DY305166
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305166 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 4.266e-55 Identity = 99/209 (47.37%), Postives = 137/209 (65.55%), Query Frame = -3 Query: 176 GMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLSI 802 GM SAV+T+CGQAYGA +Y +GI QR+ VL + +T LY +S PIL +G+S IA +F G+IPQI+A+AL P+Q+FLQAQ+IV P AY+S ++H LL+W+ SWW++V +YI+ S CK TW GF+ +AF G+ +FKL+ ASAVMLCLE WY Q LV+++GLL NP ++LD++SI Sbjct: 108 GMASAVQTVCGQAYGARQYSSMGIICQRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHEGQIFARGMIPQIYAFALACPMQRFLQAQNIVNPLAYMSLGVFLLHTLLTWLVTNVLDFGLLGAALILSFSWWLLVAVNGMYILMSPNCKETWTGFSTRAFRGIWPYFKLTVASAVMLCLEIWYNQGLVIISGLLSNPTISLDAISI 316 HSP 2 Score: 36.5798 bits (83), Expect = 4.266e-55 Identity = 17/41 (41.46%), Postives = 28/41 (68.29%), Query Frame = -1 Query: 874 INYLMFMSTPNLFRANLGNLEVAAASLGNTGIQVFAYGLMV 996 +NY++ T +F +LG+L++A AS+ GIQ AYG+M+ Sbjct: 68 LNYMLSFVTV-MFTGHLGSLQLAGASIATVGIQGLAYGIML 107
BLAST of DY305166 vs. ExPASy Swiss-Prot
Match: S47A1_RABIT (Multidrug and toxin extrusion protein 1 OS=Oryctolagus cuniculus GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 4.562e-20 Identity = 58/209 (27.75%), Postives = 108/209 (51.67%), Query Frame = -3 Query: 179 WGMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLS 805 +G+ SA +TL Q YG+ + +G+ LQR +++L L + L++ ++ IL+ + P ++ +V IP + A L K+L Q IV P A +V+ L +++ VY+ + + + + F+YI++S + TW G++++ SFF+L+ S +MLC+E W ++I L+G+L EL S++ Sbjct: 89 FGLSSACDTLISQTYGSRNLKHVGVILQRGSLILLLCCLPCWALFLNTQHILLLFRQDPAVSRLTQTYVTIFIPALPATFLYTLQVKYLLNQGIVLPQVVTGVAANLVNALANYLFVYQLHLGVMGSALANTVAQFTLALLLFLYILRSKVYQATWGGWSLECLQDWASFFRLAIPSMLMLCMEWWAYEIGSFLSGILGMVELGAQSVT 297
BLAST of DY305166 vs. ExPASy Swiss-Prot
Match: YAO6_SCHPO (Uncharacterized transporter C11D3.06 OS=Schizosaccharomyces pombe GN=SPAC11D3.06 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 2.264e-19 Identity = 62/209 (29.67%), Postives = 107/209 (51.20%), Query Frame = -3 Query: 182 GMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWI--VVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 802 G +A +TL +GA K + LGI LQ ++L++ + + +++ +S+PILIFL ++P++A ++ F+ LIP Y ++KFLQ Q I +YI T +++ L+++ V+ S+W+ +++ Q+ VK W G+ + F KLS VM+ E W F+I+ L+AG L LA S+ Sbjct: 64 GGTTAFDTLGSNLWGAGKKQELGILLQTGFIVLSILYLPICLVWWYSKPILIFLHQTPELAEASQKFLRYLIPGGLGYVCFELLKKFLQTQEITRAGSYILLVTSPLNVALNFLLVHYYGLGLKGAPLATGLSYWLSFILLTQYAKYVKG---AEAWNGWNKRCLENFGPFVKLSLLGIVMVGTEWWAFEIVALVAGKLGAVPLAAQSV 269
BLAST of DY305166 vs. ExPASy Swiss-Prot
Match: S47A1_XENTR (Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis GN=slc47a1 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.957e-19 Identity = 57/207 (27.54%), Postives = 102/207 (49.28%), Query Frame = -3 Query: 182 GMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 802 G+ A +TL Q +G + +++GI LQR ++L L L + + IL+ + P+++ ++V +P + A L + K+LQ Q I+ P + + L +++ +Y S +I +I F+YIV TW G++ F +F +L+ AS +MLC+E W F+I + LAG+L +LA ++ Sbjct: 105 GLAGACDTLISQTFGGSNLKLVGIILQRGILILLLFCFPCWALLINTESILLLFRQDPEVSKLTQIYVLIFLPALPAAFLYQLLAKYLQNQGIIYPQVLTGFIANIFNALFNYILLYVLGLGVMGSACANTVSQFIQMILLFLYIVWRRLYADTWGGWSQACFEEWGAFIRLAVASMLMLCIEWWAFEISMFLAGVLGMVDLAAQAI 311
BLAST of DY305166 vs. ExPASy Swiss-Prot
Match: S47A1_HUMAN (Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.044e-19 Identity = 57/208 (27.40%), Postives = 105/208 (50.48%), Query Frame = -3 Query: 182 WGMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 805 +G+ SA +TL Q YG+ + +G+ LQRSA++L L L++ ++ IL+ + PD++ +V IP + A L K+L Q IV P A +V+ L +++ +++ S + + + F+YI+ + TW G++++ SF +L+ S +MLC+E W +++ L+G+L EL S+ Sbjct: 90 FGLSSACDTLISQTYGSQNLKHVGVILQRSALVLLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGVIGSALANLISQYTLALLLFLYILGKKLHQATWGGWSLECLQDWASFLRLAIPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSI 297
BLAST of DY305166 vs. ExPASy Swiss-Prot
Match: S47A1_PONAB (Multidrug and toxin extrusion protein 1 OS=Pongo abelii GN=SLC47A1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.124e-18 Identity = 57/208 (27.40%), Postives = 103/208 (49.52%), Query Frame = -3 Query: 182 WGMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 805 +G+ SA +TL Q YG+ + +G+ LQRSA++L L L++ ++ IL+ + PD++ +V IP + A L K+L Q IV P A +V+ L +++ +++ S + + + F YI+ + TW G++++ SF L+ S +MLC+E W +++ L+G+L EL S+ Sbjct: 90 FGLSSACDTLISQTYGSQNLKHVGVILQRSALILLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLLNQGIVLPQIVTGVAANLVNALANYLFLHQLHLGAIGSALANLISQYTLALLLFFYILGKKLHQATWGGWSLECLQDWASFLHLAVPSMLMLCMEWWAYEVGSFLSGILGMVELGAQSI 297
BLAST of DY305166 vs. ExPASy Swiss-Prot
Match: S47A1_DANRE (Multidrug and toxin extrusion protein 1 OS=Danio rerio GN=slc47a1 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.124e-18 Identity = 59/208 (28.37%), Postives = 109/208 (52.40%), Query Frame = -3 Query: 182 GMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQ-KFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 802 G+ SA +TL Q +G+N + +G+ LQR ++L L L + + PIL+ + +SP++AS + ++V +P + A A + +Q ++LQ Q I+ P A +++ L+++V ++ S + + + +VYI + K TW G++ +F +L+ S +MLC+E W ++I LAGL+ EL S+ Sbjct: 109 GLASACDTLISQTFGSNNLKRVGVILQRGILILLLACFPCWALLINTEPILLAVRQSPNVASLSQLYVKIFMPALPA-AFMYQLQGRYLQNQGIIWPQVITGAAGNILNALINYVFLHLLELGVAGSAAANTISQYSLAVFLYVYIRWKNLHKATWDGWSRDCLQEWGAFIRLALPSMLMLCVEWWTYEIGGFLAGLISETELGAQSV 315
BLAST of DY305166 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.917e-18 Identity = 60/208 (28.85%), Postives = 105/208 (50.48%), Query Frame = -3 Query: 182 GMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQ-KFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSL 802 G+ SA +TL Q++G + +G+ LQR ++L L +++ + +L+ L + PD+A A V+V IP + A A F +Q ++LQ+Q I+ P + A VV++ ++ +Y S + + F+Y+ HTW G+T + F S+ +L+ S M+C+E W F+I LAGL+ EL ++ Sbjct: 100 GLASACDTLMSQSFGGKNLKRVGVILQRGILILLLCCFPCWAIFLNTERLLLLLRQDPDVARLAQVYVMICIPALPA-AFLFQLQTRYLQSQGIIMPQVIVGIAANVVNVGMNAFLLYALDLGVVGSAWANTTSQFFLSALLFLYVWWKRIHIHTWGGWTRECFQEWSSYTRLAIPSMFMVCIEWWTFEIGTFLAGLVNVTELGAQAV 306
BLAST of DY305166 vs. ExPASy Swiss-Prot
Match: S47A1_MOUSE (Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1 PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 4.270e-18 Identity = 58/208 (27.88%), Postives = 100/208 (48.08%), Query Frame = -3 Query: 179 GMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLS 802 G+ SA +TL Q YG+ + +G+ LQR ++L L L++ + IL+ + PD++ +V IP + A L K+L Q IV P A +V+ L ++V +Y S + + I F+YI+ + TW G++ + SF +L+ S +MLC+E W +++ L+G+L EL S++ Sbjct: 91 GLSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMIFIPALPAAFLYTLQVKYLLNQGIVLPQIMTGIAANLVNALANYVFLYHLHLGVMGSALANTISQFALAIFLFLYILWRRLHQATWGGWSWECLQDWASFLRLAIPSMLMLCIEWWAYEVGSFLSGILGMVELGAQSIT 298
BLAST of DY305166 vs. ExPASy Swiss-Prot
Match: S47A1_RAT (Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.119e-17 Identity = 56/208 (26.92%), Postives = 100/208 (48.08%), Query Frame = -3 Query: 179 GMGSAVETLCGQAYGANKYEMLGIYLQRSAVLLTLTGILMTVLYVFSRPILIFLGESPDIASSAAVFVYGLIPQIFAYALNFPIQKFLQAQSIVAPSAYISTATLVVHLLLSWVAVYEXXXXXXXXXXXXXXSWWIVVIAQFVYIVKSDRCKHTWRGFTVQAFSGLPSFFKLSAASAVMLCLETWYFQILVLLAGLLPNPELALDSLS 802 G+ SA +TL Q YG+ + +G+ LQR ++L L L++ + IL+ + PD++ +V IP + A L K+L Q IV P A +V+ L +++ +++ S + + I F+YI+ TW G++ + SF +L+ S +MLC+E W +++ L+G+L EL S++ Sbjct: 90 GLSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMVFIPALPAAFLYTLQVKYLLNQGIVLPQVITGIAANLVNALANYLFLHQLHLGVMGSALANTISQFALAIFLFLYILWRKLHHATWGGWSWECLQDWASFLQLAIPSMLMLCIEWWAYEVGSFLSGILGMVELGAQSIT 297 The following BLAST results are available for this feature:
BLAST of DY305166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305166 ID=DY305166; Name=DY305166; organism=Citrus clementina; type=EST; length=1200bpback to top |