FC875332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.569e-40 Identity = 73/123 (59.35%), Postives = 92/123 (74.80%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 371 G DLLNNPDL+AT+ V+SFKSAIWFWMT Q PKPSCH+VI W+PS D A R+PG+G+ TNIINGG+ECG+G + V++RIGF+ +CG G+ PGDNLDC NQR +G L+ +M Sbjct: 200 GVDLLNNPDLVATDS----VISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTM 318
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 5.968e-40 Identity = 73/123 (59.35%), Postives = 93/123 (75.61%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 371 G++LLNNPDL+ATN V+SFKSAIWFWMTAQ PKPSCH+VI W PSA D A RLPGYG+ TNIINGG+ECG+G + V++RIGF+ +C G+ PGDN+DC NQ+ + L+ ++M Sbjct: 216 GQNLLNNPDLVATN----AVVSFKSAIWFWMTAQSPKPSCHDVITGRWTPSAADRAANRLPGYGVITNIINGGLECGHGSDARVQDRIGFYRRYCSILGVSPGDNIDCGNQKSFNSGLLLETM 334
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 5.968e-40 Identity = 74/123 (60.16%), Postives = 92/123 (74.80%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 371 G DLLNNPDL+AT+ V+SFKSA+WFWMT Q PKPSCH+VII W+PSA D A RLPG+G+ TNIINGG+ECG G + V++RIGF+ +C G+ PGDNLDC NQR +G L+ +M Sbjct: 211 GVDLLNNPDLVATDP----VISFKSALWFWMTPQSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 329
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 7.794e-40 Identity = 71/123 (57.72%), Postives = 92/123 (74.80%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 371 G DLLNNPDL+AT+ ++SFKSAIWFWMT Q PKPSCH+VI W+PS D A R+PG+G+ TNIINGG+ECG+G + V++RIGF+ +CG G+ PGDNLDC NQR +G L+ ++ Sbjct: 198 GVDLLNNPDLVATDS----IISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTV 316
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.018e-39 Identity = 72/123 (58.54%), Postives = 92/123 (74.80%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 371 G DLLNNPDL+AT+ V+SFKSAIWFWMT Q PKPSCH+VI W+PS D A R+PG+G+ TNIINGG+ECG+G + V++RIGF+ +CG G+ PGDNLDC NQR +G L+ ++ Sbjct: 200 GVDLLNNPDLVATDS----VISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTV 318
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.268e-39 Identity = 73/123 (59.35%), Postives = 92/123 (74.80%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 371 G DLLNNPDL+AT+ V+SFKSA+WFWMT Q PKPSCH+VII W+PS+ D A RLPG+G+ TNIINGG+ECG G + V++RIGF+ +C G+ PGDNLDC NQR +G L+ +M Sbjct: 206 GVDLLNNPDLVATDP----VISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 324
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.962e-39 Identity = 72/123 (58.54%), Postives = 91/123 (73.98%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 371 G DLLNNPDL+AT+ V+SFKSAIWFWMT Q PKPSCH+VI W+PS D A R+PG+G+ TNIINGG+ECG+G + V++RIGF+ +CG G+ PG+NLDC NQR +G L+ M Sbjct: 204 GVDLLNNPDLVATDP----VISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGENLDCGNQRSFGNGLLVDIM 322
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.470e-38 Identity = 71/120 (59.17%), Postives = 91/120 (75.83%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMA 362 GEDLLNNP+L+A++ V+SFK+A+WFWMT Q PKPSCH+VI +W PS+ D+ AGR+PGYG+ TNIINGG+ECG+G +D V NRIGF+ +C GI G NLDC +QRP+ L A Sbjct: 217 GEDLLNNPELVASDP----VVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDCYDQRPFNSGLTA 332
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 5.586e-38 Identity = 74/123 (60.16%), Postives = 91/123 (73.98%), Query Frame = 3 Query: 3 GEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 371 G DLLNNPDL+AT+ V+SFK+A+WFWMT Q PKPSCH+VI W PS+ D AGRLPGYG TNIINGG+ECG G + V++RIGF+ +C FGI GDNLDC +QRP+G +L S+ Sbjct: 198 GVDLLNNPDLVATDP----VISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFYKRYCDIFGIGYGDNLDCYSQRPFGSSLPLSSI 316
BLAST of FC875332 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.295e-38 Identity = 69/113 (61.06%), Postives = 87/113 (76.99%), Query Frame = 3 Query: 9 DLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 347 +LL NPDL+AT+ RVLSFK+A+WFWMT Q PKPSCH+V+ W+PSA D AGRLPGYG+ TN++NGG+ECG G N V +R+GFF +CG G+ G+NLDC NQRP+G Sbjct: 135 NLLGNPDLVATD----RVLSFKTALWFWMTPQAPKPSCHDVLTGRWQPSAADTAAGRLPGYGVLTNLLNGGLECGKGPNPQVADRLGFFRRYCGLLGVGTGNNLDCYNQRPFG 243 The following BLAST results are available for this feature:
BLAST of FC875332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 48
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875332 ID=FC875332; Name=FC875332; organism=Citrus clementina; type=EST; length=666bpback to top |