FC868896
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868896 vs. ExPASy Swiss-Prot
Match: CYSK_CITLA (Cysteine synthase OS=Citrullus lanatus PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.264e-24 Identity = 54/66 (81.82%), Postives = 60/66 (90.91%), Query Frame = 1 Query: 100 KCEIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGK 297 K I KDVTELIG+TP+VYLN VVDGCVAR+AAKLEMM+PCSSVKDRI YSMI DAE+KGLITPG+ Sbjct: 5 KSTIAKDVTELIGNTPLVYLNRVVDGCVARVAAKLEMMEPCSSVKDRIGYSMISDAENKGLITPGE 70
BLAST of FC868896 vs. ExPASy Swiss-Prot
Match: CYSK_SOLTU (Cysteine synthase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.803e-24 Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 1 Query: 97 DKCEIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGK 297 +K I KDVTELIG+TP+VYLNNVVDGCVAR+AAKLE M+PCSSVKDRI YSMI DAE+KGLI PG+ Sbjct: 4 EKIGIAKDVTELIGNTPLVYLNNVVDGCVARVAAKLESMEPCSSVKDRIGYSMITDAEEKGLIKPGE 70
BLAST of FC868896 vs. ExPASy Swiss-Prot
Match: CYSK1_ORYSJ (Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS1 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 4.066e-23 Identity = 51/63 (80.95%), Postives = 56/63 (88.89%), Query Frame = 1 Query: 109 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGK 297 I KDVTELIG+TP+VYLN V DGCV R+AAKLE M+PCSSVKDRI YSMI DAE+KGLITPGK Sbjct: 5 IAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGLITPGK 67
BLAST of FC868896 vs. ExPASy Swiss-Prot
Match: CYSK_SPIOL (Cysteine synthase OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.018e-22 Identity = 51/69 (73.91%), Postives = 58/69 (84.06%), Query Frame = 1 Query: 91 MEDKCEIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGK 297 +E+K I KDVTELIG TP+VYLN V DGCVAR+AAKLE M+PCSSVKDRI +SMI DAE GLITPG+ Sbjct: 2 VEEKAFIAKDVTELIGKTPLVYLNTVADGCVARVAAKLEGMEPCSSVKDRIGFSMITDAEKSGLITPGE 70 HSP 2 Score: 67.781 bits (164), Expect = 6.036e-11 Identity = 34/45 (75.56%), Postives = 40/45 (88.89%), Query Frame = 3 Query: 543 KTVLIEITSGNTGIGLAFIAASRGYKLIIIMPXTYSIERRIILRA 677 ++VLIE TSGNTGIGLAFIAA++GYKLII MP + S+ERR ILRA Sbjct: 70 ESVLIEPTSGNTGIGLAFIAAAKGYKLIITMPASMSLERRTILRA 114
BLAST of FC868896 vs. ExPASy Swiss-Prot
Match: CYSK1_BRAJU (Cysteine synthase OS=Brassica juncea PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.635e-22 Identity = 49/63 (77.78%), Postives = 56/63 (88.89%), Query Frame = 1 Query: 109 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGK 297 I KDVTELIG+TP+VYLNNV +GCV R+AAKLEMM+PCSSVKDRI +SMI DAE KGLI PG+ Sbjct: 5 IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEQKGLIKPGE 67
BLAST of FC868896 vs. ExPASy Swiss-Prot
Match: CYSK1_ARATH (Cysteine synthase OS=Arabidopsis thaliana GN=OASA1 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 3.442e-22 Identity = 49/63 (77.78%), Postives = 56/63 (88.89%), Query Frame = 1 Query: 109 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGK 297 I KDVTELIG+TP+VYLNNV +GCV R+AAKLEMM+PCSSVKDRI +SMI DAE KGLI PG+ Sbjct: 5 IAKDVTELIGNTPLVYLNNVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGE 67
BLAST of FC868896 vs. ExPASy Swiss-Prot
Match: CYSK_WHEAT (Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.495e-22 Identity = 49/63 (77.78%), Postives = 54/63 (85.71%), Query Frame = 1 Query: 109 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGK 297 I KDVTELIG+TP+VYLN V DGCV R+AAKLE M+PCSSVKDRI YSMI DAE+KG I PGK Sbjct: 9 IAKDVTELIGNTPLVYLNKVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGFIVPGK 71
BLAST of FC868896 vs. ExPASy Swiss-Prot
Match: CYSK2_ORYSJ (Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS3 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.871e-22 Identity = 50/63 (79.37%), Postives = 56/63 (88.89%), Query Frame = 1 Query: 109 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGK 297 I DVT LIG+TP+VYLN VVDGC A+IAAKLE+M+PCSSVKDRI YSMI DAE+KGLITPGK Sbjct: 8 IASDVTALIGNTPLVYLNKVVDGCEAQIAAKLEIMEPCSSVKDRIGYSMITDAEEKGLITPGK 70 HSP 2 Score: 67.781 bits (164), Expect = 6.036e-11 Identity = 33/45 (73.33%), Postives = 41/45 (91.11%), Query Frame = 3 Query: 543 KTVLIEITSGNTGIGLAFIAASRGYKLIIIMPXTYSIERRIILRA 677 K+VLIE TSGNTGIGLAF+AA++GYKLI+ MP + S+ERRIIL+A Sbjct: 70 KSVLIEPTSGNTGIGLAFMAAAKGYKLILTMPASMSMERRIILKA 114
BLAST of FC868896 vs. ExPASy Swiss-Prot
Match: CYSK_MAIZE (Cysteine synthase OS=Zea mays PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21 Identity = 49/62 (79.03%), Postives = 53/62 (85.48%), Query Frame = 1 Query: 109 IKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPG 294 I KDVTELIG+TP+VYLN V DGCV R AKLE M+PCSSVKDRI YSMI DAE+KGLITPG Sbjct: 8 IAKDVTELIGNTPLVYLNKVTDGCVGRSRAKLESMEPCSSVKDRIGYSMITDAEEKGLITPG 69
BLAST of FC868896 vs. ExPASy Swiss-Prot
Match: CYSK2_BRAJU (Cysteine synthase OS=Brassica juncea PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21 Identity = 48/69 (69.57%), Postives = 57/69 (82.61%), Query Frame = 1 Query: 91 MEDKCEIKKDVTELIGHTPMVYLNNVVDGCVARIAAKLEMMQPCSSVKDRIAYSMIKDAEDKGLITPGK 297 M + I DVTELIG+TP+VYLN+V +GCV R+AAKLEMM+PCSSVKDRI +SMI DAE KGLI PG+ Sbjct: 1 MASRIGIANDVTELIGNTPLVYLNSVAEGCVGRVAAKLEMMEPCSSVKDRIGFSMISDAEKKGLIKPGE 69 The following BLAST results are available for this feature:
BLAST of FC868896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868896 ID=FC868896; Name=FC868896; organism=Citrus clementina; type=EST; length=679bpback to top |