DY262819
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_ERWCT (Malate dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=mdh PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.379e-19 Identity = 52/118 (44.07%), Postives = 71/118 (60.17%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDVGGMVIC 358 Y++ KLFGVTTLD++R+ TF H+G+TILPL SQ + + +++++ LTKR Q+ GTEVVEAKAG GSATLSM A A F + ++ L G G+V C Sbjct: 138 YDKNKLFGVTTLDIIRSNTFVAELKGKQPQDINVPVIGGHSGVTILPLLSQVSG-ISFSEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQG---ENGVVEC 251 HSP 2 Score: 24.6386 bits (52), Expect = 8.379e-19 Identity = 11/26 (42.31%), Postives = 16/26 (61.54%), Query Frame = 3 Query: 342 VEWSFVQSTVTELPFFASKVRLGKEG 419 VE ++V+S FFA + LGK+G Sbjct: 249 VECAYVESDGKHARFFAQPILLGKDG 274
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_KLEVA (Malate dehydrogenase (Fragment) OS=Klebsiella variicola GN=mdh PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.024e-18 Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNG 328 Y++ KLFGVTTLD++R+ TF H+G+TILPL SQ P + +D+++ LTKR Q+ GTEVVEAKAG GSATLSM A A F + ++ + G Sbjct: 108 YDKNKLFGVTTLDIIRSNTFVAELKGKSATEVEVPVIGGHSGVTILPLLSQI-PGVSFSDQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRAMQG 214
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_KLEP3 (Malate dehydrogenase OS=Klebsiella pneumoniae (strain 342) GN=mdh PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.024e-18 Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNG 328 Y++ KLFGVTTLD++R+ TF H+G+TILPL SQ P + +D+++ LTKR Q+ GTEVVEAKAG GSATLSM A A F + ++ + G Sbjct: 138 YDKNKLFGVTTLDIIRSNTFVAELKGKSATEVEVPVIGGHSGVTILPLLSQI-PGVSFSDQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRAMQG 244
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDHM_YEAST (Malate dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=MDH1 PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 1.024e-18 Identity = 56/112 (50.00%), Postives = 65/112 (58.04%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDV 340 YN KKLFGVTTLD +RA F H+GITI+PL SQ K ++D+ L R Q GG EVV+AK G GSATLSMA+AGA FA+A L G G DV Sbjct: 156 YNPKKLFGVTTLDSIRAARFISEVENTDPTQERVNVIGGHSGITIIPLISQTNHKL-MSDDKRHELIHRIQFGGDEVVKAKNGAGSATLSMAHAGAKFANAVLSGFKGERDV 266
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_MORS5 (Malate dehydrogenase OS=Moritella sp. (strain 5710) GN=mdh PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.089e-18 Identity = 54/119 (45.38%), Postives = 70/119 (58.82%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDVGGMVICT 361 Y+++KLFG+TTLDV+R++TF H+G+TILPL SQ E++ ALT R Q+ GTEVVEAKAG GSATLSM A A F + ++ L G G+V CT Sbjct: 138 YDKRKLFGITTLDVIRSETFVSALKGISLADVEVPVIGGHSGVTILPLLSQVKG-VEFTAEEVVALTARIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEK---GIVECT 252 HSP 2 Score: 23.483 bits (49), Expect = 1.089e-18 Identity = 15/42 (35.71%), Postives = 20/42 (47.62%), Query Frame = 3 Query: 342 VEWSFVQSTVTELPFFASKVRLGKEGGRKKFWVWGPLPELPT 467 VE ++V FFA V LGK G ++ +G L E T Sbjct: 249 VECTYVDGGSEHATFFAQPVLLGK-NGVEEVLAYGELSEFET 289
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_SHEPW (Malate dehydrogenase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=mdh PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.090e-18 Identity = 52/112 (46.43%), Postives = 68/112 (60.71%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDV 340 Y++ +LFGVTTLDV+R++TF H+G+TILPL SQ + DE++ ALT R Q+ GTEVVEAKAG GSATLSM A F + ++GL G +V Sbjct: 138 YDKNRLFGVTTLDVIRSETFVAAAKGLNVADVKVNVIGGHSGVTILPLLSQIEG-VSFTDEEVAALTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVRGLQGEANV 248 HSP 2 Score: 21.9422 bits (45), Expect = 1.090e-18 Identity = 11/26 (42.31%), Postives = 13/26 (50.00%), Query Frame = 3 Query: 342 VEWSFVQSTVTELPFFASKVRLGKEG 419 VE ++V FFA V LGK G Sbjct: 249 VECAYVDGGSEHAEFFAQPVVLGKNG 274
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_PSEHT (Malate dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=mdh PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.090e-18 Identity = 51/109 (46.79%), Postives = 65/109 (59.63%), Query Frame = 2 Query: 2 TYNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNG 328 TY+ K++FG+TTLDV+R++ F H+G TILPL SQ + DE++ ALT R Q+ GTEVV AKAG GSATLSM A A F + +KGL G Sbjct: 137 TYDAKRVFGITTLDVIRSEAFVAELKGVDVATVKVPVIGGHSGTTILPLLSQVEG-VSFTDEEVAALTPRIQNAGTEVVNAKAGGGSATLSMGAAAARFCMSLVKGLQG 244 HSP 2 Score: 23.483 bits (49), Expect = 1.090e-18 Identity = 14/43 (32.56%), Postives = 23/43 (53.49%), Query Frame = 3 Query: 342 VEWSFVQSTVTELPFFASKVRLGKEGGRKKFWVWGPLPELPTK 470 V++++V + +FA VRLGK G ++ +G L TK Sbjct: 248 VDYAYVAVENGDAEYFAHPVRLGK-NGVEEILSYGELSAFETK 289
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_SHEFN (Malate dehydrogenase OS=Shewanella frigidimarina (strain NCIMB 400) GN=mdh PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.417e-18 Identity = 50/112 (44.64%), Postives = 67/112 (59.82%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDV 340 Y++ +LFG+TTLDV+R++TF H+G+TILPL SQ DE++ A+T R Q+ GTEVVEAKAG GSATLSM A F + ++GL G +V Sbjct: 138 YDKNRLFGITTLDVIRSETFIAELKGLNVADVKVNVIGGHSGVTILPLLSQVEG-VTFTDEEVAAMTTRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSLVRGLQGEANV 248 HSP 2 Score: 22.7126 bits (47), Expect = 1.417e-18 Identity = 11/29 (37.93%), Postives = 14/29 (48.28%), Query Frame = 3 Query: 342 VEWSFVQSTVTELPFFASKVRLGKEGGRK 428 VE ++V FFA + LGK G K Sbjct: 249 VECAYVDGGSEHATFFAQPILLGKNGVEK 277
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_SHISS (Malate dehydrogenase OS=Shigella sonnei (strain Ss046) GN=mdh PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.746e-18 Identity = 50/108 (46.30%), Postives = 66/108 (61.11%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNG 328 Y++ KLFGVTTLD++R+ TF H+G+TILPL SQ P + ++++ LTKR Q+ GTEVVEAKAG GSATLSM A A F + ++ L G Sbjct: 138 YDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQG 244
BLAST of DY262819 vs. ExPASy Swiss-Prot
Match: MDH_SHIFL (Malate dehydrogenase OS=Shigella flexneri GN=mdh PE=3 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 1.746e-18 Identity = 50/108 (46.30%), Postives = 66/108 (61.11%), Query Frame = 2 Query: 5 YNEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXXXHAGITILPLFSQATPKANLADEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNG 328 Y++ KLFGVTTLD++R+ TF H+G+TILPL SQ P + ++++ LTKR Q+ GTEVVEAKAG GSATLSM A A F + ++ L G Sbjct: 138 YDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPLLSQV-PGVSFTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQG 244 The following BLAST results are available for this feature:
BLAST of DY262819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262819 ID=DY262819; Name=DY262819; organism=Citrus clementina; type=EST; length=787bpback to top |