FC872866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 3.450e-47 Identity = 83/130 (63.85%), Postives = 103/130 (79.23%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 395 N NY +CG A+GVDLLNNPDL+ATDPV+SFK+A+WFWMT Q PKPSCH+VI W PS+ + AGRLPGYG TNIINGG+ECG+G + V++RIGF+ +C FGI GDNLDCY+QRP+G +L S+ Sbjct: 187 NYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFYKRYCDIFGIGYGDNLDCYSQRPFGSSLPLSSI 316
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 7.685e-47 Identity = 81/130 (62.31%), Postives = 102/130 (78.46%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 395 N NY CG A+GVDLLNNPDL+ATDPV+SFKSA+WFWMT Q PKPSCH+VII W+PS+ + A RLPG+G+ TNIINGG+ECG+G + V++RIGF+ +C G+ PGDNLDC NQR +G L+ +M Sbjct: 195 NYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 324
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 186.422 bits (472), Expect = 7.685e-47 Identity = 82/130 (63.08%), Postives = 102/130 (78.46%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 395 N NY CG A+GVDLLNNPDL+ATDPV+SFKSA+WFWMT Q PKPSCH+VII W+PSA + A RLPG+G+ TNIINGG+ECG+G + V++RIGF+ +C G+ PGDNLDC NQR +G L+ +M Sbjct: 200 NYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 329
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 1.712e-46 Identity = 80/130 (61.54%), Postives = 100/130 (76.92%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 395 N NY CG A+GVDLLNNPDL+ATD V+SFKSAIWFWMT Q PKPSCH+VI W+PS ++ A R+PG+G+ TNIINGG+ECG G + V++RIGF+ +CG G+ PGDNLDC NQR +G L+ +M Sbjct: 189 NYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTM 318
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 3.814e-46 Identity = 80/130 (61.54%), Postives = 99/130 (76.15%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 395 N NY CG A+GVDLLNNPDL+ATDPV+SFKSAIWFWMT Q PKPSCH+VI W+PS + A R+PG+G+ TNIINGG+ECG G + V++RIGF+ +CG G+ PG+NLDC NQR +G L+ M Sbjct: 193 NYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGENLDCGNQRSFGNGLLVDIM 322
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 3.814e-46 Identity = 83/130 (63.85%), Postives = 96/130 (73.85%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 395 N NY +CG A+GVDLLNNPDLLATDP +SFKSA WFWMT Q PKPSCH+VII W PS + AGR+PG+GL TNIINGG+ECGQG N V +RIGF+ +C G+ G+NLDCYNQR Y SM Sbjct: 192 NYNYGQCGRAIGVDLLNNPDLLATDPTISFKSAFWFWMTPQSPKPSCHDVIIGAWSPSGSDQAAGRVPGFGLITNIINGGLECGQGWNAKVEDRIGFYKRYCDTLGVGYGNNLDCYNQRSYNNGPSVDSM 321
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.110e-45 Identity = 79/130 (60.77%), Postives = 102/130 (78.46%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 395 N NY CG A+GVDLLNNPDL+ATDPV+SFK+A+WFWMT Q PKPSCH+VII W PS+ + A RLPG+G+ TNIINGG+ECG+G ++ V++RIGF+ +C G+ PGDNLDC NQR +G L+ ++ Sbjct: 199 NYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLECGRGTDNRVQDRIGFYRRYCSILGVTPGDNLDCVNQRWFGNALLVDTL 328
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.110e-45 Identity = 80/130 (61.54%), Postives = 98/130 (75.38%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 395 N NY +CG A+GVDLLNNPDLL++DP +SFKSA WFWMT Q PKPSCH VII W PS+ + AGR+PGYG+ TNIINGG+ECG+G N V +RIGF+ +C G+ G+NLDCYNQ P+G + SM Sbjct: 195 NYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVSVDSM 324
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.449e-45 Identity = 79/130 (60.77%), Postives = 99/130 (76.15%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPYGLNLMAQSM 395 N NY CG A+GVDLLNNPDL+ATD V+SFKSAIWFWMT Q PKPSCH+VI W+PS + A R+PG+G+ TNIINGG+ECG G + V++RIGF+ +CG G+ PGDNLDC NQR +G L+ ++ Sbjct: 189 NYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTV 318
BLAST of FC872866 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 181.8 bits (460), Expect = 1.893e-45 Identity = 79/121 (65.29%), Postives = 96/121 (79.34%), Query Frame = 3 Query: 6 NCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCYNQRPY 368 N NY CG A+GVDLLNNPDL+A D V++FK+AIWFWMTAQPPKPSCH VI +W+PS + AGRLPGYG+ TNIINGG+ECG+G + V +RIGF+ +C FG+ PG NLDCYNQR + Sbjct: 206 NYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDCYNQRSF 326 The following BLAST results are available for this feature:
BLAST of FC872866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC872866 ID=FC872866; Name=FC872866; organism=Citrus clementina; type=EST; length=553bpback to top |