FC875455
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875455 vs. ExPASy Swiss-Prot
Match: DHBB_BACSU (Isochorismatase OS=Bacillus subtilis GN=dhbB PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.106e-13 Identity = 56/175 (32.00%), Postives = 86/175 (49.14%), Query Frame = 1 Query: 202 PNPKSSVLLVIDMQNHF----SSIAKPILD---NTLATVQLCRRASIPVFFTRHC-HKSPADYGMLGEWWNGDL---VYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFLRGFRVFFSTDATATSDLELHEATLKNLA 693 P+P +VLL+ DMQN+F ++ A P+ + N C + IPV +T ++P D +L ++W L Y+ EL PE D V+ K YSAF T L E + G +++I+ G+ ++ C TA +AF+ + FF DA A LE H+ L+ A Sbjct: 26 PDPNRAVLLIHDMQNYFVDAFTAGASPVTELSANIRKLKNQCVQLGIPVVYTAQPGSQNPDDRALLTDFWGPGLNSGPYEEKIITELAPE------DDDLVLTKWRYSAFKRTNLLEMMRKEGRDQLIITGIYAHIGCLVTACEAFMEDIKAFFVGDAVADFSLEKHQMALEYAA 194
BLAST of FC875455 vs. ExPASy Swiss-Prot
Match: ENTB_SHIFL (Isochorismatase OS=Shigella flexneri GN=entB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.463e-13 Identity = 53/171 (30.99%), Postives = 86/171 (50.29%), Query Frame = 1 Query: 208 PKSSVLLVIDMQNHFSS-------IAKPILDNTLATVQLCRRASIPVFFTRHC-HKSPADYGMLGEWWNGDLVYDGTADAELLPEIKGLVAGADE-VIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFLRGFRVFFSTDATATSDLELHEATLKNLA 693 P+ + LL+ DMQ++F S + + ++ N A C++ +IPV++T +S D +L + W L T E + L AD+ V+ K YSAF + L++ L G ++I+ GV ++ C TTA DAF+R + F DA A + H +LK +A Sbjct: 28 PQRAALLIHDMQDYFVSFWGENCPMMEQVIANIAALRDYCKQHNIPVYYTAQPKEQSDEDRALLNDMWGPGL----TRSPEQQKVVDRLTPDADDTVLVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTTATDAFMRDIKPFMVADALADFSRDEHLMSLKYVA 194
BLAST of FC875455 vs. ExPASy Swiss-Prot
Match: ENTB_ECOLI (Isochorismatase OS=Escherichia coli (strain K12) GN=entB PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.463e-13 Identity = 53/171 (30.99%), Postives = 86/171 (50.29%), Query Frame = 1 Query: 208 PKSSVLLVIDMQNHFSS-------IAKPILDNTLATVQLCRRASIPVFFTRHC-HKSPADYGMLGEWWNGDLVYDGTADAELLPEIKGLVAGADE-VIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFLRGFRVFFSTDATATSDLELHEATLKNLA 693 P+ + LL+ DMQ++F S + + ++ N A C++ +IPV++T +S D +L + W L T E + L AD+ V+ K YSAF + L++ L G ++I+ GV ++ C TTA DAF+R + F DA A + H +LK +A Sbjct: 28 PQRAALLIHDMQDYFVSFWGENCPMMEQVIANIAALRDYCKQHNIPVYYTAQPKEQSDEDRALLNDMWGPGL----TRSPEQQKVVDRLTPDADDTVLVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTTATDAFMRDIKPFMVADALADFSRDEHLMSLKYVA 194
BLAST of FC875455 vs. ExPASy Swiss-Prot
Match: ENTB_ECO57 (Isochorismatase OS=Escherichia coli O157:H7 GN=entB PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.463e-13 Identity = 53/171 (30.99%), Postives = 86/171 (50.29%), Query Frame = 1 Query: 208 PKSSVLLVIDMQNHFSS-------IAKPILDNTLATVQLCRRASIPVFFTRHC-HKSPADYGMLGEWWNGDLVYDGTADAELLPEIKGLVAGADE-VIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFLRGFRVFFSTDATATSDLELHEATLKNLA 693 P+ + LL+ DMQ++F S + + ++ N A C++ +IPV++T +S D +L + W L T E + L AD+ V+ K YSAF + L++ L G ++I+ GV ++ C TTA DAF+R + F DA A + H +LK +A Sbjct: 28 PQRAALLIHDMQDYFVSFWGENCPMMEQVIANIAALRDYCKQHNIPVYYTAQPKEQSDEDRALLNDMWGPGL----TRSPEQQKVVDRLTPDADDTVLVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTTATDAFMRDIKPFMVADALADFSRDEHLMSLKYVA 194 The following BLAST results are available for this feature:
BLAST of FC875455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875455 ID=FC875455; Name=FC875455; organism=Citrus clementina; type=EST; length=717bpback to top |