FC875627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2) HSP 1 Score: 324.709 bits (831), Expect = 3.240e-88 Identity = 164/208 (78.85%), Postives = 178/208 (85.58%), Query Frame = 1 Query: 103 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726 +AFG FDDSFSL S +AYLAEFISTLLFVFAGVGSAIA+ K+T+DAALD GLVAIA+CHGFALFVAVAIGANISGGHVNPAVTFGLA+GGQIT++TG+FYWIAQLLGS A FLLK VTGGLAVPTH+ TF LVYTVYATAADPKKGSLGTIAP+AIG IVGANILAAGPFSGGSMNP RSFGPAVA+G+F Sbjct: 4 VAFGSFDDSFSLASLRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGDF 211
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2) HSP 1 Score: 309.686 bits (792), Expect = 1.078e-83 Identity = 158/208 (75.96%), Postives = 171/208 (82.21%), Query Frame = 1 Query: 103 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726 IAFG DSFS+GS KAY+AEFI+TLLFVFAGVGSAIA+NK+TADAALDP+GLVA+A+ H FALFV V+I ANISGGH+NPAVT GLA+GG ITILTG FYWIAQLLGS VA LLK VT GLAVPTH TF LVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNP RSFGPAV +G+F Sbjct: 4 IAFGSIGDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGDF 211
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 309.686 bits (792), Expect = 1.078e-83 Identity = 158/208 (75.96%), Postives = 171/208 (82.21%), Query Frame = 1 Query: 103 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726 IAFG DSFS+GS KAY+AEFI+TLLFVFAGVGSAIA+NK+TADAALDP+GLVA+A+ H FALFV V+I ANISGGH+NPAVT GLA+GG ITILTG FYWIAQLLGS VA LLK VT GLAVPTH TF LVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNP RSFGPAV +G+F Sbjct: 4 IAFGSIGDSFSVGSLKAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVTNGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVAGDF 211
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 308.145 bits (788), Expect = 3.138e-83 Identity = 159/208 (76.44%), Postives = 174/208 (83.65%), Query Frame = 1 Query: 103 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726 IAFGRFDDSFS S KAY+AEFISTL+FVFAGVGSAIA+ K+T A LDP+GLVA+A+CHGF LFVAVAIGANISGGHVNPAVTFGLALGGQITILTG+FYWIAQLLG+IV + L++ T G+A PTH TFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANIL AGPFSGGSMNP RSFGPAVASG++ Sbjct: 5 IAFGRFDDSFSAASLKAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCT-GVATPTHG-LSGVGAFEGVVMEIIVTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILVAGPFSGGSMNPARSFGPAVASGDY 210
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1) HSP 1 Score: 303.138 bits (775), Expect = 1.009e-81 Identity = 153/208 (73.56%), Postives = 170/208 (81.73%), Query Frame = 1 Query: 103 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726 IAFG DSFS+ S KAY+AEFI+TLLFVFAGVGSAIA+NK+T+DAALDP+GLVA+A+ H FALFV V++ AN+SGGH+NPAVT GLA+GG ITILTG+FYWIAQ LGS VA LLK VT GL+VPTH TF LVYTVYATAADPKKGSLG IAPIAIGFIVGANILAAGPFSGGSMNP RSFGPAVASG+F Sbjct: 4 IAFGSIGDSFSVASIKAYVAEFIATLLFVFAGVGSAIAYNKLTSDAALDPAGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLKFVTNGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGSLGVIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGDF 211
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2) HSP 1 Score: 292.352 bits (747), Expect = 1.782e-78 Identity = 149/208 (71.63%), Postives = 165/208 (79.33%), Query Frame = 1 Query: 103 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726 I G DSFS+ S KAYL+EFI+TLLFVFAGVGSA+AF K+T+DAALDP+GLVA+A+ H FALFV V+I ANISGGH+NPAVT GLA+GG IT++TG FYWIAQ LGSIVA LL VT G +VPTH TF LVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNP RSFGPAV SG+F Sbjct: 4 IEIGSVGDSFSVASLKAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDPAGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVACLLLVFVTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDF 211
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2) HSP 1 Score: 290.426 bits (742), Expect = 6.771e-78 Identity = 150/208 (72.12%), Postives = 168/208 (80.77%), Query Frame = 1 Query: 103 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726 +AFG F DS S S KAY+AEFI+TLLFVFAGVGSAIA++++T ALDP+GLVAIAI H FALFV V++ ANISGGH+NPAVTFGLA+GG ITILTGI YW+AQLLG+ VA FLL+ VT G A+PTH TF LVYTVYATAADPKKGSLGTIAP+AIGFIVGANILAAGPFSGGSMNP RSFGPAVA+GNF Sbjct: 4 LAFGSFRDSLSAASLKAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQYVTHGQAIPTHG-VSGISEIEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPMAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNF 210
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 1.155e-77 Identity = 149/207 (71.98%), Postives = 163/207 (78.74%), Query Frame = 1 Query: 103 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGN 723 I G DSFS+ S KAYL+EFI+TLLFVFAGVGSA+AF K+T+D ALDP+GLVAIAI H FALFV V+I ANISGGH+NPAVT GLA+GG IT++TG FYWIAQ LGSIVA LL VT G +VPTH TF LVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNP RSFGPAV SG+ Sbjct: 4 IEVGSVGDSFSVSSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGALDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVACLLLVFVTNGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD 210
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 1.508e-77 Identity = 150/208 (72.12%), Postives = 166/208 (79.81%), Query Frame = 1 Query: 103 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726 +AFG DSFS S KAY+AEFI+TLLFVFAGVGSAIA+ ++T ALDP+GLVAIAI H ALFV V++ ANISGGH+NPAVTFGLA+GG ITILTG+FYWIAQLLG+ +A LLK VT G A+PTH TF LVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNP RSFGPAVA+GNF Sbjct: 4 LAFGSLGDSFSATSVKAYVAEFIATLLFVFAGVGSAIAYGQLTNGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHGKAIPTHG-VAGISELEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNF 210
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 5.732e-77 Identity = 145/208 (69.71%), Postives = 165/208 (79.33%), Query Frame = 1 Query: 103 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726 +AFG DSFS+ S KAY+AEFI+TLLFVFAGVGSAIAF ++T ALDP+GLVAIA+ H ALFV V++ AN SGGH+NPAVTFGLA+GG IT+LTG+FYW+AQLLG+ VA LL+ VT G A+PTH TF LVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNP RSFGPAVA+ +F Sbjct: 4 LAFGSVGDSFSVTSIKAYVAEFIATLLFVFAGVGSAIAFGQLTNGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLRFVTHGKAIPTHGVSGGTTELEGVVFEIVITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAADF 211 The following BLAST results are available for this feature:
BLAST of FC875627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875627 ID=FC875627; Name=FC875627; organism=Citrus clementina; type=EST; length=743bpback to top |