FC868831
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868831 vs. ExPASy Swiss-Prot
Match: AMT13_ARATH (Ammonium transporter 1 member 3 OS=Arabidopsis thaliana GN=AMT1-3 PE=1 SV=2) HSP 1 Score: 214.542 bits (545), Expect = 3.365e-55 Identity = 111/180 (61.67%), Postives = 125/180 (69.44%), Query Frame = 2 Query: 80 MATSLSCSADQLASFFGPNATDATSAASLICPQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDXXXXXXXXXXXXXXXXXXTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWXXXXXXXXXXXXXXXERTQFVAYLIYSSFLTGFVYLVVSHW 619 M+ +++CSA LA+ GPNAT +AA IC QL +NNKF+D A+A+D+TYLLFSAYLVF+MQLGFAMLCAGSVRAKNTMNIMLTNVLD S GFIGRHNFAL+ FPT DYS+FLYQW ERTQFVAYLIYSSFLTGFVY VVSHW Sbjct: 1 MSGAITCSAADLATLLGPNAT---AAADYICGQLGTVNNKFTDAAFAIDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAFGGSSEGFIGRHNFALRDFPTPTADYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 177
BLAST of FC868831 vs. ExPASy Swiss-Prot
Match: AMT11_ARATH (Ammonium transporter 1 member 1 OS=Arabidopsis thaliana GN=AMT1-1 PE=1 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 7.497e-55 Identity = 112/176 (63.64%), Postives = 123/176 (69.89%), Query Frame = 2 Query: 92 LSCSADQLASFFGPNATDATSAASLICPQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDXXXXXXXXXXXXXXXXXXTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWXXXXXXXXXXXXXXXERTQFVAYLIYSSFLTGFVYLVVSHW 619 +SCSA LA GPNAT +AA+ IC QL +NNKF DTA+A+D+TYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLD +PSNGFIG+H F LK PT++ DYS FLYQW ERTQFVAYLIYSSFLTGFVY VVSHW Sbjct: 1 MSCSATDLAVLLGPNAT---AAANYICGQLGDVNNKFIDTAFAIDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAFGSPSNGFIGKHYFGLKDIPTASADYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 173
BLAST of FC868831 vs. ExPASy Swiss-Prot
Match: AMT15_ARATH (Putative ammonium transporter 1 member 5 OS=Arabidopsis thaliana GN=AMT1-5 PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.279e-54 Identity = 109/180 (60.56%), Postives = 127/180 (70.56%), Query Frame = 2 Query: 80 MATSLSCSADQLASFFGPNATDATSAASLICPQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDXXXXXXXXXXXXXXXXXXTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWXXXXXXXXXXXXXXXERTQFVAYLIYSSFLTGFVYLVVSHW 619 M+ +++CSA L++ GPNAT +AA IC QL ++NNKF+D AYA+D+TYLLFSAYLVF+MQLGFAMLCAGSVRAKNTMNIMLTNVLD S+GFIGRHNF L++FPT DYS+FLYQW ERT+FVAYLIYSSFLTGFVY VVSHW Sbjct: 1 MSGAITCSAADLSALLGPNAT---AAADYICGQLGSVNNKFTDAAYAIDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAFGESSDGFIGRHNFGLQNFPTLTSDYSFFLYQWAFAIAAAGITSGSIAERTKFVAYLIYSSFLTGFVYPVVSHW 177
BLAST of FC868831 vs. ExPASy Swiss-Prot
Match: AMT12_SOLLC (Ammonium transporter 1 member 2 OS=Solanum lycopersicum GN=AMT1-2 PE=2 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 9.164e-53 Identity = 106/180 (58.89%), Postives = 124/180 (68.89%), Query Frame = 2 Query: 80 MATSLSCSADQLASFFGPNATDATSAASLICPQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDXXXXXXXXXXXXXXXXXXTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWXXXXXXXXXXXXXXXERTQFVAYLIYSSFLTGFVYLVVSHW 619 MA++++CSA +L G +A +AT+AA IC + A++ ++T YAVD+TYLLFSAYLVF+MQLGFAMLCAGSVRAKNTMNIMLTNVLD PSNGFIG+H F LK FP+ FDYSYFLYQW ERTQFVAYLIYSSFLTGFVY +VSHW Sbjct: 1 MASAMTCSAAELFPHLGSSA-NATAAAEFICSRFSAVSEYLTNTTYAVDTTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGFSYYLFGFAFAFGAPSNGFIGKHFFGLKEFPSQAFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHW 179
BLAST of FC868831 vs. ExPASy Swiss-Prot
Match: AMT11_SOLLC (Ammonium transporter 1 member 1 OS=Solanum lycopersicum GN=AMT1-1 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 1.563e-52 Identity = 107/176 (60.80%), Postives = 119/176 (67.61%), Query Frame = 2 Query: 92 LSCSADQLASFFGPNATDATSAASLICPQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDXXXXXXXXXXXXXXXXXXTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWXXXXXXXXXXXXXXXERTQFVAYLIYSSFLTGFVYLVVSHW 619 ++CS D LA F GPN T+A +AAS IC Q ++++F DT YA+DSTYLLFSAYLVFSMQLGFAML AGSVR NTMNIMLTNVLD PSNGFIGRH F LK P+++FDY FLYQW ERTQFVAYLIYSSFLTGFVY VVSHW Sbjct: 1 MACSVDTLAPFLGPNTTNAVAAASYICNQFSGVSDRFVDTGYAIDSTYLLFSAYLVFSMQLGFAMLLAGSVR--NTMNIMLTNVLDAAAGGLFYYLFGFAFALGGPSNGFIGRHFFGLKEIPSNSFDYMNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 174
BLAST of FC868831 vs. ExPASy Swiss-Prot
Match: AMT14_ARATH (Ammonium transporter 1 member 4 OS=Arabidopsis thaliana GN=AMT1-4 PE=1 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 3.482e-52 Identity = 105/182 (57.69%), Postives = 120/182 (65.93%), Query Frame = 2 Query: 80 MATSLSCSADQLASFF--GPNATDATSAASLICPQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDXXXXXXXXXXXXXXXXXXTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWXXXXXXXXXXXXXXXERTQFVAYLIYSSFLTGFVYLVVSHW 619 MA++LSCSA L G NAT A +AA IC + + + KF+D AYA+D+TYLLFSAYLVF+MQLGFAMLCAGSVRAKNTMNIMLTNV+D +PSNGFIG+H F + FP FDY YFLYQW ERTQFVAYLIYSSFLTG VY +VSHW Sbjct: 1 MASALSCSASDLIPLLSGGANATAAAAAAEYICGRFDTVAGKFTDAAYAIDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVIDAAAGGLFYYLFGFAFAFGSPSNGFIGKHFFGMYDFPQPTFDYPYFLYQWTFAIAAAGITSGSIAERTQFVAYLIYSSFLTGLVYPIVSHW 182
BLAST of FC868831 vs. ExPASy Swiss-Prot
Match: AMT12_ARATH (Ammonium transporter 1 member 2 OS=Arabidopsis thaliana GN=AMT1-2 PE=1 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.049e-48 Identity = 104/180 (57.78%), Postives = 121/180 (67.22%), Query Frame = 2 Query: 95 SCSADQLASFFGP--NATDATSAASLICPQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDXXXXXXXXXXXXXXXXXXTPSNGFIGRHN--FALKSFP-TSNFDYSYFLYQWXXXXXXXXXXXXXXXERTQFVAYLIYSSFLTGFVYLVVSHW 619 +CSA L++ N+T + +AA+ +C Q+ I+NK SDT YAVD+TYLLFSAYLVF+MQLGFAMLCAGSVRAKNTMNIMLTNVLD TPSNGFIGRH+ FAL S+P D+S+FLYQW ERTQFVAYLIYS+FLTGFVY VSHW Sbjct: 7 TCSAVDLSALLSSSSNSTSSLAAATFLCSQISNISNKLSDTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGAISYYLFGFAFAFGTPSNGFIGRHHSFFALSSYPERPGSDFSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSTFLTGFVYPTVSHW 186
BLAST of FC868831 vs. ExPASy Swiss-Prot
Match: AMT11_ORYSJ (Ammonium transporter 1 member 1 OS=Oryza sativa subsp. japonica GN=AMT1-1 PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.417e-45 Identity = 100/175 (57.14%), Postives = 113/175 (64.57%), Query Frame = 2 Query: 95 SCSADQLASFFGPNATDATSAASLICPQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDXXXXXXXXXXXXXXXXXXTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWXXXXXXXXXXXXXXXERTQFVAYLIYSSFLTGFVYLVVSHW 619 +C+AD LA GP A +AT +C N+F+DT AVD+TYLLFSAYLVF+MQLGFAMLCAGSVRAKNTMNIMLTNVLD TPSNGFIG+ F LK P + FDY +FL+QW ERTQFVAYLIYS+FLTGFVY VVSHW Sbjct: 3 TCAAD-LAPLLGPVAANATD---YLC-------NRFADTTSAVDATYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFAFAFGTPSNGFIGKQFFGLKHMPQTGFDYDFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSAFLTGFVYPVVSHW 166
BLAST of FC868831 vs. ExPASy Swiss-Prot
Match: AMT12_ORYSJ (Ammonium transporter 1 member 2 OS=Oryza sativa subsp. japonica GN=AMT1-2 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.157e-45 Identity = 99/176 (56.25%), Postives = 110/176 (62.50%), Query Frame = 2 Query: 92 LSCSADQLASFFGPNATDATSAASLICPQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDXXXXXXXXXXXXXXXXXXTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWXXXXXXXXXXXXXXXERTQFVAYLIYSSFLTGFVYLVVSHW 619 ++ AD L G T A +A +C N+F+DT AVDSTYLLFSAYLVF+MQLGFAMLCAGSVRAKNTMNIMLTNVLD PSNGFIG+H F LK P FDYS+FL+QW ERTQFVAYLIYS+FLTGFVY VVSHW Sbjct: 1 MATCADTLGPLLG---TAAANATDYLC-------NQFADTTSAVDSTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFAFAFGAPSNGFIGKHFFGLKQVPQVGFDYSFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSAFLTGFVYPVVSHW 166
BLAST of FC868831 vs. ExPASy Swiss-Prot
Match: AMT13_ORYSJ (Ammonium transporter 1 member 3 OS=Oryza sativa subsp. japonica GN=AMT1-3 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 3.859e-43 Identity = 97/180 (53.89%), Postives = 113/180 (62.78%), Query Frame = 2 Query: 80 MATSLSCSADQLASFFGPNATDATSAASLICPQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDXXXXXXXXXXXXXXXXXXTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWXXXXXXXXXXXXXXXERTQFVAYLIYSSFLTGFVYLVVSHW 619 MAT L D L G A ++T AA+ IC N+F+DT+ AVD+TYLLFSAYLVF+MQLGFAMLCAGSVRAKN+MNIMLTNVLD TPS GFIG+ F LK P + +DY +FL+QW ERT+F AYLIYS+FLTGFVY VVSHW Sbjct: 1 MATCL----DSLGPLLG-GAANSTDAANYIC-------NRFTDTSSAVDATYLLFSAYLVFAMQLGFAMLCAGSVRAKNSMNIMLTNVLDAAAGALFYYLFGFAFAFGTPSKGFIGKQFFGLKHMPQTGYDYDFFLFQWAFAIAAAGITSGSIAERTRFSAYLIYSAFLTGFVYPVVSHW 168 The following BLAST results are available for this feature:
BLAST of FC868831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868831 ID=FC868831; Name=FC868831; organism=Citrus clementina; type=EST; length=619bpback to top |