FC875469
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: SEC22_ARATH (25.3 kDa vesicle transport protein OS=Arabidopsis thaliana GN=SEC22 PE=2 SV=1) HSP 1 Score: 368.622 bits (945), Expect = 1.868e-101 Identity = 183/193 (94.82%), Postives = 189/193 (97.93%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGLDDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKGKDLNRQAL 723 MVKMT+IARVTDGLPLAEGLDDGRDL D++MYKQQVKALFKNLSRGQN+ASRMS+ETGPYVFHYIIEGRVCYLTMCDR+YPKKLAFQYLEDLKNEFERVNG IETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADK KDLNRQAL Sbjct: 1 MVKMTLIARVTDGLPLAEGLDDGRDLPDSDMYKQQVKALFKNLSRGQNDASRMSVETGPYVFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDLNRQAL 193
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: SC22B_RAT (Vesicle-trafficking protein SEC22b OS=Rattus norvegicus GN=Sec22b PE=1 SV=3) HSP 1 Score: 186.808 bits (473), Expect = 1.007e-46 Identity = 94/193 (48.70%), Postives = 132/193 (68.39%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKGKDLNRQA 720 MV +TMIARV DGLPLA + +D + RD + Y+ Q K LF+ L+ + +R ++E G FHYIIE VCYL +C+ A+PKKLAF YLEDL +EF+ +G ++ T +RPY+FI+FDTFIQKTKKLY D+R +RN+ +N EL +V +IM N++EVL GE L + ++ L+S S+ Y K LN ++ Sbjct: 1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYLNMRS 191
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: SC22B_PONAB (Vesicle-trafficking protein SEC22b OS=Pongo abelii GN=SEC22B PE=2 SV=3) HSP 1 Score: 186.808 bits (473), Expect = 1.007e-46 Identity = 94/193 (48.70%), Postives = 132/193 (68.39%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKGKDLNRQA 720 MV +TMIARV DGLPLA + +D + RD + Y+ Q K LF+ L+ + +R ++E G FHYIIE VCYL +C+ A+PKKLAF YLEDL +EF+ +G ++ T +RPY+FI+FDTFIQKTKKLY D+R +RN+ +N EL +V +IM N++EVL GE L + ++ L+S S+ Y K LN ++ Sbjct: 1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYLNMRS 191
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: SC22B_MOUSE (Vesicle-trafficking protein SEC22b OS=Mus musculus GN=Sec22b PE=1 SV=3) HSP 1 Score: 186.808 bits (473), Expect = 1.007e-46 Identity = 94/193 (48.70%), Postives = 132/193 (68.39%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKGKDLNRQA 720 MV +TMIARV DGLPLA + +D + RD + Y+ Q K LF+ L+ + +R ++E G FHYIIE VCYL +C+ A+PKKLAF YLEDL +EF+ +G ++ T +RPY+FI+FDTFIQKTKKLY D+R +RN+ +N EL +V +IM N++EVL GE L + ++ L+S S+ Y K LN ++ Sbjct: 1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYLNMRS 191
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: SC22B_HUMAN (Vesicle-trafficking protein SEC22b OS=Homo sapiens GN=SEC22B PE=1 SV=3) HSP 1 Score: 186.808 bits (473), Expect = 1.007e-46 Identity = 94/193 (48.70%), Postives = 132/193 (68.39%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKGKDLNRQA 720 MV +TMIARV DGLPLA + +D + RD + Y+ Q K LF+ L+ + +R ++E G FHYIIE VCYL +C+ A+PKKLAF YLEDL +EF+ +G ++ T +RPY+FI+FDTFIQKTKKLY D+R +RN+ +N EL +V +IM N++EVL GE L + ++ L+S S+ Y K LN ++ Sbjct: 1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYLNMRS 191
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: SC22B_CHICK (Vesicle-trafficking protein SEC22b OS=Gallus gallus GN=SEC22B PE=2 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.315e-46 Identity = 93/193 (48.19%), Postives = 133/193 (68.91%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKGKDLNRQA 720 MV +TMIARV DGLPLA + +D + RD + Y+ Q K LF+ L+ + +R ++E G FHYIIE VCYL +C+ A+PKKLAF YLEDL++EF+ +G ++ T +RPY+FI+FDT+IQKTKKLY D+R +RN+ +N EL +V +IM N++EVL GE L + ++ L+S S+ Y K LN ++ Sbjct: 1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLEAGAMAFHYIIEKGVCYLVLCEAAFPKKLAFAYLEDLQSEFDEQHGKKVPTVSRPYSFIEFDTYIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYLNMRS 191
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: SC22B_CRIGR (Vesicle-trafficking protein SEC22b OS=Cricetulus griseus GN=Sec22b PE=1 SV=3) HSP 1 Score: 184.111 bits (466), Expect = 6.526e-46 Identity = 93/193 (48.19%), Postives = 131/193 (67.88%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKGKDLNRQA 720 MV +TMIARV DGLPLA + +D + RD + Y+ Q K LF+ L+ + +R ++ G FHYIIE VCYL +C+ A+PKKLAF YLEDL +EF+ +G ++ T +RPY+FI+FDTFIQKTKKLY D+R +RN+ +N EL +V +IM N++EVL GE L + ++ L+S S+ Y K LN ++ Sbjct: 1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLN--EQSPTRCTLGAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYLNMRS 191
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: S22BB_DANRE (Vesicle-trafficking protein SEC22b-B OS=Danio rerio GN=sec22bb PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.231e-44 Identity = 89/193 (46.11%), Postives = 129/193 (66.84%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGLDDGRDL-RDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKGKDLNRQA 720 MV +TMIAR+ DGLPLA + + + RD + Y+ Q K LF+ L+ + +R ++E G FHY+IE VCYL +C+ +PKKLAF YLEDL+ EF +G ++ T +RPY+FI+FDT+IQKTKK Y D+R +RN++ +N EL +V +IM N++EVL GE L + +S L+S S+ Y K LN ++ Sbjct: 1 MVLLTMIARLADGLPLAASMQEDEQMGRDLQQYQSQAKQLFRKLN--EQSPNRCTLEAGSMSFHYVIEKGVCYLVLCEAGFPKKLAFAYLEDLQAEFHEQHGKKVPTVSRPYSFIEFDTYIQKTKKSYIDSRARRNLSNINTELQDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKYRSDAKYLNTRS 191
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: SC22B_XENTR (Vesicle-trafficking protein SEC22b OS=Xenopus tropicalis GN=sec22b PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.099e-44 Identity = 90/193 (46.63%), Postives = 131/193 (67.88%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKGKDLNRQA 720 MV +TMIARV DGLPLA + +D + RD + Y+ Q K LF+ L+ + +R ++E G FHY+IE VCYL +C+ A+PKKLAF YLEDL +EF+ +G ++ T +RPY+FI+FD +IQKTKK Y D+R +RN++ +N EL +V +IM N++EVL GE L + +S L++ S+ Y K LN ++ Sbjct: 1 MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQNQAKQLFRKLN--EQSPTRCTLEAGAMTFHYLIEKGVCYLVLCEAAFPKKLAFAYLEDLFSEFDEQHGKKVPTVSRPYSFIEFDNYIQKTKKSYIDSRARRNLSSVNTELQDVQRIMVANIEEVLLRGEALSALDSKASNLSTLSKKYRQDAKYLNMRS 191
BLAST of FC875469 vs. ExPASy Swiss-Prot
Match: S22BA_DANRE (Vesicle-trafficking protein SEC22b-A OS=Danio rerio GN=sec22ba PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.377e-42 Identity = 87/193 (45.08%), Postives = 125/193 (64.77%), Query Frame = 1 Query: 145 MVKMTMIARVTDGLPLAEGL-DDGRDLRDAEMYKQQVKALFKNLSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKGKDLNRQA 720 MV TMI RV D LPLA + +D + RD + Y+ Q K L + L+ + +R ++E G FHY+IE VCYL +C+ +PKKLAF YLEDL+ EF GA++ + +RPY+FI+FDT+IQKT K Y D+R +RN+ +N EL++V +IM N++EVL GE L + +S L+S S+ Y K LN ++ Sbjct: 1 MVLQTMIVRVADSLPLAASMQEDEQSGRDLQKYQSQAKQLCRKLN--EQSPARCTLEAGKMCFHYVIEKGVCYLALCEAGFPKKLAFAYLEDLEGEFSEQYGAKVPSVSRPYSFIEFDTYIQKTIKSYIDSRARRNLGNINSELHDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKYRSDAKYLNTRS 191 The following BLAST results are available for this feature:
BLAST of FC875469 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875469 ID=FC875469; Name=FC875469; organism=Citrus clementina; type=EST; length=723bpback to top |