FC875460
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875460 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.279e-23 Identity = 69/177 (38.98%), Postives = 96/177 (54.24%), Query Frame = 2 Query: 2 DDGFEALLWLRSLSLAQAQARENNWLTEHVDFQ-RVFLIGDSSGGNVVHEVAARAGDADLSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGPAASPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVNPGMGHSFYL 529 DDG+ L W+ S S WL D + R+FL GDSSGGN+VH VA RA + S + V G I ++P F ER++SE +T+ D + LP D+ HP P GP + ++GL P L+ VAG DLI+D +++Y E +KKAG++V+LL FYL Sbjct: 158 DDGWAVLKWVNSSS----------WLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVE---SRIDVLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYWRAFLPEGEDREHPACSPFGPRSKSLEGLSFPKSLVVVAGLDLIQDWQLKYAEGLKKAGQEVKLLYLEQATIGFYL 321
BLAST of FC875460 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.799e-21 Identity = 65/177 (36.72%), Postives = 93/177 (52.54%), Query Frame = 2 Query: 2 DDGFEALLWLRSLSLAQAQARENNWLTEHVDFQ-RVFLIGDSSGGNVVHEVAARAGDADLSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGPAASPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVNPGMGHSFYL 529 DDG+ AL W+ S S WL D + +FL GDSSGGN+ H VA RAG++ + V G I ++P F ER++SE +T+ D + LP D+ HP P P ++G+ P L+ VAG DLI+D ++ Y E +KKAG++V+L+ FYL Sbjct: 160 DDGWIALNWVNSRS----------WLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGID---VLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLMHLEKATVGFYL 323
BLAST of FC875460 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20 Identity = 60/165 (36.36%), Postives = 87/165 (52.73%), Query Frame = 2 Query: 2 DDGFEALLWLRSLSLAQAQARENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGDADLSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGPAASPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELL 496 DDG+ AL W++S Q+ N + V+L GDSSGGN+ H VA RA + + +V G I +HP F QER++SE +T+ D + LP D+ HP P GP + G+ P L+ VAG DL++D ++ Y + +KK G +V LL Sbjct: 160 DDGWNALNWVKSRVWLQSGKDSNVY---------VYLAGDSSGGNIAHNVAVRATNEGV---KVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNPFGPRGQSLKGVNFPKSLVVVAGLDLVQDWQLAYVDGLKKTGLEVNLL 312
BLAST of FC875460 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.742e-16 Identity = 58/176 (32.95%), Postives = 86/176 (48.86%), Query Frame = 2 Query: 2 DDGFEALLWLRSLSLAQAQARENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARAGDADLSPLRVAGAIPIHPGFLRQERSKSELENPQSPLLTLDMVDKFLSFALPLNSDKGHPYTCPMGPAASPIDGLKLPPFLLCVAGNDLIKDTEMEYYEAMKKAGKDVELLVNPGMGHSFYL 529 DDG+ AL W+ S ++ RVFL GDSSGGN+ H VA RA D + +V G I ++ F ER++SE +TL D + LP ++D+ HP P GP + GL L+ V+G DL D ++ Y +A+++ G V+++ FYL Sbjct: 167 DDGWTALKWVMSQPFMRSGGDAQ---------ARVFLSGDSSGGNIAHHVAVRAADEGV---KVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALREDGHHVKVVQCENATVGFYL 330 The following BLAST results are available for this feature:
BLAST of FC875460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875460 ID=FC875460; Name=FC875460; organism=Citrus clementina; type=EST; length=697bpback to top |