DY305089
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305089 vs. ExPASy Swiss-Prot
Match: TNPO1_MOUSE (Transportin-1 OS=Mus musculus GN=Tnpo1 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 2.933e-24 Identity = 47/106 (44.34%), Postives = 74/106 (69.81%), Query Frame = 1 Query: 13 KSLIENSAITLGRLAWVCPELVSPHMEHFMQPWCIALSMIRDDTEKEDAFRGLCAMVKANPSGALSSLVFMCRAIASWHEIRSEELHNEVCQVLHGX*QMLRNGAW 330 K+L+EN+AIT+GRL +VCP+ V+P ++ F++PWC +L IRD+ EK+ AFRG+C M+ NPSG + +F C A+ASW + ++L + C++LHG + + W Sbjct: 773 KTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDFIFFCDAVASWINPK-DDLRDMFCKILHGFKNQVGDENW 877
BLAST of DY305089 vs. ExPASy Swiss-Prot
Match: TNPO1_HUMAN (Transportin-1 OS=Homo sapiens GN=TNPO1 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 2.933e-24 Identity = 47/106 (44.34%), Postives = 74/106 (69.81%), Query Frame = 1 Query: 13 KSLIENSAITLGRLAWVCPELVSPHMEHFMQPWCIALSMIRDDTEKEDAFRGLCAMVKANPSGALSSLVFMCRAIASWHEIRSEELHNEVCQVLHGX*QMLRNGAW 330 K+L+EN+AIT+GRL +VCP+ V+P ++ F++PWC +L IRD+ EK+ AFRG+C M+ NPSG + +F C A+ASW + ++L + C++LHG + + W Sbjct: 773 KTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDFIFFCDAVASWINPK-DDLRDMFCKILHGFKNQVGDENW 877
BLAST of DY305089 vs. ExPASy Swiss-Prot
Match: TNPO1_BOVIN (Transportin-1 OS=Bos taurus GN=TNPO1 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 2.933e-24 Identity = 47/106 (44.34%), Postives = 74/106 (69.81%), Query Frame = 1 Query: 13 KSLIENSAITLGRLAWVCPELVSPHMEHFMQPWCIALSMIRDDTEKEDAFRGLCAMVKANPSGALSSLVFMCRAIASWHEIRSEELHNEVCQVLHGX*QMLRNGAW 330 K+L+EN+AIT+GRL +VCP+ V+P ++ F++PWC +L IRD+ EK+ AFRG+C M+ NPSG + +F C A+ASW + ++L + C++LHG + + W Sbjct: 773 KTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDFIFFCDAVASWINPK-DDLRDMFCKILHGFKNQVGDENW 877
BLAST of DY305089 vs. ExPASy Swiss-Prot
Match: TNPO2_MOUSE (Transportin-2 OS=Mus musculus GN=Tnpo2 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 9.436e-23 Identity = 47/115 (40.87%), Postives = 73/115 (63.48%), Query Frame = 1 Query: 13 KSLIENSAITLGRLAWVCPELVSPHMEHFMQPWCIALSMIRDDTEKEDAFRGLCAMVKANPSGALSSLVFMCRAIASWHEIRSEELHNEVCQVLHGX*QMLRNGAWDQCMSALEP 357 K+L+EN+AIT+GRL +VCP+ V+P ++ F++PWC +L IRD+ EK+ AFRG+C M+ NP G + +F C A+ASW + ++L + ++LHG + W Q P Sbjct: 762 KTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICMMIGVNPGGVVQDFIFFCDAVASWVSPK-DDLRDMFYKILHGFKDQVGEENWQQFSEQFPP 875
BLAST of DY305089 vs. ExPASy Swiss-Prot
Match: TNPO2_HUMAN (Transportin-2 OS=Homo sapiens GN=TNPO2 PE=1 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 1.968e-20 Identity = 47/125 (37.60%), Postives = 73/125 (58.40%), Query Frame = 1 Query: 13 KSLIENS----------AITLGRLAWVCPELVSPHMEHFMQPWCIALSMIRDDTEKEDAFRGLCAMVKANPSGALSSLVFMCRAIASWHEIRSEELHNEVCQVLHGX*QMLRNGAWDQCMSALEP 357 K+L+EN+ AIT+GRL +VCP+ V+P ++ F++PWC +L IRD+ EK+ AFRG+C M+ NP G + +F C A+ASW + ++L + ++LHG + W Q P Sbjct: 762 KTLLENTGRLTSPSAIPAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICMMIGVNPGGVVQDFIFFCDAVASWVSPK-DDLRDMFYKILHGFKDQVGEDNWQQFSEQFPP 885
BLAST of DY305089 vs. ExPASy Swiss-Prot
Match: TNPO_DICDI (Transportin OS=Dictyostelium discoideum GN=tnpo PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 6.998e-18 Identity = 44/110 (40.00%), Postives = 72/110 (65.45%), Query Frame = 1 Query: 7 LNKSLIENSAITLGRLAWVCPELVSPHMEHFMQPWCIALSMIRDDTEKEDAFRGLCAMVKANPSGALSSLVFMCRAIASWHEIRSEELHNEVCQVLHGX*QMLRNGAWDQ 336 LN+ ++EN+A+T+GRL V P +SP ++ F+Q WC+A+ DD EK+ AFRG+ ++ NP+GAL LV++C A+ASW +++ +L+ ++LH + G W Q Sbjct: 799 LNRGVLENTAVTIGRLGIVSPADISPFVDKFIQCWCMAIRRKTDDIEKDSAFRGMWLIINNNPNGALRHLVYICDAVASWDKMQ-PDLYEAYFKLLHMY-KTSMGGVWAQ 906
BLAST of DY305089 vs. ExPASy Swiss-Prot
Match: IMB2_SCHPO (Importin subunit beta-2 OS=Schizosaccharomyces pombe GN=kap104 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.972e-12 Identity = 41/106 (38.68%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 10 NKSLIENSAITLGRLAWVCPELVSPHMEHFMQPWCIALSMIRDDTEKEDAFRGLCAMVKANPSGALSSLVFMCRAIASWHEIRSEELHNEVCQVLHGX*QMLRNGA 327 N +++EN AIT+GRL PELV+PH+E F QPW + + ++ EK+ AFRG C ++ NP ALS L+ M + +E S EL + ++L G ++ A Sbjct: 788 NTTVLENVAITIGRLGVYNPELVAPHLELFYQPWFEIIKTVGENEEKDSAFRGFCNILACNPQ-ALSYLLPMFVLCVAEYENPSAELRDMFQKILQGSVELFNGKA 892 The following BLAST results are available for this feature:
BLAST of DY305089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305089 ID=DY305089; Name=DY305089; organism=Citrus clementina; type=EST; length=1166bpback to top |