DY262816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_CAUCR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Caulobacter crescentus GN=sucC PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.999e-32 Identity = 79/221 (35.75%), Postives = 119/221 (53.85%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQL 918 +NIHE+Q ++A++G VP+G A + DE A + VVKSQI AGGRG G F+ KGGV +VK EEV A +MLG++LVT QTGP+GK V+++Y+ E ++ E Y ++++DR ++ ++ ++GG IED+A P I ID G+ + L +A + +LY F D +LE +PL T+ L Sbjct: 1 MNIHEHQAKAVLAEFGAPVPRGFAAFTPDEAAAAAEKL--GGPVFVVKSQIHAGGRGKGKFEGLGPDAKGGVRVVKSVEEVRSNAEEMLGRVLVTHQTGPKGKQVNRLYIEEGAAIAKEFYLSLLVDRASSKVSVVASTEGGMDIEDVAHSTPEKIHTFTIDPATGVWPTHHRALAKALGLTGGLAKEAASLLNQLYTAFMAKDMAMLEINPLIVTADDHL 219 HSP 2 Score: 28.8758 bits (63), Expect = 9.999e-32 Identity = 17/36 (47.22%), Postives = 23/36 (63.89%), Query Frame = 3 Query: 981 ALREPTQEDPREVAAGKADLNTWAGKGKWVDGE-GC 1085 ALR+ ++EDP+E+ A K DL A +DGE GC Sbjct: 241 ALRDESEEDPKEIEASKYDLAYIA-----LDGEIGC 271
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_CAUCN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=sucC PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.999e-32 Identity = 79/221 (35.75%), Postives = 119/221 (53.85%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKS---GLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQL 918 +NIHE+Q ++A++G VP+G A + DE A + VVKSQI AGGRG G F+ KGGV +VK EEV A +MLG++LVT QTGP+GK V+++Y+ E ++ E Y ++++DR ++ ++ ++GG IED+A P I ID G+ + L +A + +LY F D +LE +PL T+ L Sbjct: 1 MNIHEHQAKAVLAEFGAPVPRGFAAFTPDEAAAAAEKL--GGPVFVVKSQIHAGGRGKGKFEGLGPDAKGGVRVVKSVEEVRSNAEEMLGRVLVTHQTGPKGKQVNRLYIEEGAAIAKEFYLSLLVDRASSKVSVVASTEGGMDIEDVAHSTPEKIHTFTIDPATGVWPTHHRALAKALGLTGGLAKEAASLLNQLYTAFMAKDMAMLEINPLIVTADDHL 219 HSP 2 Score: 28.8758 bits (63), Expect = 9.999e-32 Identity = 17/36 (47.22%), Postives = 23/36 (63.89%), Query Frame = 3 Query: 981 ALREPTQEDPREVAAGKADLNTWAGKGKWVDGE-GC 1085 ALR+ ++EDP+E+ A K DL A +DGE GC Sbjct: 241 ALRDESEEDPKEIEASKYDLAYIA-----LDGEIGC 271
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_PARL1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=sucC PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.303e-31 Identity = 82/220 (37.27%), Postives = 125/220 (56.82%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDE-VKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 +NIHEYQ ++AKYG+ VP G A + +E V KA + P VVK+QI AGGRG GGV +VK ++V+ A +++G LVT QTGP GK V+++Y+ + S+ E+Y +I++DR T+ I ++GG IE++A+K P I+ +D +GI+ KV L + + ++KLYK F D ++LE +PL T L+ Sbjct: 1 MNIHEYQAKAVLAKYGVPVPSGHAAFTPEEAVAKAKELGGP---VWVVKAQIHAGGRGKA-------GGVKVVKSLDDVKKEATRLIGSTLVTHQTGPDGKEVNRLYIEDGSSISRELYLSILVDRATSRVSFIVSTEGGMDIEEVAKKTPEKILSFSVDPASGISGFHGRKVAYALGLEGDQVKQGVALIEKLYKAFVTEDMSMLEINPLVVTGEGNLL 210 HSP 2 Score: 29.261 bits (64), Expect = 1.303e-31 Identity = 18/36 (50.00%), Postives = 21/36 (58.33%), Query Frame = 3 Query: 984 LREPTQEDPREVAAGKADLNTWAGKGK---WVDGEG 1082 LR+ T+EDP EV A K DLN GK V+G G Sbjct: 232 LRDLTEEDPAEVEASKYDLNYIKLDGKIGCMVNGAG 267
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_GEOTN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Geobacillus thermodenitrificans (strain NG80-2) GN=sucC PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.303e-31 Identity = 77/213 (36.15%), Postives = 120/213 (56.34%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAET 903 +NIHEYQ E++ YG++VP G +VDE +A + VVK+QI AGGRG GGV + K EEV A ++LG++LVT QTGP+GK V ++ + E + E Y +++DR T+ +++G +GGT IE++A K P I K +D G+ A ++ + N A++ + LY++F + DC++ E +PL T Sbjct: 1 MNIHEYQAKEILRSYGVSVPNGRVAFTVDEAVEAAKAL--GTSVCVVKAQIHAGGRGKA-------GGVKVAKSLEEVRTYASELLGKVLVTHQTGPEGKEVKRLLIEEGCDIQKEYYIGLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEKIFKEYVDPAVGLQAFQARRLAFNINIPKKLVNQAVKFMMGLYQVFVDKDCSIAEINPLVVT 204 HSP 2 Score: 26.5646 bits (57), Expect = 1.303e-31 Identity = 16/35 (45.71%), Postives = 20/35 (57.14%), Query Frame = 3 Query: 987 REPTQEDPREVAAGKADLNTWAGKGK---WVDGEG 1082 R+ +EDP+EV A K DLN A G V+G G Sbjct: 233 RDLDEEDPKEVEASKYDLNYIALDGNIGCMVNGAG 267
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_GEOSW (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Geobacillus sp. (strain WCH70) GN=sucC PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.303e-31 Identity = 76/213 (35.68%), Postives = 121/213 (56.81%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAET 903 +NIHEYQ E++ YG++VP G +V+E +A ++ VVK+QI AGGRG GGV + K +EV A ++LG++LVT QTGP+GK V ++ + E + E Y +++DR T+ +++G +GGT IE++A K P I K ID G+ A ++ + N A++ + LY++F + DC++ E +PL T Sbjct: 1 MNIHEYQAKEILRNYGVSVPNGRVAFTVEEAVEAAKEL--GSPVCVVKAQIHAGGRGKA-------GGVKVAKSLDEVRTYASELLGKVLVTHQTGPEGKEVKRLLIEEGCDIKKEYYIGLVVDRATSRVVLMGSEEGGTEIEEVAAKTPEKIFKEYIDPAVGLQAFQARRLAFNINIPKELVNQAVKFMMGLYQVFVDKDCSIAEINPLVVT 204 HSP 2 Score: 27.335 bits (59), Expect = 1.303e-31 Identity = 17/38 (44.74%), Postives = 21/38 (55.26%), Query Frame = 3 Query: 978 LALREPTQEDPREVAAGKADLNTWAGKGK---WVDGEG 1082 L R+ +EDP+EV A K DLN A G V+G G Sbjct: 230 LEYRDLDEEDPKEVEASKYDLNYIALDGNIGCMVNGAG 267
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_POLNS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Polynucleobacter necessarius (strain STIR1) GN=sucC PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.305e-31 Identity = 84/217 (38.71%), Postives = 126/217 (58.06%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL-AETSGK 912 + IHEYQG EL+ ++ + VP G+ SVDE KA + VVK+QI AGGRG G GGV + K +EV+ A ++LG L T QTGP+G+ V+++ + + + E YF+I+ DR T +I+ S+GG IE++AE +P I+KV +D G+TD D + G+ A A + K LYK + ++D +L+E +PL E +GK Sbjct: 1 MKIHEYQGKELLRQFNVPVPNGIPAFSVDEAVKAAEKL--GGPVWVVKAQIHAGGRGKG-------GGVKLAKSMDEVKRYASEILGMQLKTHQTGPEGQKVNRLLIEDGADIKKEYYFSIVTDRGTQKNVIMASSEGGMDIEEVAESHPEKIIKVFVDPMVGLTDADCDIIAKGIGVPEASIPMARDVFKNLYKTYWDTDASLVEINPLILEGNGK 208
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_JANMA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Janthinobacterium sp. (strain Marseille) GN=sucC PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.305e-31 Identity = 87/223 (39.01%), Postives = 124/223 (55.61%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKK----LYKLFCESDCTLLENHPLAETSGKQLV 921 +NIHEYQG E++ KYG+ PKG SVDE +A + K VVK+QI AGGRG G GGV + K +EV A +LG LVT QTGP+G++V ++ + E + E+Y +++DR + ++ S+GG IE +AE P I KV ID G+ D +A D +A K+ +I Q + LYK F E+D +L E +PL T ++V Sbjct: 1 MNIHEYQGKEILRKYGVTTPKGFPCFSVDEAVQAAEKL--GGKVWVVKAQIHAGGRGKG-------GGVKVAKSLDEVRKYANDILGMTLVTHQTGPEGRLVKRLLIEEGADIKKELYVGMVVDRGSQRVALMASSEGGMDIEHVAEHTPEKIHKVFIDPVKGLLDSEA----DDIARKIGVPEGSIGQARAFMQGLYKAFDETDASLAEINPLIVTGDDRIV 210
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_POLSQ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=sucC PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.704e-31 Identity = 84/217 (38.71%), Postives = 126/217 (58.06%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPL-AETSGK 912 + IHEYQG EL+ ++ + VP G+ SVDE KA + VVK+QI AGGRG G GGV + + +EV+ A ++LG L T QTGP+G+ V+++ + + + E YF+I+ DR T +I+ S+GG IE++AE +P I+KV +D G+TD D V G+ A A + K LYK + ++D +L+E +PL E +GK Sbjct: 1 MKIHEYQGKELLRQFNVPVPNGIPAFSVDEAVKAAEKL--GGPVWVVKAQIHAGGRGKG-------GGVKLARSMDEVKKYASEILGMQLKTHQTGPEGQKVNRLLIEDGADIKKEYYFSIVTDRGTQKNVIMASSEGGMDIEEVAESHPEKIIKVFVDPMVGLTDADCDIVAKGIGVPEASIPMARDVFKNLYKTYWDTDASLVEINPLILEGNGK 208
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_BORPE (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bordetella pertussis GN=sucC PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.704e-31 Identity = 82/219 (37.44%), Postives = 124/219 (56.62%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 + IHEYQG EL+ ++G+ VP+G+ SVDE A + VVK+QI AGGRG G GGV + + +EV L+ ++LG LVT QTGPQG+ V ++ + E + E Y I+ DR T ++ S+GG IE++A P I+KV +D G+TD +AA++ G+ A A + +KLYK + ++D +L E +PL T ++ Sbjct: 1 MKIHEYQGKELLKQFGVTVPRGIPAFSVDEAVAAAEKL--GGPVWVVKAQIHAGGRGKG-------GGVKLGRSIDEVRQLSSEILGMQLVTHQTGPQGQKVRRLLIEEGADIKKEYYVGIVTDRGTQRVCVMASSEGGMDIEEVAAHSPEKILKVFVDPAAGLTDAEAAELARGIGVPEASVGKAAAEFQKLYKAYWDTDASLAEINPLILTGSGDII 210
BLAST of DY262816 vs. ExPASy Swiss-Prot
Match: SUCC_BORPA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bordetella parapertussis GN=sucC PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.704e-31 Identity = 82/219 (37.44%), Postives = 124/219 (56.62%), Query Frame = 1 Query: 268 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKAIQDAFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLENHPLAETSGKQLV 921 + IHEYQG EL+ ++G+ VP+G+ SVDE A + VVK+QI AGGRG G GGV + + +EV L+ ++LG LVT QTGPQG+ V ++ + E + E Y I+ DR T ++ S+GG IE++A P I+KV +D G+TD +AA++ G+ A A + +KLYK + ++D +L E +PL T ++ Sbjct: 1 MKIHEYQGKELLKQFGVTVPRGIPAFSVDEAVAAAEKL--GGPVWVVKAQIHAGGRGKG-------GGVKLGRSIDEVRQLSSEILGMQLVTHQTGPQGQKVRRLLIEEGADIKKEYYVGIVTDRGTQRVCVMASSEGGMDIEEVAAHSPEKILKVFVDPAAGLTDAEAAELARGIGVPEASVGKAAAEFQKLYKAYWDTDASLAEINPLILTGSGDII 210 The following BLAST results are available for this feature:
BLAST of DY262816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262816 ID=DY262816; Name=DY262816; organism=Citrus clementina; type=EST; length=1311bpback to top |