DY305169
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305169 vs. ExPASy Swiss-Prot
Match: BRE_DANRE (BRCA1-A complex subunit BRE OS=Danio rerio GN=bre PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.649e-12 Identity = 46/145 (31.72%), Postives = 76/145 (52.41%), Query Frame = 3 Query: 105 KLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEETLERQVSEAVSLIEVRRRFIEALAPLFGRPI-ETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAER 533 KL +P+++ +L + +P + G C+ +Y+P + + L +V + RR +I A FG + E D+V + K + F FLV L FP+ QP+L QS +F S G + S + YP+SPRW+ ++MA+R Sbjct: 221 KLYLSPSIEHALGGSSALHIPAFPSGGCLIDYVPQVCQLLTNKVQYVIQGYHKRREYIAAFLSHFGMGVVEYDAVGFTKLTLLLMWKDFCFLVHVDLPLYFPRDQPTLTFQSIYHFTSSGQ-LYSQVQKSYPYSPRWDGNEMAKR 364
BLAST of DY305169 vs. ExPASy Swiss-Prot
Match: BRE_XENTR (BRCA1-A complex subunit BRE OS=Xenopus tropicalis GN=bre PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 8.183e-12 Identity = 44/145 (30.34%), Postives = 75/145 (51.72%), Query Frame = 3 Query: 105 KLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEETLERQVSEAVSLIEVRRRFIEALAPLFGRPI-ETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAER 533 KL +P ++ +L + +P + G C+ +Y+P + + L +V + RR +I A FG + E D+ + K ++ F FLV L FP+ QP+L QS +F + G + S +YP+SPRW+ ++MA+R Sbjct: 218 KLFLSPRIEHALGGSSALHIPAFPSGSCLIDYVPQVCQLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLLLSWKDFCFLVHIDLPLYFPRDQPTLTFQSVYHFTNSGQ-LYSQAQKNYPYSPRWDGNEMAKR 361
BLAST of DY305169 vs. ExPASy Swiss-Prot
Match: BRE_BRAFL (BRCA1-A complex subunit BRE OS=Branchiostoma floridae GN=BRE PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.396e-11 Identity = 41/143 (28.67%), Postives = 74/143 (51.75%), Query Frame = 3 Query: 153 VKLPPWLDGMCMAEYLPHLEETLERQVSEAVSLIEVRRRFIEALAPLFGRPI-ETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFN-SQGMPIKSPLLTDYPWSPRWEHSQMAERTFEFLVDESVNFKK 575 +++P + G C+ +Y+P +++ L++Q+ V + RR ++ A FG + E D+ + K + F F++ L ++FP+ P QS + + + G P S + YP+SPRW +MA R F++D FKK Sbjct: 234 LRIPRFPTGGCLMDYVPQVQDFLQKQIDHIVEGYQRRREYVAAFISRFGGSVLEYDAESFTKLSLVLEWNEFFFVLHIELPSRFPQDMPVFTFQSCYHLSKTNGEPYVS-VQKSYPYSPRWTGEEMAHRAKLFILDFIPQFKK 375
BLAST of DY305169 vs. ExPASy Swiss-Prot
Match: BRE_CHICK (BRCA1-A complex subunit BRE OS=Gallus gallus GN=BRE PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.061e-11 Identity = 44/145 (30.34%), Postives = 74/145 (51.03%), Query Frame = 3 Query: 105 KLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEETLERQVSEAVSLIEVRRRFIEALAPLFGRPI-ETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAER 533 KL +P ++ +L + +P + G C+ +Y+P + + L +V + RR +I A FG + E D+ + K + F FLV L FP+ QP+L QS +F + G + S +YP+SPRW+ ++MA+R Sbjct: 218 KLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCQLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLYFPRDQPTLTFQSVYHFTNSGQ-LYSQAQKNYPYSPRWDGNEMAKR 361
BLAST of DY305169 vs. ExPASy Swiss-Prot
Match: BRE_RAT (BRCA1-A complex subunit BRE OS=Rattus norvegicus GN=Bre PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.047e-11 Identity = 44/145 (30.34%), Postives = 73/145 (50.34%), Query Frame = 3 Query: 105 KLMSTPALK-SLFSVDDVKLPPWLDGMCMAEYLPHLEETLERQVSEAVSLIEVRRRFIEALAPLFGRPI-ETDSVFYRKSMFFVASGAFSFLVLFFLSTQFPKQQPSLMLQSSMYFNSQGMPIKSPLLTDYPWSPRWEHSQMAER 533 KL +P ++ +L + +P + G C+ +Y+P + L +V + RR +I A FG + E D+ + K + F FLV L FP+ QP+L QS +F + G + S +YP+SPRW+ ++MA+R Sbjct: 218 KLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLLLMWKEFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQ-LYSQAQKNYPYSPRWDGNEMAKR 361 The following BLAST results are available for this feature:
BLAST of DY305169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305169 ID=DY305169; Name=DY305169; organism=Citrus clementina; type=EST; length=1248bpback to top |