FC875418
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875418 vs. ExPASy Swiss-Prot
Match: GRP1_DAUCA (Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.846e-18 Identity = 44/48 (91.67%), Postives = 47/48 (97.92%), Query Frame = 3 Query: 456 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMDGQNLDGRNITVNEAQ 599 +IINDRETGRSRGFGFVTF+DEKSMRDAIEGM+GQ LDGRNITVNEAQ Sbjct: 36 KIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQ 83
BLAST of FC875418 vs. ExPASy Swiss-Prot
Match: GRP2_SINAL (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.197e-17 Identity = 42/48 (87.50%), Postives = 48/48 (100.00%), Query Frame = 3 Query: 456 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMDGQNLDGRNITVNEAQ 599 +IINDRETGRSRGFGFVTF+DEKSM+DAIEGM+GQ+LDGR+ITVNEAQ Sbjct: 38 KIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of FC875418 vs. ExPASy Swiss-Prot
Match: GRP1_SINAL (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.197e-17 Identity = 42/48 (87.50%), Postives = 48/48 (100.00%), Query Frame = 3 Query: 456 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMDGQNLDGRNITVNEAQ 599 +IINDRETGRSRGFGFVTF+DEKSM+DAIEGM+GQ+LDGR+ITVNEAQ Sbjct: 38 KIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of FC875418 vs. ExPASy Swiss-Prot
Match: GRP7_ARATH (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=GRP7 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.666e-17 Identity = 41/48 (85.42%), Postives = 48/48 (100.00%), Query Frame = 3 Query: 456 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMDGQNLDGRNITVNEAQ 599 +IINDRETGRSRGFGFVTF+DEK+M+DAIEGM+GQ+LDGR+ITVNEAQ Sbjct: 38 KIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of FC875418 vs. ExPASy Swiss-Prot
Match: GRP10_BRANA (Glycine-rich RNA-binding protein 10 OS=Brassica napus GN=GRP10 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.120e-15 Identity = 39/48 (81.25%), Postives = 45/48 (93.75%), Query Frame = 3 Query: 456 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMDGQNLDGRNITVNEAQ 599 +IINDRETGRSRGFGFVTF+DEKSM+DAI+ M+G+ LDGR ITVNEAQ Sbjct: 36 KIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVNEAQ 83
BLAST of FC875418 vs. ExPASy Swiss-Prot
Match: GRP8_ARATH (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=GRP8 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.259e-15 Identity = 39/48 (81.25%), Postives = 45/48 (93.75%), Query Frame = 3 Query: 456 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMDGQNLDGRNITVNEAQ 599 +IINDRE+GRSRGFGFVTF+DEK+MRDAIE M+G+ LDGR ITVNEAQ Sbjct: 36 KIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQ 83
BLAST of FC875418 vs. ExPASy Swiss-Prot
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.758e-14 Identity = 37/48 (77.08%), Postives = 43/48 (89.58%), Query Frame = 3 Query: 456 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMDGQNLDGRNITVNEAQ 599 +II DRETGRSRGFGFVTF +++MR AIE M+GQ+LDGRNITVNEAQ Sbjct: 36 KIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQ 83
BLAST of FC875418 vs. ExPASy Swiss-Prot
Match: GRP2_SORBI (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.026e-14 Identity = 36/48 (75.00%), Postives = 42/48 (87.50%), Query Frame = 3 Query: 456 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMDGQNLDGRNITVNEAQ 599 ++I DRETGRSRGFGFVTF E+SM DAIE M+G+ LDGRNITVN+AQ Sbjct: 38 KVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQ 85
BLAST of FC875418 vs. ExPASy Swiss-Prot
Match: GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.048e-13 Identity = 36/48 (75.00%), Postives = 41/48 (85.42%), Query Frame = 3 Query: 456 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMDGQNLDGRNITVNEAQ 599 ++I DRETGRSRGFGFVTF E SM DAIE M+G+ LDGRNITVN+AQ Sbjct: 38 KVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQ 85
BLAST of FC875418 vs. ExPASy Swiss-Prot
Match: GRP1_SORBI (Glycine-rich RNA-binding protein 1 (Fragment) OS=Sorghum bicolor GN=GRP1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.335e-13 Identity = 37/48 (77.08%), Postives = 42/48 (87.50%), Query Frame = 3 Query: 456 QIINDRETGRSRGFGFVTFRDEKSMRDAIEGMDGQNLDGRNITVNEAQ 599 +II DRET RSRGFGFVTF E++MR AIEGM+G+ LDGRNITVNEAQ Sbjct: 17 KIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQ 64 The following BLAST results are available for this feature:
BLAST of FC875418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875418 ID=FC875418; Name=FC875418; organism=Citrus clementina; type=EST; length=695bpback to top |