FC875327
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875327 vs. ExPASy Swiss-Prot
Match: BH051_ARATH (Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.061e-24 Identity = 64/130 (49.23%), Postives = 80/130 (61.54%), Query Frame = 1 Query: 253 DRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEVSKTLTIPTEVDEVTVECELFQAAEARAETEAGSSINKVKGDTLIKASVSCDDQPELYKEIIRVLKGLGL 642 ++A ++S+SH AEKRRRDRIN+ L LRKL+P S+K+DKAALL + IE VK+LK KA E +PTE DEVTV+ E E+ T + KAS C+DQPE EIIRVL L L Sbjct: 58 EKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAESPIFQDLPTEADEVTVQPETISDFESNTNT------------IIFKASFCCEDQPEAISEIIRVLTKLQL 175
BLAST of FC875327 vs. ExPASy Swiss-Prot
Match: BH032_ARATH (Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.886e-23 Identity = 56/135 (41.48%), Postives = 84/135 (62.22%), Query Frame = 1 Query: 238 QEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEVSKTLTIPTEVDEVTVECELFQAAEARAETEAGSSINKVKGDTLIKASVSCDDQPELYKEIIRVLKGLGL 642 QEV + +A A SKSHS+AE+RRR+RIN LA LR ++P + K DKA+LL I+H+K+LK + +++ T +PTE D++TV+ SS N +G+ +I+AS C D+ +L ++I LK L L Sbjct: 122 QEVMDAKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHMKELKRQTSQITDTYQVPTECDDLTVD----------------SSYNDEEGNLVIRASFCCQDRTDLMHDVINALKSLRL 240
BLAST of FC875327 vs. ExPASy Swiss-Prot
Match: BH030_ARATH (Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.611e-22 Identity = 58/135 (42.96%), Postives = 84/135 (62.22%), Query Frame = 1 Query: 238 QEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEVSKTLTIPTEVDEVTVECELFQAAEARAETEAGSSINKVKGDTLIKASVSCDDQPELYKEIIRVLKGLGL 642 QE+ + +A A SKSHS+AE+RRR+RIN LA LR ++P + K DKA+LL I+HVK+LK + +S+T +PTE DE+TV E E G G +IKAS+ C+D+ +L ++I+ LK + L Sbjct: 164 QEIMDAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSVISETNLVPTESDELTV--------AFTEEEETGD------GRFVIKASLCCEDRSDLLPDMIKTLKAMRL 284
BLAST of FC875327 vs. ExPASy Swiss-Prot
Match: BH107_ARATH (Putative transcription factor bHLH107 OS=Arabidopsis thaliana GN=BHLH107 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.982e-15 Identity = 49/138 (35.51%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 244 VAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEVSKTLTIPTEVDEVTV----ECELFQAAEARAETEAGSSINKVKGD---TLIKASVSCDDQPELYKEIIRVLKGL 636 V ED+A A ++H +AE++RR RIN+ L LRKL+ + K DK+ LL ++ VK+LK + +E++ TIP+E DE++V +C +GD + K S C+D+PEL K+++ LK L Sbjct: 37 VYEDKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQTLEITDE-TIPSETDEISVLNIEDCS--------------------RGDDRRIIFKVSFCCEDRPELLKDLMETLKSL 153
BLAST of FC875327 vs. ExPASy Swiss-Prot
Match: BH106_ARATH (Transcription factor bHLH106 OS=Arabidopsis thaliana GN=BHLH106 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.982e-15 Identity = 46/142 (32.39%), Postives = 81/142 (57.04%), Query Frame = 1 Query: 223 INPMTQEVAEDRATAVSKSHSQAEKRRRDRINAQLATLRKLIPKSEKMDKAALLGSAIEHVKDLKLKAMEVSKT--LTIPTEVDEVTVECELFQAAEARAETEAGSSINKVKGDTLIKASVSCDDQPELYKEIIRVLKGLGL 642 I+ + + +A+DRA A ++H +AE+RRR+RIN+ L LR ++ + K DKA LL ++ V++LK + +E S + +P+E DE++V G N G + KAS+ C+D+ +L +++ +LK L + Sbjct: 52 ISGIGETMAQDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQTLETSDSDQTLLPSETDEISV-------------LHFGDYSN--DGHIIFKASLCCEDRSDLLPDLMEILKSLNM 178 The following BLAST results are available for this feature:
BLAST of FC875327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875327 ID=FC875327; Name=FC875327; organism=Citrus clementina; type=EST; length=663bpback to top |