DY262819
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_EDWI9 (Malate dehydrogenase OS=Edwardsiella ictaluri (strain 93-146) GN=mdh PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.518e-19 Identity = 52/112 (46.43%), Postives = 69/112 (61.61%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDV 340 YN KLFGVTTLD++R+ TF H+G+TILPL SQ P +L++ ++ LTKR Q+ GTEVVEAKAG GSATL+M A A FA + ++ + G +V Sbjct: 138 YNPNKLFGVTTLDIIRSNTFVGELKHLDPATLDIPVIGGHSGVTILPLLSQI-PGVSLSEREVAELTKRIQNAGTEVVEAKAGGGSATLAMGQAAARFALSLVRAMQGDENV 248
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_CITK8 (Malate dehydrogenase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=mdh PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.518e-19 Identity = 52/112 (46.43%), Postives = 68/112 (60.71%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDV 340 Y++ KLFGVTTLD++R+ TF H+G+TILPL SQ P + ++++ LTKR Q+ GTEVVEAKAG GSATLSM A A F + ++ L G DV Sbjct: 138 YDKNKLFGVTTLDIIRSNTFVAELKGKLPTDVEVPVIGGHSGVTILPLLSQI-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEKDV 248
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_ACTSZ (Malate dehydrogenase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=mdh PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.809e-19 Identity = 50/108 (46.30%), Postives = 66/108 (61.11%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNG 328 Y+++KLFG+TTLD +R++ F H+G+TILPL SQ P ++++K LT R Q+ GTEVVEAKAG GSATLSMAYA F + + LNG Sbjct: 138 YDKRKLFGITTLDTIRSEKFIVQAKNIEINRNDISVIGGHSGVTILPLLSQI-PHVEFTEQELKDLTHRIQNAGTEVVEAKAGAGSATLSMAYAAMRFVVSMARALNG 244 HSP 2 Score: 22.3274 bits (46), Expect = 3.809e-19 Identity = 10/25 (40.00%), Postives = 14/25 (56.00%), Query Frame = 3 Query: 345 EWSFVQSTVTELPFFASKVRLGKEG 419 E ++++ FFA VRLGK G Sbjct: 249 ECAYIEGDGKFARFFAQPVRLGKNG 273
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_PHOPR (Malate dehydrogenase OS=Photobacterium profundum GN=mdh PE=3 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 3.809e-19 Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNG 328 Y++++LFG+TTLD++R++TF H+G+TILPL SQ +DE+IKALT R Q+ GTEVVEAKAG GSATLSM A F + ++ L G Sbjct: 138 YDKRRLFGITTLDIIRSETFVAELKGKTPSDIQVPVIGGHSGVTILPLLSQVEG-VEFSDEEIKALTPRIQNAGTEVVEAKAGGGSATLSMGQAAYRFGLSLVRALQG 244 HSP 2 Score: 24.2534 bits (51), Expect = 3.809e-19 Identity = 14/35 (40.00%), Postives = 18/35 (51.43%), Query Frame = 3 Query: 315 RVLMVFQMWVEWSFVQSTVTELPFFASKVRLGKEG 419 R L Q VE ++V+ FFA V LGK+G Sbjct: 240 RALQGEQGIVECAYVEGDGKHARFFAQPVLLGKDG 274
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_SHEWM (Malate dehydrogenase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=mdh PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.955e-19 Identity = 52/112 (46.43%), Postives = 69/112 (61.61%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDV 340 Y++ +LFGVTTLDV+R++TF H+G+TILPL SQ + +DE++ ALT R Q+ GTEVVEAKAG GSATLSM A F + ++GL G +V Sbjct: 138 YDKNRLFGVTTLDVIRSETFVAEAKGLNVADVNVNVIGGHSGVTILPLLSQIEG-VSFSDEEVAALTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVRGLQGEANV 248 HSP 2 Score: 22.7126 bits (47), Expect = 4.955e-19 Identity = 11/29 (37.93%), Postives = 14/29 (48.28%), Query Frame = 3 Query: 342 VEWSFVQSTVTELPFFASKVRLGKEGGRK 428 VE ++V FFA + LGK G K Sbjct: 249 VECAYVDGGSEHAEFFAQPILLGKNGVEK 277
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_SHELP (Malate dehydrogenase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=mdh PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.444e-19 Identity = 52/112 (46.43%), Postives = 69/112 (61.61%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDV 340 Y++ +LFGVTTLDV+R++TF H+G+TILPL SQ + +DE++ ALT R Q+ GTEVVEAKAG GSATLSM A F + ++GL G +V Sbjct: 138 YDKNRLFGVTTLDVIRSETFVAEAKGLNVADVKVNVIGGHSGVTILPLLSQIEG-VSFSDEEVAALTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVRGLQGEANV 248 HSP 2 Score: 22.3274 bits (46), Expect = 6.444e-19 Identity = 11/26 (42.31%), Postives = 13/26 (50.00%), Query Frame = 3 Query: 342 VEWSFVQSTVTELPFFASKVRLGKEG 419 VE ++V FFA V LGK G Sbjct: 249 VECAYVDGGSEHADFFAQPVLLGKNG 274
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_SHESH (Malate dehydrogenase OS=Shewanella sediminis (strain HAW-EB3) GN=mdh PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.838e-19 Identity = 52/112 (46.43%), Postives = 69/112 (61.61%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDV 340 Y++ +LFGVTTLDV+R++TF H+G+TILPL SQ + +DE++ ALT R Q+ GTEVVEAKAG GSATLSM A F + ++GL G +V Sbjct: 138 YDKNRLFGVTTLDVIRSETFIAEAKGLNVDDVKINVIGGHSGVTILPLLSQVQG-VSFSDEEVAALTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVRGLQGEENV 248
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_SALMU (Malate dehydrogenase (Fragment) OS=Salmonella muenchen GN=mdh PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.838e-19 Identity = 52/112 (46.43%), Postives = 67/112 (59.82%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDV 340 Y++ KLFGVTTLD++R+ TF H+G+TILPL SQ P + +++ LTKR Q+ GTEVVEAKAG GSATLSM A A F + ++ L G DV Sbjct: 127 YDKNKLFGVTTLDIIRSNTFVAELKGKLPTEVEVPVIGGHSGVTILPLLSQI-PGVSFTEQEAAELTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEKDV 237
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_KLEP7 (Malate dehydrogenase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=mdh PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.838e-19 Identity = 51/108 (47.22%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNG 328 Y++ KLFGVTTLD++R+ TF H+G+TILPL SQ P + +D++I LTKR Q+ GTEVVEAKAG GSATLSM A A F + ++ + G Sbjct: 138 YDKNKLFGVTTLDIIRSNTFVAELKGKSATEVEVPVIGGHSGVTILPLLSQI-PGVSFSDQEIADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRAMQG 244
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_SHEB2 (Malate dehydrogenase OS=Shewanella baltica (strain OS223) GN=mdh PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.379e-19 Identity = 50/112 (44.64%), Postives = 68/112 (60.71%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDV 340 Y++ +LFG+TTLDV+R++TF H+G+TILPL SQ A DE++ +LT R Q+ GTEVVEAKAG GSATLSM A F + ++GL G ++ Sbjct: 138 YDKNRLFGITTLDVIRSETFIAELKGLNVADVKVNVIGGHSGVTILPLLSQVEG-ATFTDEEVASLTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVRGLQGEANI 248 HSP 2 Score: 22.7126 bits (47), Expect = 8.379e-19 Identity = 12/29 (41.38%), Postives = 14/29 (48.28%), Query Frame = 3 Query: 342 VEWSFVQSTVTELPFFASKVRLGKEGGRK 428 VE ++V FFA V LGK G K Sbjct: 249 VECAYVDGGSEHAEFFAQPVLLGKNGIEK 277 The following BLAST results are available for this feature:
BLAST of DY262819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262819 ID=DY262819; Name=DY262819; organism=Citrus clementina; type=EST; length=787bpback to top |