FC875308
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875308 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 3.483e-35 Identity = 88/195 (45.13%), Postives = 106/195 (54.36%), Query Frame = 1 Query: 142 MCGGAIISGYIPPTVPGRPKKLTAEYLWPELK-------RSSNKKYSKPIVDDDFEADFQGFKXXXXXXXXXXXXXXXXXXXXXXXKPFTFSAGRK----------------SHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKGYFPDE 657 MCGGAIIS +IPP R ++T E++WP+LK + SNK+ +DDDFEADFQGFK KPF F+A K ++ V+ EQA+KS++RKRKNQYRGIRQRPWGKWAAEIRDP KG R WLGTF+T IRG KAK FP+E Sbjct: 1 MCGGAIISDFIPPP---RSLRVTNEFIWPDLKNKVKASKKRSNKRSDFFDLDDDFEADFQGFKDDSAFDCEDDDDVFVNV------KPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPEE 186
BLAST of FC875308 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.257e-33 Identity = 87/193 (45.08%), Postives = 106/193 (54.92%), Query Frame = 1 Query: 142 MCGGAIISGYIPPTVPGRPKKLTAEYLWPELKRS--SNKKYSKPI-----VDDDFEADFQGFKXXXXXXXXXXXXXXXXXXXXXXXKPFTFSAGRK------SHGSTAVKHVE----QAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKGYFPDETPAA 669 MCGGAIIS +IPP R +++T+E++WP+LK++ +KK SK D +FEADFQGFK KPF F++ K + GS K V A+KS RKRKNQYRGIRQRPWGKWAAEIRDP +G R+WLGTF T IRG KAK FP+E A Sbjct: 1 MCGGAIISDFIPPP---RSRRVTSEFIWPDLKKNLKGSKKSSKNRSNFFDFDAEFEADFQGFKDDSSIDCDDDFDVGDVFADV---KPFVFTSTPKPAVSAAAEGSVFGKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEENMKA 187
BLAST of FC875308 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.267e-25 Identity = 76/188 (40.43%), Postives = 93/188 (49.47%), Query Frame = 1 Query: 142 MCGGAIISGYIPPTVPGRP---KKLTAEYLWPELKR----SSNKKYSKPIV---DDDFEADFQGFKXXXXXXXXXXXXXXXXXXXXXXXKPFTFSAGRKSHGSTAVKHVE-QAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKGYFPDETPAAA 672 MCGGAII + G P ++ T LWPE K+ +++ V D+DFEADF+ F+ F + R + + + A KS +RKRKNQ+RGIRQRPWGKWAAEIRDP KGVRVWLGTFN+ IRGKKAK FP E P A Sbjct: 1 MCGGAIIHH-----LKGHPEGSRRATEGLLWPEKKKPRWGGGGRRHFGGFVEEDDEDFEADFEEFEVDSGDSDLELGEEDDDDVVEIKPAAFKRALSRDNLSTITTAGFDGPAAKSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFP-EAPTTA 182
BLAST of FC875308 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.242e-24 Identity = 71/171 (41.52%), Postives = 80/171 (46.78%), Query Frame = 1 Query: 142 MCGGAIISGYIPPTVPGRPKKLTAEYLWPELKRSSNKKYSKPIVDDDFEADFQGFKXXXXXXXXXXXXXXXXXXXXXXXKPFTFSAGRKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKGYFPD 654 MCGGAIIS Y P + +KLTAE LW EL S+ DDF + K + + AVK + + RKRKN YRGIR+RPWGKWAAEIRDP KGVRVWLGTFNT IRG KAK FPD Sbjct: 1 MCGGAIISDYAPLVTKAKGRKLTAEELWSELDASAA---------DDFWGFYSTSKLHP--------------------------TNQVNVKEEAVKKEQATEPGKRRKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPD 136
BLAST of FC875308 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.470e-17 Identity = 42/69 (60.87%), Postives = 49/69 (71.01%), Query Frame = 1 Query: 448 KKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKGYFPD 654 ++ +R+RKN YRGIRQRPWGKWAAEIRDP+KGVRVWLGTF T IRG+KAK FP+ Sbjct: 39 ERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFPN 107
BLAST of FC875308 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.176e-16 Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 1 Query: 460 ERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKGYFPDET 660 ++K+ ++Y+GIR+RPWG+WAAEIRDP KGVRVWLGTFNT IRG KAK FP+E+ Sbjct: 18 KKKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFPNES 84
BLAST of FC875308 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 6.829e-15 Identity = 40/92 (43.48%), Postives = 53/92 (57.61%), Query Frame = 1 Query: 382 PFTFSAGRKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKGYFPDE 657 P +F+ SH + + +A R++K +YRG+RQRPWGKWAAEIRDP + RVWLGTF+T RG KAK FP++ Sbjct: 45 PSSFARVDSSHNPIE-ESMSKAFPEEAREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPED 135
BLAST of FC875308 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.165e-14 Identity = 42/89 (47.19%), Postives = 50/89 (56.18%), Query Frame = 1 Query: 388 TFSAGRKSHGSTAVKHVEQAKKSTERK-RKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKGYFP 651 T S+ R+ S K E K +RK +KN YRG+RQRPWGK+AAEIRDP + RVWLGTF T RG +AK FP Sbjct: 104 TSSSNRRRESSPVAKKAEGGGKIRKRKNKKNGYRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFP 192
BLAST of FC875308 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.595e-14 Identity = 42/80 (52.50%), Postives = 46/80 (57.50%), Query Frame = 1 Query: 415 GSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKGYFPD 654 GS K E + S ER +K YRG+RQRPWGKWAAEIRDP K RVWLGTF T RG KAK FP+ Sbjct: 42 GSAVTKECESSM-SLERPKK--YRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPE 118
BLAST of FC875308 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.426e-14 Identity = 36/68 (52.94%), Postives = 40/68 (58.82%), Query Frame = 1 Query: 469 RKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKGYFPDETPAAA 672 RK YRG+RQRPWGKWAAEIRDP K RVWLGTF T +G KAK FP+ A+ Sbjct: 88 RKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPERAQLAS 155 The following BLAST results are available for this feature:
BLAST of FC875308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875308 ID=FC875308; Name=FC875308; organism=Citrus clementina; type=EST; length=674bpback to top |