FC872530
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872530 vs. ExPASy Swiss-Prot
Match: RHM1_ARATH (Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana GN=RHM1 PE=2 SV=1) HSP 1 Score: 483.026 bits (1242), Expect = 8.756e-136 Identity = 228/282 (80.85%), Postives = 252/282 (89.36%), Query Frame = 3 Query: 3 GLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEENKAVSSVSTNNIQSRMVVPVSKCS-SPRKPSMKFLIYGRTGWIXXXXXXXXXXXXIPFEYGKGRLEDRSSLIADVQSVKPTHGFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCREHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWN 845 GL+KT++WYTQNP+WWGDVSGALLPHPRMLMMPGGRHFDGSE+N +++S Q+ MVVP + + +P+KPS+KFLIYG+TGWI I +EYGKGRLEDRSSL+ D+QSVKPTH FN+AGVTGRPNVDWCESHKT+TIR NVAGTLTLADVCREHG+LMMN+ATGCIFEYD HPEGSGIG+KEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNL+GIWN Sbjct: 311 GLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRHFDGSEDNSLAATLSEKPSQTHMVVPSQRSNGTPQKPSLKFLIYGKTGWIGGLLGKICDKQGIAYEYGKGRLEDRSSLLQDIQSVKPTHVFNSAGVTGRPNVDWCESHKTETIRANVAGTLTLADVCREHGLLMMNFATGCIFEYDDKHPEGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLKGIWN 592
BLAST of FC872530 vs. ExPASy Swiss-Prot
Match: RHM3_ARATH (Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana GN=RHM3 PE=2 SV=1) HSP 1 Score: 457.218 bits (1175), Expect = 5.145e-128 Identity = 218/281 (77.58%), Postives = 242/281 (86.12%), Query Frame = 3 Query: 3 GLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEENKAVSSVSTNNIQSRMVVPVSKCSSPRKPSMKFLIYGRTGWIXXXXXXXXXXXXIPFEYGKGRLEDRSSLIADVQSVKPTHGFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCREHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWN 845 GLRKT+EWYT+NP+WWGDVSGALLPHPRMLMMPG RH DGS+E+K T + V P S K S+KFLIYG+TGW+ IP+EYGKGRLEDR+SLIAD++S+KP+H FNAAG+TGRPNVDWCESHKT+TIR NVAGTLTLADVCRE+ +LMMN+ATGCIFEYDAAHPEGSGIG+KEED PNFTGSFYSKTKAMVEELL+E+DNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMT+LDELLPISIEMAKRNLRGIWN Sbjct: 311 GLRKTMEWYTENPEWWGDVSGALLPHPRMLMMPGDRHSDGSDEHKNADGNQTFTV----VTPTKAGCSGDKRSLKFLIYGKTGWLGGLLGKLCEKQGIPYEYGKGRLEDRASLIADIRSIKPSHVFNAAGLTGRPNVDWCESHKTETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDAAHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTILDELLPISIEMAKRNLRGIWN 587
BLAST of FC872530 vs. ExPASy Swiss-Prot
Match: RHM2_ARATH (Probable rhamnose biosynthetic enzyme 2 OS=Arabidopsis thaliana GN=RHM2 PE=1 SV=1) HSP 1 Score: 450.669 bits (1158), Expect = 4.816e-126 Identity = 217/281 (77.22%), Postives = 241/281 (85.77%), Query Frame = 3 Query: 3 GLRKTIEWYTQNPDWWGDVSGALLPHPRMLMMPGGRHFDGSEENKAVSSVSTNNIQSRMVVPVSKCSSPRKPSMKFLIYGRTGWIXXXXXXXXXXXXIPFEYGKGRLEDRSSLIADVQSVKPTHGFNAAGVTGRPNVDWCESHKTDTIRTNVAGTLTLADVCREHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWN 845 GL+KT++WYTQNP+WWGDVSGALLPHPRMLMMPGGR DGS E K VSS N +Q+ VV S K S+KFLIYG+TGW+ I +EYGKGRLEDR+SL+AD++S+KPTH FNAAG+TGRPNVDWCESHK +TIR NVAGTLTLADVCRE+ +LMMN+ATGCIFEYDA HPEGSGIG+KEED PNF GSFYSKTKAMVEELL+E+DNVCTLRVRMPISSDLNNPRNFITKISRYNKVV+IPNSMTVLDELLPISIEMAKRNLRGIWN Sbjct: 313 GLKKTMDWYTQNPEWWGDVSGALLPHPRMLMMPGGRLSDGSSEKKDVSS---NTVQTFTVVTPKNGDSGDKASLKFLIYGKTGWLGGLLGKLCEKQGITYEYGKGRLEDRASLVADIRSIKPTHVFNAAGLTGRPNVDWCESHKPETIRVNVAGTLTLADVCRENDLLMMNFATGCIFEYDATHPEGSGIGFKEEDKPNFFGSFYSKTKAMVEELLREFDNVCTLRVRMPISSDLNNPRNFITKISRYNKVVDIPNSMTVLDELLPISIEMAKRNLRGIWN 590
BLAST of FC872530 vs. ExPASy Swiss-Prot
Match: YL780_MIMIV (Uncharacterized protein L780 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L780 PE=4 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 6.467e-30 Identity = 75/214 (35.05%), Postives = 117/214 (54.67%), Query Frame = 3 Query: 222 MKFLIYGRTGWIXXXXXXXXXXXXIPFEYGKGRLEDRSSLIADVQSVKPTHGFNAAGVTGRPN---VDWCESHK--TDTIRTNVAGTLTLADVCREHGILMMNYATGCIFEYDAAHPEGSGIGYKEEDTPNFTGSFYSKTKAMVEELLKEYDN-VCTLRVRMPISSDLNNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWN 845 MK+LI+G GWI + R +D S++ ++ +KP + G T P +D+ E + ++ N+ G L LA +C+++ I + TGCIFE + G+ E D PNF GS YS K + L+ +DN V LR+RMPI+ + NPR+FITKI Y+++ +IPNSMT+LD+++P+ I+MA+ G +N Sbjct: 1 MKWLIFGNKGWIGSMVSKILEQQGEQVVGAQSRADDESAVEREISEIKPDRVMSFIGRTHGPGYSTIDYLEQSGKLVENVKDNLYGPLCLAFICQKYNIHLTYLGTGCIFE-GQNNFSADEKGFTENDKPNFFGSSYSVVKGFTDRLMHFFDNDVLNLRIRMPITIE-QNPRSFITKILSYSRICSIPNSMTILDQMIPVMIDMARNKTTGTFN 212 The following BLAST results are available for this feature:
BLAST of FC872530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872530 ID=FC872530; Name=FC872530; organism=Citrus clementina; type=EST; length=846bpback to top |