DY271432
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS16_GOSHI (40S ribosomal protein S16 OS=Gossypium hirsutum GN=RPS16 PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 6.327e-70 Identity = 131/140 (93.57%), Postives = 135/140 (96.43%), Query Frame = 3 Query: 78 VESVQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 +ESVQCF R+KTAVAVT+CKRGRGLIKINGCPIELVEPEILRFKA EPILLLGR RF GVDMRIRVKGGGHTSQIYAIRQSIA+ALVAFYQKYVDEQSKKEIKDILV YDRTLLVADPRRCEPKKFGGRGARARFQKSYR Sbjct: 6 IESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAVEPILLLGRQRFTGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVGYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 145
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS161_ARATH (40S ribosomal protein S16-1 OS=Arabidopsis thaliana GN=RPS16A PE=2 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 1.723e-67 Identity = 126/148 (85.14%), Postives = 138/148 (93.24%), Query Frame = 3 Query: 54 MATAKAGPVESVQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 MAT A ESVQCF R+KTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EPILLLG+HRFAGV+MRIRV GGGHTSQ+YAIRQSIA+ALVA+YQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGAR+R+QKSYR Sbjct: 1 MATQPA--TESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPILLLGKHRFAGVNMRIRVNGGGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARSRYQKSYR 146
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS163_ARATH (40S ribosomal protein S16-3 OS=Arabidopsis thaliana GN=RPS16C PE=2 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 2.250e-67 Identity = 125/148 (84.46%), Postives = 138/148 (93.24%), Query Frame = 3 Query: 54 MATAKAGPVESVQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 MAT A ESVQCF R+KTAVAVT+CKRG GLIK+NGCPIEL +PEILRFK +EP+LLLG+HRFAGV+MRIRV GGGHTSQ+YAIRQSIA+ALVA+YQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGAR+R+QKSYR Sbjct: 1 MATQPA--TESVQCFGRKKTAVAVTHCKRGSGLIKLNGCPIELFQPEILRFKIFEPVLLLGKHRFAGVNMRIRVNGGGHTSQVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARSRYQKSYR 146
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS16_FRIAG (40S ribosomal protein S16 OS=Fritillaria agrestis GN=RPS16 PE=2 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 8.551e-67 Identity = 122/139 (87.77%), Postives = 135/139 (97.12%), Query Frame = 3 Query: 81 ESVQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 ESVQCF R+KTAVAVT+CKRGRGLIK+NG PIELV+PEILR+KA+EPILLLGRHRF GVDMRIRV+GGG TSQIYAIRQSIA+ALVA+YQKYVDEQ+KKE+KDIL+RYDRTLLVADPRRCEPKKFGGRGAR+RFQKSYR Sbjct: 7 ESVQCFGRKKTAVAVTHCKRGRGLIKVNGSPIELVKPEILRYKAFEPILLLGRHRFVGVDMRIRVRGGGKTSQIYAIRQSIAKALVAYYQKYVDEQAKKEVKDILMRYDRTLLVADPRRCEPKKFGGRGARSRFQKSYR 145
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS16_TORRU (40S ribosomal protein S16 OS=Tortula ruralis GN=RPS16 PE=2 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 3.972e-64 Identity = 120/140 (85.71%), Postives = 135/140 (96.43%), Query Frame = 3 Query: 78 VESVQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 VESVQCF R+KTAVAVTYC+RGRGLI++ PIELVEPEILR+KA+EP+LLLGR +FAGVDMRIRVKGGG+TSQIYAIRQSIA+ALVA++QKYVDEQSKKEIKD+L+RYDRTLLVADPRRCEPKKFGGRGAR+RFQKSYR Sbjct: 4 VESVQCFGRKKTAVAVTYCRRGRGLIRLT-VPIELVEPEILRYKAFEPVLLLGRSKFAGVDMRIRVKGGGNTSQIYAIRQSIAKALVAYFQKYVDEQSKKEIKDVLLRYDRTLLVADPRRCEPKKFGGRGARSRFQKSYR 142
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS162_ARATH (40S ribosomal protein S16-2 OS=Arabidopsis thaliana GN=RPS16B PE=2 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 3.363e-63 Identity = 120/148 (81.08%), Postives = 133/148 (89.86%), Query Frame = 3 Query: 54 MATAKAGPVESVQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 MAT A ESVQCF R+KTA AVTYCKRG G+IK+NG PIEL +PEILRFK +EP+LLLG+HRFAGVDMRIR GGG+TS++YAIRQSIA+ALVA+YQKYVDEQSKKEIKDIL+RYDRTLLVADPRRCE KKFGG GARARFQKSYR Sbjct: 1 MATQPAK--ESVQCFGRKKTATAVTYCKRGSGMIKLNGSPIELYQPEILRFKIFEPVLLLGKHRFAGVDMRIRATGGGNTSRVYAIRQSIAKALVAYYQKYVDEQSKKEIKDILMRYDRTLLVADPRRCESKKFGGPGARARFQKSYR 146
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS16_ORYSJ (40S ribosomal protein S16 OS=Oryza sativa subsp. japonica GN=RPS16A PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 5.369e-61 Identity = 113/141 (80.14%), Postives = 126/141 (89.36%), Query Frame = 3 Query: 75 PVESVQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 P +VQCF R+KTAVAV+YCK GRGLIK+NG PIEL+ PE+LR KA+EPILL GR RF +DMRIRV+GGG TSQIYAIRQ+IA+ALVA+YQKYVDE SKKE+KDI RYDRTLLVADPRRCEPKKFGGRGARARFQKSYR Sbjct: 9 PPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRFKDIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 149
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS16_ORYSI (40S ribosomal protein S16 OS=Oryza sativa subsp. indica GN=RPS16A PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 5.369e-61 Identity = 113/141 (80.14%), Postives = 126/141 (89.36%), Query Frame = 3 Query: 75 PVESVQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 P +VQCF R+KTAVAV+YCK GRGLIK+NG PIEL+ PE+LR KA+EPILL GR RF +DMRIRV+GGG TSQIYAIRQ+IA+ALVA+YQKYVDE SKKE+KDI RYDRTLLVADPRRCEPKKFGGRGARARFQKSYR Sbjct: 9 PPGTVQCFGRKKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRFKDIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDEASKKEVKDIFARYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 149
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS16_RAT (40S ribosomal protein S16 OS=Rattus norvegicus GN=Rps16 PE=1 SV=2) HSP 1 Score: 226.483 bits (576), Expect = 1.119e-58 Identity = 106/142 (74.65%), Postives = 127/142 (89.44%), Query Frame = 3 Query: 72 GPVESVQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 GP++SVQ F R+KTA AV +CKRG GLIK+NG P+E++EP L++K EP+LLLG+ RFAGVD+R+RVKGGGH +QIYAIRQSI++ALVA+YQKYVDE SKKEIKDIL++YDRTLLVADPRRCE KKFGG GARAR+QKSYR Sbjct: 5 GPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
BLAST of DY271432 vs. ExPASy Swiss-Prot
Match: RS16_PIG (40S ribosomal protein S16 OS=Sus scrofa GN=RPS16 PE=2 SV=4) HSP 1 Score: 226.483 bits (576), Expect = 1.119e-58 Identity = 106/142 (74.65%), Postives = 127/142 (89.44%), Query Frame = 3 Query: 72 GPVESVQCFRRQKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAQALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 497 GP++SVQ F R+KTA AV +CKRG GLIK+NG P+E++EP L++K EP+LLLG+ RFAGVD+R+RVKGGGH +QIYAIRQSI++ALVA+YQKYVDE SKKEIKDIL++YDRTLLVADPRRCE KKFGG GARAR+QKSYR Sbjct: 5 GPLQSVQVFGRKKTATAVAHCKRGNGLIKVNGRPLEMIEPRTLQYKLLEPVLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQYDRTLLVADPRRCESKKFGGPGARARYQKSYR 146 The following BLAST results are available for this feature:
BLAST of DY271432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >DY271432 ID=DY271432; Name=DY271432; organism=Citrus clementina; type=EST; length=716bpback to top |