FC872639
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872639 vs. ExPASy Swiss-Prot
Match: RPIA_ARATH (Probable ribose-5-phosphate isomerase OS=Arabidopsis thaliana GN=At2g01290 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.016e-31 Identity = 71/117 (60.68%), Postives = 85/117 (72.65%), Query Frame = 1 Query: 4 VVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGE--QPFVTDNGNYVXXXXXXXXXXXXXVASDNILRLAGVVEHGMFLDMATTVIVASELGVTIRN 348 VVIVD+SK+V H+GGS LA+PVE+VP+CWKFTA++L+ L E GC A LR GE + FVTDNGNY+ SD ILRL GVVEHGMFLDMA+TVI+A ELGV I+N Sbjct: 148 VVIVDDSKMVKHIGGSKLALPVEIVPFCWKFTAEKLRSLLEGYGCEANLR-LGEKGKAFVTDNGNYIVDMHVEEDMGDLGAVSDAILRLPGVVEHGMFLDMASTVIIAGELGVKIKN 263
BLAST of FC872639 vs. ExPASy Swiss-Prot
Match: RPIA_BACSK (Ribose-5-phosphate isomerase A OS=Bacillus clausii (strain KSM-K16) GN=rpiA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.273e-15 Identity = 48/111 (43.24%), Postives = 67/111 (60.36%), Query Frame = 1 Query: 4 VVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQPFVTDNGNYVXXXXXXXXXXXXXVASDNILRLAGVVEHGMFLDMATTVIVASELGV 336 VV+ DESKLV LG +PVE++P+ W+ TA R++ L G VA LR TG+ PFV+DN N++ + + + +L GVVE G+FLDMA IVAS+ G+ Sbjct: 114 VVLADESKLVEELGA--FKLPVEIIPFGWETTAMRIEAL----GGVASLRQTGKSPFVSDNHNWILDCDFGNIRDPYSL-HEKVKKLVGVVETGLFLDMACEAIVASKNGI 217
BLAST of FC872639 vs. ExPASy Swiss-Prot
Match: RPIA1_OCEIH (Ribose-5-phosphate isomerase A 1 OS=Oceanobacillus iheyensis GN=rpiA1 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.638e-15 Identity = 46/114 (40.35%), Postives = 67/114 (58.77%), Query Frame = 1 Query: 4 VVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQPFVTDNGNYVXXXXXXXXXXXXXVASDNILRLAGVVEHGMFLDMATTVIVASELGVTIR 345 V+IVD+SK+V LG ++PVEV+P+ W+ TA + L GCV +R E+P VTDNGNY+ + + I + GV+E G+F+DMATTVIV + + I+ Sbjct: 118 VIIVDQSKVVETLGE--FSLPVEVLPFSWQRTANEISKL----GCVPTVRVHEEEPLVTDNGNYILDCPFKVIPHPDKL-NKEIKSIVGVIETGLFIDMATTVIVGEKDNIYIK 224
BLAST of FC872639 vs. ExPASy Swiss-Prot
Match: RPIA_BACWK (Ribose-5-phosphate isomerase A OS=Bacillus weihenstephanensis (strain KBAB4) GN=rpiA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.247e-13 Identity = 39/111 (35.14%), Postives = 60/111 (54.05%), Query Frame = 1 Query: 4 VVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQPFVTDNGNYVXXXXXXXXXXXXXVASDNILRLAGVVEHGMFLDMATTVIVASELGV 336 ++I DESKLV HLG +P+E++ + WK T KR+Q L GC LR +PF+TDNGN + + + GVVE G+F++M + I+ ++ G+ Sbjct: 114 IIIADESKLVSHLGT--FPLPIEIISFSWKQTEKRIQSL----GCETHLRMKDSRPFITDNGNLIIDCIFPNKILNPNDTHTELKMITGVVETGLFINMKSKAIIGTKNGI 218
BLAST of FC872639 vs. ExPASy Swiss-Prot
Match: RPIA_BACCR (Ribose-5-phosphate isomerase A OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rpiA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.801e-12 Identity = 36/111 (32.43%), Postives = 58/111 (52.25%), Query Frame = 1 Query: 4 VVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQPFVTDNGNYVXXXXXXXXXXXXXVASDNILRLAGVVEHGMFLDMATTVIVASELGV 336 ++I DESKLV HLG +P+E++P+ WK T ++Q L GC LR + ++TDN N + + + GVVE G+F+ M +T I+ ++ G+ Sbjct: 113 IIIADESKLVTHLGT--FPLPIEIIPFSWKQTENKIQSL----GCQTTLRLKNNETYITDNNNMIIDCIFPNHISNPVHLHTQLKMITGVVETGLFISMTSTAIIGTKNGI 217
BLAST of FC872639 vs. ExPASy Swiss-Prot
Match: RPIA_THERP (Ribose-5-phosphate isomerase A OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=rpiA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.352e-12 Identity = 46/113 (40.71%), Postives = 64/113 (56.64%), Query Frame = 1 Query: 4 VVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQPFVTDNGNYVXXXXXXXXXXXXXVASDNILRLAGVVEHGMFLDMATTVIVASELGVTI 342 V+I+D+SKLV LG +PVEVVP+ W++ A+ L+DL + R TG PF +DNGN + + I L GV++HG+FLDMA VIV SE G+ + Sbjct: 117 VIIIDDSKLVAALGAR-FPLPVEVVPFGWRWCARWLEDL--GGRPTLRCRPTGH-PFRSDNGNLILDVAFGAIADPAWL-DRTIKMLPGVIDHGLFLDMADLVIVGSETGIRL 224
BLAST of FC872639 vs. ExPASy Swiss-Prot
Match: RPIA_BACC1 (Ribose-5-phosphate isomerase A OS=Bacillus cereus (strain ATCC 10987) GN=rpiA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.352e-12 Identity = 37/111 (33.33%), Postives = 60/111 (54.05%), Query Frame = 1 Query: 4 VVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQPFVTDNGNYVXXXXXXXXXXXXXVASDNILRLAGVVEHGMFLDMATTVIVASELGV 336 ++I DESKLV HLG +PVE++P+ WK T ++Q L GC LR + F+TDN N + +++ + GVVE G+F++M + I+ ++ G+ Sbjct: 113 LIIADESKLVTHLGT--FPLPVEIIPFSWKQTESKIQSL----GCQTTLRLKNNETFITDNNNMIIDCVFPHNITNPANLHNHLKMITGVVETGLFVNMTSKAIIGTKNGI 217
BLAST of FC872639 vs. ExPASy Swiss-Prot
Match: RPIA_GLOVI (Ribose-5-phosphate isomerase A OS=Gloeobacter violaceus GN=rpiA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.844e-12 Identity = 44/113 (38.94%), Postives = 63/113 (55.75%), Query Frame = 1 Query: 4 VVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQPFVTDNGNYVXXXXXXXXXXXXXVASDNILRLAGVVEHGMFLDMATTVIVASELGVTI 342 ++IVD +KLV LG G +PVEV P+ W+ TA+ L+ L G LR Q F+TD G+Y+ + + I R+ GVVE G+F+ MA+ VIVA E G+ + Sbjct: 117 IIIVDATKLVEQLGSHG-PLPVEVAPFGWQATARALERL----GAEVNLRAQHGQAFLTDGGHYILDCRFGPIARPAELEAA-IDRIPGVVESGLFVGMASAVIVADEGGIEV 223
BLAST of FC872639 vs. ExPASy Swiss-Prot
Match: RPIA_STAES (Ribose-5-phosphate isomerase A OS=Staphylococcus epidermidis (strain ATCC 12228) GN=rpiA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.939e-12 Identity = 44/115 (38.26%), Postives = 65/115 (56.52%), Query Frame = 1 Query: 4 VVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQPFVTDNGNYVXXXXXXXXXXXXXVASDNILRLAGVVEHGMFLDMATTVIVASELGVTIRN 348 VV+VDESKLV +LG + A+PVEV + W AK+++ ++ R + PF+TDNGNY+ + + ++ L GV+E G FLD+A VIV ++ GV I N Sbjct: 118 VVVVDESKLVNYLGET-FALPVEVDKFNWYQVAKKIERTYD---IHVSRRVNEDVPFITDNGNYILDCSLQNRIPAYEL-HEFLIHLTGVLETGYFLDIADQVIVGTQEGVKILN 227
BLAST of FC872639 vs. ExPASy Swiss-Prot
Match: RPIA_STAEQ (Ribose-5-phosphate isomerase A OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=rpiA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.939e-12 Identity = 44/115 (38.26%), Postives = 65/115 (56.52%), Query Frame = 1 Query: 4 VVIVDESKLVPHLGGSGLAMPVEVVPYCWKFTAKRLQDLFEDCGCVAKLRTTGEQPFVTDNGNYVXXXXXXXXXXXXXVASDNILRLAGVVEHGMFLDMATTVIVASELGVTIRN 348 VV+VDESKLV +LG + A+PVEV + W AK+++ ++ R + PF+TDNGNY+ + + ++ L GV+E G FLD+A VIV ++ GV I N Sbjct: 118 VVVVDESKLVNYLGET-FALPVEVDKFNWYQVAKKIERTYD---IHVSRRVNEDVPFITDNGNYILDCSLQNRIPAYEL-HEFLIHLTGVLETGYFLDIADQVIVGTQEGVKILN 227 The following BLAST results are available for this feature:
BLAST of FC872639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872639 ID=FC872639; Name=FC872639; organism=Citrus clementina; type=EST; length=765bpback to top |