FC872870
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB2_ANASP (Chaperone protein clpB 2 OS=Anabaena sp. (strain PCC 7120) GN=clpB2 PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 4.580e-28 Identity = 55/118 (46.61%), Postives = 86/118 (72.88%), Query Frame = 3 Query: 3 VDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFSNGQLP 356 ++A R+ FRPEF+NR+DE I+F LD+ ++ IV+LQ++R++ R+ DRK+ ++++D A+ L +GYDP +G RP+KR IQ+ +E ++AK ILRGEF D DTI +D + S +LP Sbjct: 749 MEAMRNSFRPEFLNRIDEVIIFHSLDKKELRQIVQLQVERLKARLDDRKISLRLSDVALDFLAEVGYDPVFGARPLKRAIQRELETQIAKAILRGEFNDGDTIFVDVQNERLSFSRLP 866
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_GLOVI (Chaperone protein clpB OS=Gloeobacter violaceus GN=clpB PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.273e-27 Identity = 59/120 (49.17%), Postives = 87/120 (72.50%), Query Frame = 3 Query: 24 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFSNGQLPQQKLVFRRL 383 FRPEF+NRVD+ I+F+ L RDQ+++IV+LQ+ R++KR+ADRK+ +++++AAI + GYDP YG RP+KR IQ + N LA+G+L+G+F D DTI +D E ++ VFRRL Sbjct: 757 FRPEFLNRVDDIIIFRNLRRDQLAAIVKLQIARLEKRLADRKITLKLSEAAIDYIVEAGYDPVYGARPLKRAIQNELVNPLARGLLKGDFNDGDTIFVDIE----------NERPVFRRL 866
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB1_THEEB (Chaperone protein clpB 1 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpB1 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.273e-27 Identity = 55/106 (51.89%), Postives = 81/106 (76.42%), Query Frame = 3 Query: 3 VDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 320 ++A R+ FRPEF+NRVDE+I+F L +DQ+ IV+LQ+ R+Q+R++DR + + +T+ AI L +GYDP YG RP+KR IQ+ +E +AK ILRG+F D DTI++D Sbjct: 748 MEAMRAHFRPEFLNRVDEFIIFHSLRKDQLRQIVQLQVQRLQQRLSDRHITLSLTEKAIDFLAEVGYDPVYGARPLKRAIQKQLETPIAKAILRGDFFDGDTILVD 853
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNE7 (Chaperone protein clpB 1 OS=Synechococcus elongatus (strain PCC 7942) GN=clpB1 PE=2 SV=3) HSP 1 Score: 119.783 bits (299), Expect = 1.128e-26 Identity = 59/128 (46.09%), Postives = 87/128 (67.97%), Query Frame = 3 Query: 6 DAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTEVTAFSNGQLPQQKLVFRRLDT 389 +A R+ FRPEF+NRVDE I+F L +DQ+ IVR+QL R+++R++DRK+ + ++ AI L +G+DP YG RP+KRVIQ+ +E +AK ILRG+F D DTI + E ++LVF+ + T Sbjct: 750 EALRANFRPEFLNRVDETIIFHSLRKDQLQQIVRIQLHRLEERLSDRKLSLSMSPEAIDFLVEIGFDPVYGARPLKRVIQRELETAIAKAILRGQFSDGDTIQVAVE----------NERLVFKAIAT 867
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_XANCP (Chaperone protein clpB OS=Xanthomonas campestris pv. campestris GN=clpB PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.598e-26 Identity = 53/101 (52.48%), Postives = 77/101 (76.24%), Query Frame = 3 Query: 24 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 326 FRPEF+NR+D+ +VF PLD+ QI SI R+QL ++KR+A+R +K+ + D A++LLG++G+DP YG RP+KR IQ VEN LA+ IL G++ DT+ + TE Sbjct: 752 FRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKLDLDDPALELLGNVGFDPVYGARPLKRAIQSQVENPLAQQILSGQYTSGDTVRVRTE 852
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNY3 (Chaperone protein clpB 2 OS=Synechocystis sp. (strain PCC 6803) GN=clpB2 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 9.550e-26 Identity = 50/106 (47.17%), Postives = 79/106 (74.53%), Query Frame = 3 Query: 3 VDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 320 +D R FRPEF+NRVDE I+F L + ++ SIV++Q+ + R+ ++K+ +++TD A+ L ++GYDP YG RP+KR +Q+Y+E +AKGILRG++K +TIV+D Sbjct: 749 MDVMRENFRPEFLNRVDETIIFHGLQKSELRSIVQIQIQSLATRLEEQKLTLKLTDKALDFLAAVGYDPVYGARPLKRAVQKYLETAIAKGILRGDYKPGETIVVD 854
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_XANAC (Chaperone protein clpB OS=Xanthomonas axonopodis pv. citri GN=clpB PE=3 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 4.739e-25 Identity = 51/96 (53.12%), Postives = 75/96 (78.12%), Query Frame = 3 Query: 24 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTI 311 FRPEF+NR+D+ +VF PLD+ QI SI R+QL ++KR+A+R +K+ + DAA+++LGS+G+DP YG RP+KR IQ VEN LA+ IL G++ D++ Sbjct: 752 FRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAERGLKLDLDDAALEVLGSVGFDPVYGARPLKRAIQSQVENPLAQQILSGQYLSGDSV 847
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_COREF (Chaperone protein clpB OS=Corynebacterium efficiens GN=clpB PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.352e-24 Identity = 47/106 (44.34%), Postives = 81/106 (76.42%), Query Frame = 3 Query: 3 VDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVID 320 +DA + F+PEF+NR+D+ +VF PL ++Q++SIV +Q+ ++ +R++DR++ ++V+DAA L GYDP YG RP++R+IQQ + ++LAK +L GE +D D +++D Sbjct: 733 MDAVKMAFKPEFINRLDDIVVFDPLSQEQLASIVEIQISQLAERLSDRRLTLRVSDAAKLWLAERGYDPAYGARPLRRLIQQAIGDQLAKELLAGEIRDGDRVLVD 838
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_XYLFT (Chaperone protein clpB OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=clpB PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 8.938e-24 Identity = 49/101 (48.51%), Postives = 74/101 (73.27%), Query Frame = 3 Query: 24 FRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTIVIDTE 326 FRPEF+NR+D+ +VF PLD+ QI I R+QL ++KR+A+ ++K+ + D A++LLG++G+DP YG RP+KR IQ +EN LA+ IL G F DT+ + + Sbjct: 752 FRPEFINRLDDIVVFHPLDKAQIKQIARIQLRGLEKRLAESELKLDLDDRALELLGNVGFDPVYGARPLKRAIQSQLENALAQQILAGAFVSGDTVQVGVD 852
BLAST of FC872870 vs. ExPASy Swiss-Prot
Match: CLPB_PSESM (Chaperone protein clpB OS=Pseudomonas syringae pv. tomato GN=clpB PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 8.938e-24 Identity = 53/112 (47.32%), Postives = 82/112 (73.21%), Query Frame = 3 Query: 3 VDAARSIFRPEFMNRVDEYIVFQPLDRDQISSIVRLQLDRVQKRIADRKMKMQVTDAAIQLLGSLGYDPNYGGRPVKRVIQQYVENELAKGILRGEFKDEDTI---VIDTEV 329 +DA + FRPEF+NR+DE ++F+PL RDQI+ I +QL R++KR+A+R++ M ++ A+ L ++GYDP YG RP+KR IQ+++EN LA+ IL G F+ +I V+D E+ Sbjct: 740 MDAVSTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELTMVLSPEALDKLIAVGYDPVYGARPLKRAIQRWIENPLAQLILSGGFEPGSSITGKVVDDEI 851 The following BLAST results are available for this feature:
BLAST of FC872870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 175
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Sequences
The
following sequences are available for this feature:
EST sequence >FC872870 ID=FC872870; Name=FC872870; organism=Citrus clementina; type=EST; length=620bpback to top |