DY262819
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_HAEIG (Malate dehydrogenase OS=Haemophilus influenzae (strain PittGG) GN=mdh PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.579e-21 Identity = 56/108 (51.85%), Postives = 71/108 (65.74%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNG 328 Y+++KLFGVTTLDV+R++TF H+G+TILPL SQ A +E+I+ LTKR Q+ GTEVV AKAG GSATLSMA A A FA + +KGL+G Sbjct: 138 YDKRKLFGVTTLDVLRSETFVAELKGLNVSRTSVPVIGGHSGVTILPLLSQVQ-YAKWNEEEIEPLTKRIQNAGTEVVNAKAGGGSATLSMAQAAARFARSLVKGLSG 244 HSP 2 Score: 25.409 bits (54), Expect = 2.579e-21 Identity = 12/26 (46.15%), Postives = 16/26 (61.54%), Query Frame = 3 Query: 342 VEWSFVQSTVTELPFFASKVRLGKEG 419 VE ++V+ FF+ VRLGKEG Sbjct: 248 VECTYVEGDGKYARFFSQPVRLGKEG 273
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_PHOLL (Malate dehydrogenase OS=Photorhabdus luminescens subsp. laumondii GN=mdh PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.364e-21 Identity = 55/112 (49.11%), Postives = 68/112 (60.71%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDV 340 Y++ +LFGVTTLDV+R+ TF H+G+TILPL SQ P N D ++ ALTKR Q+ GTEVVEAKAG GSATLSM A A + ++GL G DV Sbjct: 138 YDKNRLFGVTTLDVIRSNTFVAELKGKKPQEIEVPVIGGHSGVTILPLLSQI-PGVNFTDGELAALTKRIQNAGTEVVEAKAGGGSATLSMGQAAARLGLSLVRGLQGESDV 248 HSP 2 Score: 25.0238 bits (53), Expect = 4.364e-21 Identity = 15/45 (33.33%), Postives = 23/45 (51.11%), Query Frame = 3 Query: 342 VEWSFVQSTVTELPFFASKVRLGKEGGRKKFWVWGPLPELPTKGV 476 VE ++V+ FFA VRLGK G ++ + G L + K + Sbjct: 249 VECAYVEGDGKYARFFAQPVRLGKNGVEERLNI-GELSDFEQKAL 292
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_HAES1 (Malate dehydrogenase OS=Haemophilus somnus (strain 129Pt) GN=mdh PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.365e-21 Identity = 55/108 (50.93%), Postives = 71/108 (65.74%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNG 328 Y+++KLFGVTTLDV+R++TF H+G+TILPL SQ A +++I LTKR Q+ GTEVVEAKAG GSATLSMA A A FA + ++GL+G Sbjct: 138 YDKRKLFGVTTLDVLRSETFVAELKGLNVSRIAVPVIGGHSGVTILPLLSQVQ-YAEWEEDEIAPLTKRIQNAGTEVVEAKAGGGSATLSMAQAAARFALSLVQGLSG 244 HSP 2 Score: 26.5646 bits (57), Expect = 4.365e-21 Identity = 13/26 (50.00%), Postives = 16/26 (61.54%), Query Frame = 3 Query: 342 VEWSFVQSTVTELPFFASKVRLGKEG 419 VE ++V+ FFA VRLGKEG Sbjct: 248 VECTYVEGDGKYARFFAQPVRLGKEG 273
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_VIBSL (Malate dehydrogenase OS=Vibrio splendidus (strain LGP32) GN=mdh PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.365e-21 Identity = 53/112 (47.32%), Postives = 67/112 (59.82%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDV 340 Y++++LFG+TTLDV+R++TF H+G+TILPL SQ DE+I ALT R Q+ GTEVVEAKAG GSATLSM A F A +K L G +V Sbjct: 138 YDKRRLFGITTLDVIRSETFVAELKDKDPGDIRVPVIGGHSGVTILPLLSQVEG-VEFTDEEIAALTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLALVKALQGEENV 248 HSP 2 Score: 29.261 bits (64), Expect = 4.365e-21 Identity = 12/26 (46.15%), Postives = 17/26 (65.38%), Query Frame = 3 Query: 342 VEWSFVQSTVTELPFFASKVRLGKEG 419 +E ++V+ PFFA V+LGKEG Sbjct: 249 IECAYVEGEGEHAPFFAQPVKLGKEG 274
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_HAEIE (Malate dehydrogenase OS=Haemophilus influenzae (strain PittEE) GN=mdh PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.679e-21 Identity = 55/108 (50.93%), Postives = 71/108 (65.74%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNG 328 Y+++KLFGVTTLDV+R++TF H+G+TILPL SQ A +++I+ LTKR Q+ GTEVV AKAG GSATLSMA A A FA + +KGL+G Sbjct: 138 YDKRKLFGVTTLDVLRSETFVAELKGLNVSRTSVPVIGGHSGVTILPLLSQVQ-YAKWNEDEIEPLTKRIQNAGTEVVNAKAGGGSATLSMAQAAARFARSLVKGLSG 244 HSP 2 Score: 25.409 bits (54), Expect = 5.679e-21 Identity = 12/26 (46.15%), Postives = 16/26 (61.54%), Query Frame = 3 Query: 342 VEWSFVQSTVTELPFFASKVRLGKEG 419 VE ++V+ FF+ VRLGKEG Sbjct: 248 VECTYVEGDGKYARFFSQPVRLGKEG 273
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_SHEAM (Malate dehydrogenase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=mdh PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.250e-20 Identity = 55/112 (49.11%), Postives = 70/112 (62.50%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDV 340 Y++ +LFGVTTLDV+RA+TF H+G+TILPL SQ N +DE++ ALTKR Q+ GTEVVEAKAG GSATLSM A F + ++GL G +V Sbjct: 138 YDKNRLFGVTTLDVIRAETFVAEAKGVDVASVKVNVIGGHSGVTILPLLSQIEG-VNFSDEEVAALTKRIQNAGTEVVEAKAGGGSATLSMGQAAFRFGMSLIRGLQGEANV 248 HSP 2 Score: 22.7126 bits (47), Expect = 1.250e-20 Identity = 12/29 (41.38%), Postives = 14/29 (48.28%), Query Frame = 3 Query: 342 VEWSFVQSTVTELPFFASKVRLGKEGGRK 428 VE ++V FFA V LGK G K Sbjct: 249 VECAYVDGGSEHAVFFAQPVLLGKNGVEK 277
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_HAEIN (Malate dehydrogenase OS=Haemophilus influenzae GN=mdh PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.250e-20 Identity = 54/108 (50.00%), Postives = 71/108 (65.74%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNG 328 Y+++KLFGVTTLDV+R++TF H+G+TILPL SQ A +++I+ LTKR Q+ GTEV+ AKAG GSATLSMA A A FA + +KGL+G Sbjct: 138 YDKRKLFGVTTLDVLRSETFVAELKGLNVSRTSVPVIGGHSGVTILPLLSQVQ-YAKWNEDEIEPLTKRIQNAGTEVLNAKAGGGSATLSMAQAAARFARSLVKGLSG 244 HSP 2 Score: 25.409 bits (54), Expect = 1.250e-20 Identity = 12/26 (46.15%), Postives = 16/26 (61.54%), Query Frame = 3 Query: 342 VEWSFVQSTVTELPFFASKVRLGKEG 419 VE ++V+ FF+ VRLGKEG Sbjct: 248 VECTYVEGDGKYARFFSQPVRLGKEG 273
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_HAES2 (Malate dehydrogenase OS=Haemophilus somnus (strain 2336) GN=mdh PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.250e-20 Identity = 54/108 (50.00%), Postives = 70/108 (64.81%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNG 328 Y+++KLFGVTTLDV+R++TF H+G+TILPL SQ +++I LTKR Q+ GTEVVEAKAG GSATLSMA A A FA + ++GL+G Sbjct: 138 YDKRKLFGVTTLDVLRSETFVAELKGLNVSRIAVPVIGGHSGVTILPLLSQVQ-YTEWKEDEIAPLTKRIQNAGTEVVEAKAGGGSATLSMAQAAARFALSLVQGLSG 244 HSP 2 Score: 26.5646 bits (57), Expect = 1.250e-20 Identity = 13/26 (50.00%), Postives = 16/26 (61.54%), Query Frame = 3 Query: 342 VEWSFVQSTVTELPFFASKVRLGKEG 419 VE ++V+ FFA VRLGKEG Sbjct: 248 VECTYVEGDGKYARFFAQPVRLGKEG 273
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_ACTPJ (Malate dehydrogenase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=mdh PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.866e-20 Identity = 60/111 (54.05%), Postives = 70/111 (63.06%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKA---NLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNG 328 Y+++KLFGVTTLDVVRAKTF H+G TILPL SQA + + E+I+ALT R Q+ GTEVVEAKAG GSATLSMA +GA FA A K L G Sbjct: 138 YDKRKLFGVTTLDVVRAKTFTSELKEKHVETVKVPVIGGHSGPTILPLLSQALSEGLPLSFTQEEIEALTYRIQNAGTEVVEAKAGGGSATLSMAESGARFAVAVFKALLG 248
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_ACTP7 (Malate dehydrogenase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=mdh PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.866e-20 Identity = 60/111 (54.05%), Postives = 70/111 (63.06%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKA---NLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNG 328 Y+++KLFGVTTLDVVRAKTF H+G TILPL SQA + + E+I+ALT R Q+ GTEVVEAKAG GSATLSMA +GA FA A K L G Sbjct: 138 YDKRKLFGVTTLDVVRAKTFTSELKEKHVETVKVPVIGGHSGPTILPLLSQALSEGLPLSFTQEEIEALTYRIQNAGTEVVEAKAGGGSATLSMAESGARFAVAVFKALLG 248 The following BLAST results are available for this feature:
BLAST of DY262819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262819 ID=DY262819; Name=DY262819; organism=Citrus clementina; type=EST; length=787bpback to top |