FC875535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875535 vs. ExPASy Swiss-Prot
Match: TIF3B_ARATH (Protein TIFY 3B OS=Arabidopsis thaliana GN=TIFY3B PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.820e-30 Identity = 77/166 (46.39%), Postives = 104/166 (62.65%), Query Frame = 3 Query: 216 VAQNDAGSAAGLDLSGNEVFNNTIRATAIPTSGVNATDLAPTQLTIFYGGKVCVFDAIPADKVREIMLIAASSATVTNTSDMKKDDTNCPASSPVLTRSPSLQSTASALASPRAQSYPVQRNLLCKLQAELPMARRHSLQRFFEKRRDRPVSKNPYPVQSEAKASD 713 VA D G+A E N +R+T I T+ + P QLTIF+GG V VFD +P++KV+EI+ IAA + N++ + P SSP L R+PS ST++ +ASP AQ +P+Q C+ A+LP+ARRHSLQRF EKRRDR V+KNPYP S+ K +D Sbjct: 18 VADGDGGAAEIGGTGSVEKSINEVRSTEIQTA---EPTVPPNQLTIFFGGSVTVFDGLPSEKVQEILRIAAKAMETKNSTSIS------PVSSPALNRAPSFSSTSN-VASPAAQPFPIQPISFCRSTADLPIARRHSLQRFLEKRRDRLVNKNPYPT-SDFKKTD 172
BLAST of FC875535 vs. ExPASy Swiss-Prot
Match: TIF3A_ARATH (Protein TIFY 3A OS=Arabidopsis thaliana GN=TIFY3A PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.321e-14 Identity = 56/130 (43.08%), Postives = 72/130 (55.38%), Query Frame = 3 Query: 330 LAPTQLTIFYGGKVCVFDAIPADKVREIMLIAASSATVTNTSDMKKDDTNCPASSPVLTRSPSLQSTASALASPRAQSYPVQRNLLCKLQAELPMARRHSLQRFFEKRRDRPVSKNPY-PVQSEAKASDT 716 + P+QLTI +GG VFD IPA+KV+EI+ IAA+ A T T N + +P L R+ S S AS +A C A++P+ARR SLQRFFEKRR R V PY SEA ++T Sbjct: 127 ILPSQLTIIFGGSFSVFDGIPAEKVQEILHIAAA-AKATET-------INLTSINPALKRAISF-SNASTVA--------------CVSTADVPIARRRSLQRFFEKRRHRFVHTKPYSATTSEADKNET 233
BLAST of FC875535 vs. ExPASy Swiss-Prot
Match: TI10B_ARATH (Protein TIFY 10B OS=Arabidopsis thaliana GN=TIFY10B PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.449e-13 Identity = 49/124 (39.52%), Postives = 68/124 (54.84%), Query Frame = 3 Query: 345 LTIFYGGKVCVFDAIPADKVREIMLIAASSATVTNTSDMKKDDTNCPASSPVLTRSPSLQSTASALASPR--AQSYPVQRNLLCKLQAELPMARRHSLQRFFEKRRDRPVSKNPYPVQSEAKAS 710 LTIFYGG+V VFD A+K +E++ +A + + T + + N A S + S+ + + SP A P+Q N L ELP+ARR SL RF EKR+DR SK PY + A+AS Sbjct: 120 LTIFYGGRVMVFDDFSAEKAKEVIDLANKGSAKSFTCFTAEVNNNHSAYS-----QKEIASSPNPVCSPAKTAAQEPIQPNP-ASLACELPIARRASLHRFLEKRKDRITSKAPYQIDGSAEAS 237
BLAST of FC875535 vs. ExPASy Swiss-Prot
Match: TI11A_ARATH (Protein TIFY 11A OS=Arabidopsis thaliana GN=TIFY11A PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.495e-12 Identity = 47/123 (38.21%), Postives = 64/123 (52.03%), Query Frame = 3 Query: 339 TQLTIFYGGKVCVFDAIPADKVREIMLIAASSATVT--NTSDMKKDDTNCPASSPVLTRSPSLQSTASALASPRAQSYPVQRNLLCKLQAELPMARRHSLQRFFEKRRDRPVSKNPYPVQSEA 701 +QLTIF+GGKV V++ P DK +EIM +A + VT N D+ N SS VL P L + Q ++N + + +ARR SL RFF KR+DR V++ PY V A Sbjct: 97 SQLTIFFGGKVLVYNEFPVDKAKEIMEVAKQAKPVTEINIQTPINDENNNNKSSMVL---PDLNEPTDNNHLTKEQQQQQEQNQIVE-----RIARRASLHRFFAKRKDRAVARAPYQVNQNA 211 The following BLAST results are available for this feature:
BLAST of FC875535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875535 ID=FC875535; Name=FC875535; organism=Citrus clementina; type=EST; length=746bpback to top |