DY271435

Overview
NameDY271435
Unique NameDY271435
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length981
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY271435_ssr549 microsatellite DY271435_ssr549:549..560. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig14845 contig Ccv1_Contig14845:84..1058. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY271435 vs. ExPASy Swiss-Prot
Match: ROC1_ARATH (Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 4.150e-58
Identity = 128/218 (58.72%), Postives = 147/218 (67.43%), Query Frame = 3
Query:  216 SSPSRFVRNVAVSSEFDQEEDLLSD---EDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVN----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSPGFRVCDLPFLLKRLTMPLNSLNGVDL 830
            S  SRF RNVA++SEF+ EED  +D       +FS DLKLFVGNLPF+VDSAQLA LFE+AGNVEMVEVIYDK+TGRSRGFGFVTMSSV EVEAAAQQFNGYEL+GRPLRVN                                      NRVYVGNLSWGVDD+ALE+LF EQGKV+EA+V+YDR+SGRS GF         + +   + SL+G DL
Sbjct:   54 SPASRFARNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYD-SSQEVQNAIKSLDGADL 270          

HSP 2 Score: 72.4034 bits (176), Expect = 4.496e-12
Identity = 36/82 (43.90%), Postives = 51/82 (62.20%), Query Frame = 3
Query:  297 GSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVN 542
            GS      +++VGNL + VD   L  LF   G V    VIYD+ +GRS+GFGFVT  S +EV+ A +  +G +L+GR +RV+
Sbjct:  197 GSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVS 278          
BLAST of DY271435 vs. ExPASy Swiss-Prot
Match: ROC1_NICSY (29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.130e-55
Identity = 126/206 (61.17%), Postives = 141/206 (68.45%), Query Frame = 3
Query:  225 SRFVRNVAVSSEFDQEEDLLSDEDG----SNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSPGFRVCDLPFLLKRLTMPLNSLNGVDL 830
            SRFVR V +S +FDQ ED+   +DG     NFSPDLK+FVGNLPFS DSA LA LFE AGNVEMVEVIYDK+TGRSRGFGFVTMSS EEVEAA QQFNGYEL+GR LRVN                            NRVYVGNL+WGVD  ALETLF EQGKV++AKVVYDR+SGRS GF         + +   + SL+GVDL
Sbjct:   53 SRFVRKVTLS-DFDQIEDVEDGDDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVN--SGPPPEKRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYS-SAEEVNNAIESLDGVDL 254          

HSP 2 Score: 77.0258 bits (188), Expect = 1.826e-13
Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = 3
Query:  297 GSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVN 542
            G +F    +++VGNL + VD   L  LF   G V   +V+YD+ +GRSRGFGFVT SS EEV  A +  +G +L GR +RV+
Sbjct:  181 GGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVS 262          
BLAST of DY271435 vs. ExPASy Swiss-Prot
Match: ROC1_NICPL (30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 4.020e-53
Identity = 126/216 (58.33%), Postives = 142/216 (65.74%), Query Frame = 3
Query:  213 PSS--PSRFVRNVAVSSEFDQEEDLLSDEDG----SNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVN----XXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSPGFRVCDLPFLLKRLTMPLNSLNGVDL 830
            PSS   SRFVR V +  +FDQ ED+   ++G     NFSPDLK+FVGNL FS DSA LA LFE AGNVEMVEVIYDK+TGRSRGFGFVTMSS EEVEAA QQFNGYEL+GR LRVN                                NRVYVGNL+WGVD  ALETLF EQGKV++AKVVYDR+SGRS GF         + +   + SL+GVDL
Sbjct:   47 PSSCFSSRFVRKVTLP-DFDQIEDVEDGDEGVEEERNFSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYS-SAEEVNNAIESLDGVDL 260          

HSP 2 Score: 77.0258 bits (188), Expect = 1.826e-13
Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = 3
Query:  297 GSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVN 542
            G +F    +++VGNL + VD   L  LF   G V   +V+YD+ +GRSRGFGFVT SS EEV  A +  +G +L GR +RV+
Sbjct:  187 GGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVS 268          
BLAST of DY271435 vs. ExPASy Swiss-Prot
Match: ROC2_NICSY (29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 9.902e-52
Identity = 122/219 (55.71%), Postives = 137/219 (62.56%), Query Frame = 3
Query:  225 SRFVRNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVN-----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSPGFRVCDLPFLLKRLTMPLNSLNGVDL 830
            S F   VA+S  FDQ ED +   +   FS DLKLFVGNLPFSVDSA LAGLFE AGNVEMVEVIYDK+TGRSRGFGFVTMS+ EEVEAA QQFNGYE++GR +RVN                                             NRVYVGNLSWGVDDLAL+ LF EQG V++AKVVYDR+SGRS GF         K +   ++SLNGVDL
Sbjct:   57 SSFSTRVALSG-FDQLEDDVEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYS-SSKEVNDAIDSLNGVDL 273          

HSP 2 Score: 76.2554 bits (186), Expect = 3.114e-13
Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = 3
Query:  297 GSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVN 542
            G +     +++VGNL + VD   L  LF   GNV   +V+YD+ +GRSRGFGFVT SS +EV  A    NG +L+GR +RV+
Sbjct:  200 GRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVS 281          
BLAST of DY271435 vs. ExPASy Swiss-Prot
Match: ROC2_NICPL (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.914e-51
Identity = 119/219 (54.34%), Postives = 138/219 (63.01%), Query Frame = 3
Query:  225 SRFVRNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVN-----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSPGFRVCDLPFLLKRLTMPLNSLNGVDL 830
            S F   VA+S +FDQ ED +   +   FS DLKLFVGNLPFSVDSA LAGLFE AGNVE+VEVIYDK++GRSRGFGFVTMS+ EEVEAA QQFNGYE++GR +RVN                                             NRVYVGNLSWGVDDLAL+ LF EQG V++AKVVYDR+SGRS GF         K +   ++SLNG+DL
Sbjct:   58 SSFSTRVALS-DFDQLEDDVEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYS-SAKEVNDAIDSLNGIDL 274          

HSP 2 Score: 77.0258 bits (188), Expect = 1.826e-13
Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = 3
Query:  297 GSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVN 542
            G +     +++VGNL + VD   L  LF   GNV   +V+YD+ +GRSRGFGFVT SS +EV  A    NG +L+GR +RV+
Sbjct:  201 GRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVS 282          
BLAST of DY271435 vs. ExPASy Swiss-Prot
Match: ROC2_ARATH (29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=RBP29 PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 3.530e-41
Identity = 89/114 (78.07%), Postives = 99/114 (86.84%), Query Frame = 3
Query:  222 PSRFVRNVAVSSEFD-QEEDLLSDEDGS------NFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVN 542
            PSRFVRNVAVSS+F+ +E+D+ +D D S      +FSPDLKLFVGNL F+VDSAQLA LFE+AGNVEMVEVIYDKVTGRSRGFGFVTMS+  EVEAAAQQFNGYE EGRPLRVN
Sbjct:   60 PSRFVRNVAVSSDFEVEEDDMFADGDDSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVN 173          

HSP 2 Score: 87.0409 bits (214), Expect = 1.764e-16
Identity = 43/68 (63.24%), Postives = 52/68 (76.47%), Query Frame = 3
Query:  627 NRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSPGFRVCDLPFLLKRLTMPLNSLNGVDL 830
            NR+YVGNLSWGVDD+ALE LF EQGKV+EA+V+YDR+SGRS GF    L    + +   +NSLNG DL
Sbjct:  257 NRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLS-SSQEVQKAINSLNGADL 323          

HSP 3 Score: 78.1814 bits (191), Expect = 8.194e-14
Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 3
Query:  297 GSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVN 542
            GS      +L+VGNL + VD   L  LF   G V    VIYD+ +GRS+GFGFVT+SS +EV+ A    NG +L+GR +RV+
Sbjct:  250 GSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVS 331          
BLAST of DY271435 vs. ExPASy Swiss-Prot
Match: ROC4_NICSY (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.780e-35
Identity = 84/176 (47.73%), Postives = 104/176 (59.09%), Query Frame = 3
Query:  231 FVRNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSPGF 758
            FV  V  + E D+ E    +E+      D KLFVGNLP+ VDS  LA LFE AG VE+ EVIY++ T +SRGFGFVTMS+VEE E A + +N Y++ GR L VN                             R+YVGN+ WG+DD  LE LF E GKV+ A+VVYDRE+GRS GF
Sbjct:  107 FVEAVGDAGESDEVEADEEEEEFQEPPEDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNGRLLTVNKAARRGERPERPPRTFEQSY---------RIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGF 273          

HSP 2 Score: 80.1073 bits (196), Expect = 2.156e-14
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 3
Query:  306 FSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVN 542
            F    +++VGN+P+ +D A+L  LF   G V    V+YD+ TGRSRGFGFVTM+S  E+  A    +G  L+GR +RVN
Sbjct:  226 FEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVN 304          
BLAST of DY271435 vs. ExPASy Swiss-Prot
Match: ROC1_SPIOL (28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.588e-33
Identity = 81/159 (50.94%), Postives = 97/159 (61.01%), Query Frame = 3
Query:  291 EDGSNFSP---DLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSPGF 758
            E G  FS    + KLFVGNLP+ VDS +LAG+F+ AG VE+ EVIY++ T RSRGFGFVTMS+VEE E A +  NGY+++GR L VN                             RVYVGNL W VD   LE LF E GKV+ A+VV DRE+GRS GF
Sbjct:   43 EGGQGFSEPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGSPERAPRGDFEPSC---------RVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGF 192          

HSP 2 Score: 81.6481 bits (200), Expect = 7.412e-15
Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 3
Query:  303 NFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVN 542
            +F P  +++VGNLP+ VD+++L  LF   G V    V+ D+ TGRSRGFGFVTMSS  EV  A    +G  L+GR +RVN
Sbjct:  144 DFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVN 223          
BLAST of DY271435 vs. ExPASy Swiss-Prot
Match: ROC3_ARATH (31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=RBP31 PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.029e-32
Identity = 84/169 (49.70%), Postives = 102/169 (60.36%), Query Frame = 3
Query:  255 SEFDQEEDLLSDE-DGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSPGF 758
            SE D  E  +S+  +    S + KLFVGNL + V+S  LA LFE AG VE+ EVIY++ T +SRGFGFVTMSSV+E E A ++FN Y+L GR L VN                             RVYVGNL W VD+  LE LF E GKV+EA+VVYDRE+GRS GF
Sbjct:  128 SEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAF---------RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGF 287          

HSP 2 Score: 85.5001 bits (210), Expect = 5.133e-16
Identity = 40/79 (50.63%), Postives = 53/79 (67.09%), Query Frame = 3
Query:  306 FSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVN 542
            + P  +++VGNLP+ VD+ +L  LF   G V    V+YD+ TGRSRGFGFVTMS V+E+  A    +G  LEGR +RVN
Sbjct:  240 YEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVN 318          
BLAST of DY271435 vs. ExPASy Swiss-Prot
Match: ROC3_NICSY (28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.293e-32
Identity = 84/194 (43.30%), Postives = 107/194 (55.15%), Query Frame = 3
Query:  225 SRFVRNVAVSSEFDQEEDLLSDEDGSNF----------------SPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSPGF 758
            ++F   V+V SE D    L   E G +F                S D KLFVGNLP+ +DS  LA LF+ AG VE+ EVIY++ T RSRGFGFVTMS+VEE + A + ++ Y+L GR L VN                             R+YVGN+ W +DD  LE +F E GKV+ A+VV+DRESGRS GF
Sbjct:   50 TQFPTFVSVLSEDDNTLVLDDQEQGGDFPSFVGEAGETEEYQEPSEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYDLNGRLLTVNKAAPRGSRPERAPRTFQPTY---------RIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGF 234          

HSP 2 Score: 79.7221 bits (195), Expect = 2.816e-14
Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 3
Query:  306 FSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVN 542
            F P  +++VGN+P+ +D A+L  +F   G V    V++D+ +GRSRGFGFVTMSS  E+  A    +G  L+GR +RVN
Sbjct:  187 FQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVN 265          
The following BLAST results are available for this feature:
BLAST of DY271435 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
ROC1_ARATH4.150e-5858.72Ribonucleoprotein At2g37220, chloroplastic OS=Arab... [more]
ROC1_NICSY1.130e-5561.1729 kDa ribonucleoprotein A, chloroplastic OS=Nicot... [more]
ROC1_NICPL4.020e-5358.3330 kDa ribonucleoprotein, chloroplastic OS=Nicotia... [more]
ROC2_NICSY9.902e-5255.7129 kDa ribonucleoprotein B, chloroplastic OS=Nicot... [more]
ROC2_NICPL4.914e-5154.3431 kDa ribonucleoprotein, chloroplastic OS=Nicotia... [more]
ROC2_ARATH3.530e-4178.0729 kDa ribonucleoprotein, chloroplastic OS=Arabido... [more]
ROC4_NICSY3.780e-3547.7331 kDa ribonucleoprotein, chloroplastic OS=Nicotia... [more]
ROC1_SPIOL1.588e-3350.9428 kDa ribonucleoprotein, chloroplastic OS=Spinaci... [more]
ROC3_ARATH1.029e-3249.7031 kDa ribonucleoprotein, chloroplastic OS=Arabido... [more]
ROC3_NICSY2.293e-3243.3028 kDa ribonucleoprotein, chloroplastic OS=Nicotia... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YP17FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271435 ID=DY271435; Name=DY271435; organism=Citrus clementina; type=EST; length=981bp
GCTTTCAAAGAAACTCAAAAACCCTTGAGCCAGTAGCCATGTCTACCACG
TCAGCTTCTTCGCTGGTGCTCCCATCTCTCAGTCCCAAAACCCTAGCCTT
CTACAACTCAAAACCCACTTCATTTTCTCTCTTATCTTCCTCCTCTTCTC
ACAAACTTCTAGCGAAGCCCATCTCGATATCCTCTTCTTTCATCCATTCT
TTTCAACCCTTGCCCTCTTCCCCCTCTCGTTTCGTCAGAAACGTAGCCGT
TTCGTCCGAGTTTGACCAGGAAGAGGACCTTTTGAGCGATGAAGACGGTT
CGAATTTCTCCCCCGACTTGAAACTTTTTGTGGGTAACCTTCCTTTTAGC
GTTGACAGTGCTCAGCTTGCTGGCTTGTTTGAAACCGCTGGAAATGTTGA
GATGGTTGAGGTAATATATGACAAGGTCACTGGGAGAAGCAGAGGATTTG
GTTTTGTGACCATGTCAAGTGTTGAGGAAGTTGAAGCAGCTGCTCAGCAG
TTCAATGGCTATGAACTCGAGGGCCGACCCCTGAGGGTGAACTCTGGACC
TCCTCCTCCTAGGAGGGAAGAATTCTCTCCCAGAGGGCCCAGAGGAGGTG
GTGCTGGTGCGCCTTCTAGTGGTGGCAACCGTGTTTATGTTGGTAACCTT
TCATGGGGTGTTGATGATTTAGCTCTTGAGACTTTGTTTCGTGAGCAAGG
GAAGGTTTTGGAAGCCAAAGTGGTATATGACAGGGAGAGTGGTAGATCGC
CNGGGTTTCGGGTTTGTGACTTACCGTTCCTGCTGAAGAGGTTGACAATG
CCATTGAATTCCCTGAATGGTGTAGATTTGGCCCGGTAGAGCAATTCAAG
TCCCCGTGGCCTGAGCAAGGCCACAAAGGCCGTCCATTTTGACCTGTGGC
CGAAACTAGTTTTCCCGTGGTTTTGAATTTAACCTAAGTTATTTGGGGTT
GGTAAAAGGCTGCCTTACCCTGGCCACCCAA
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