Identity = 87/237 (36.71%), Postives = 127/237 (53.59%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLVXXXXXXXXXXXXXXRQKE 975 +NIHEYQG E++ KYG+ VP+G + DE KA + VVK+QI AGGRG GGV I K KEEV+ A ++LG+ LVT QTGP G+ + ++ + E + E Y ++LDR T+ +++ +GGT IE++AEK P IVK ID G+ A K+ + A++ + LYK F E DC++ E +PL T +++ RQK+ Sbjct: 1 MNIHEYQGKEVLRKYGVAVPEGKVAFTADEAVKAAEAL--SSSVYVVKAQIHAGGRGKA-------GGVKIAKSKEEVKAYAEELLGKTLVTHQTGPDGQQIKRLLIEEGCDIKKEYYVGLVLDRATSRIVLMASEEGGTEIEEVAEKTPEKIVKEVIDPAVGLQSYQARKIAFAINIPKELVGQAVKFMMGLYKAFTEKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRQKD 228 HSP 2 Score: 24.6386 bits (52), Expect = 1.461e-33 Identity = 10/22 (45.45%), Postives = 15/22 (68.18%), Query Frame = 3 Query: 978 LALREPTQEDPREVAAGKADLN 1043 L R+ +EDP+E+ A K DL+ Sbjct: 230 LEYRDLDEEDPKEIEASKYDLS 251
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_MARMM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Maricaulis maris (strain MCS10) GN=sucC PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 3.106e-33 Identity = 86/213 (40.38%), Postives = 124/213 (58.22%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL 894 +NIHE+Q ++ +G V +G+A+ S DE A D P VVKSQI AGGRG G FK S KGGV + KE+V A +MLG LVT QTGP+GK V+++Y+ + + E+Y +++++R+T + ++GG IE++A + P I + ID G+TD AA V D L + R D + K LY FCE D ++LE +PL Sbjct: 1 MNIHEHQAKAVLKSFGAPVAEGVAIFSADEAAAAA-DQLPGPL-WVVKSQIHAGGRGKGKFKELGSDAKGGVRLAFSKEDVVKNAKEMLGNTLVTHQTGPEGKRVNRLYIEDGADIATELYCSLLVNRETGQVAFVVSTEGGMDIEEVAAETPEKIQTIDIDPSTGVTDASAAAVCDALKLEGQAREDMMGLAKILYTAFCEKDMSMLEINPL 211
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_SPHWW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=sucC PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 4.201e-33 Identity = 88/223 (39.46%), Postives = 125/223 (56.05%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFK---SGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETS-GKQLV 921 +NIHEYQ EL+AK+G+ VP G A +VDE +A + VVK+QI AGGRG G FK + KGGV + K +EV+ A MLG LVT QTG GK V+++Y+ + + +E Y ++++DRKT +I ++GG IE +A P I + ID G V L K A++ ++LY F +D ++LE +PL ET+ GK LV Sbjct: 1 MNIHEYQAKELLAKFGVAVPAGHAALTVDEAVEAAKKL--PGPIWVVKAQIHAGGRGKGKFKELPADAKGGVRLSKSIDEVKANAADMLGNTLVTIQTGEAGKQVNRLYVTDGADIKSEYYLSMLVDRKTGRIAMIVSTEGGMDIEQVAHDTPEKIRTIVIDPAEGFQPHHGRAVAFALKLKGDLNKQAVKLAEQLYNAFIATDMSMLEVNPLVETTDGKLLV 221 HSP 2 Score: 28.4906 bits (62), Expect = 4.201e-33 Identity = 12/21 (57.14%), Postives = 16/21 (76.19%), Query Frame = 3 Query: 978 LALREPTQEDPREVAAGKADL 1040 LALR+ T+EDP E+ A + DL Sbjct: 240 LALRDETEEDPAEIEASQYDL 260
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_CHLCH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlorobium chlorochromatii (strain CaD3) GN=sucC PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 5.298e-33 Identity = 82/239 (34.31%), Postives = 131/239 (54.81%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPD--HKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLVXXXXXXXXXXXXXXRQKE 975 +NIHEYQG +++ K+G+ VPKG+ S DE K+A + F + +VVK+QI AGGRG GGV + K EE ++A +M+G L+T QTGP+GK+VS++ + E + + E Y I LDR T+ +++ ++GG IE +AE+ P ++K+ ID G+ A + L + +A+ + LYK + D ++ E +PL TS +++ R KE Sbjct: 1 MNIHEYQGKDILRKFGVTVPKGIVAYSADEAKQAAEQLFAETGSSVVVVKAQIHAGGRGKA-------GGVKLAKSPEEAFEIARQMIGMTLITHQTGPEGKVVSRLLIEEGMGIEKEFYVGITLDRATSRNVLMVSTEGGMEIETVAEETPEKLLKIQIDPLFGMQGFQAREAAFFLGLEGEQFRNAVNFITALYKAYTSIDASVAEINPLVVTSEGKVIALDAKINFDDNALYRHKE 232
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_AZOSB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Azoarcus sp. (strain BH72) GN=sucC PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 5.298e-33 Identity = 84/210 (40.00%), Postives = 121/210 (57.62%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL 894 + IHEYQ E++ KYG+ P+G+ SVDE KA ++ K VVK+QI AGGRG G GGV + K +EV LAG++LG LVT QTGP+G+ V ++ + E + E Y A + DR T ++ S+GG IE++A P I+KV +D G+TD A ++ G+ A A++ KKLY + E+D +L E +PL Sbjct: 1 MKIHEYQAKEVLRKYGVVTPRGIPCFSVDEAVKAAEEL--GGKIWVVKAQIHAGGRGKG-------GGVKLGKSLDEVRTLAGQILGMQLVTHQTGPEGQKVRRLLIEEGADIKKEYYVAALTDRATQKVAMMASSEGGMDIEEVAHNTPEKIIKVFVDPLAGLTDAQAIELAKGIGVPEASIPQAVDTFKKLYTCYMETDASLAEINPL 201
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_ERYLH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Erythrobacter litoralis (strain HTCC2594) GN=sucC PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 5.472e-33 Identity = 88/223 (39.46%), Postives = 125/223 (56.05%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDE-VKKAIQDAFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 +N+HEYQ EL+AKYGI +P G A +V+E V A Q P + VVK+QI AGGRG G FK KGGV + K E+VE A +MLG LVT QTG +GK V+++Y+ + + + +E Y ++++DR + +I ++GG IE++A P I + ID G V L A + K+LY F + DC +LE +PL ET QL+ Sbjct: 1 MNLHEYQAKELLAKYGIGIPAGHAALTVEEAVAGAKQLPGPLY---VVKAQIHAGGRGKGKFKELGPDAKGGVRLAKSIEDVEASAREMLGNTLVTVQTGEEGKQVNRLYVTDGVDIASEYYLSMVVDRASGRVGMIVSTEGGMDIEEVAHSTPEKITTITIDPAQGFMPHHGRAVAFALKLSGDLNKQAQKLAKQLYTAFMDLDCEMLEINPLVETEDGQLL 220 HSP 2 Score: 25.0238 bits (53), Expect = 5.472e-33 Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 3 Query: 984 LREPTQEDPREVAAGKADL 1040 +R+ T+EDP EV A + DL Sbjct: 242 MRDETEEDPAEVEASEYDL 260
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_RHOCS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=sucC PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 6.919e-33 Identity = 84/221 (38.01%), Postives = 126/221 (57.01%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGL--KGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 +NIHEYQ L+ KYG+ VP+G +++E + ++ VVKSQI AGGRG G FK KGGV +VK ++V MLG++LVTKQTGP+GK V ++Y+ E + E+Y +++LDR T+ I+ ++GG IE++A P IVKV ID G+ A KV L + + + +YK F + D +L+E +PL T +++ Sbjct: 1 MNIHEYQAKSLLKKYGVAVPRGGVAYTLEEARAVAKEL--GGPVWVVKSQIHAGGRGAGRFKDDPNGKGGVRVVKSIDDVVASTDAMLGKVLVTKQTGPEGKEVKRIYVEEGADIKRELYLSMLLDRATSRITIVASTEGGMEIEEVAHTSPEKIVKVAIDPVQGLQGYHARKVAFALGLEGKQVGACTKFLLGMYKAFTDLDMSLVEVNPLVVTGSGEVL 219 The following BLAST results are available for this feature:
BLAST of DY262816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262816 ID=DY262816; Name=DY262816; organism=Citrus clementina; type=EST; length=1311bpback to top |