FC875681
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 9.179e-56 Identity = 71/128 (55.47%), Postives = 83/128 (64.84%), Query Frame = 3 Query: 102 GSAGNCG---SGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGE-----CDPDDGTAGDG--GELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 455 GSA CG +CPGG CCS +GWCG T DYC GCQS C+ G+ CD D GDG G L II + F+ LL++RND RCPA FYTY+AFI AAK FP FGN+G++ MRKREIAAF Sbjct: 20 GSAEQCGRQAGDALCPGGLCCSSYGWCGTTVDYCGIGCQSQCDGGGGGDGGDDGCDGGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAF 147 HSP 2 Score: 98.5969 bits (244), Expect = 9.179e-56 Identity = 47/76 (61.84%), Postives = 52/76 (68.42%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDP--NYPC-RGKYY-GRGPIQLSWNYNYLRC 651 K ++ F QT HETTGGWPDAP G YAWGYC+ +E+ YCDP NY C GK Y GRGPIQLSWNYNY C Sbjct: 141 KREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEINC--QPYCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLC 214
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.698e-54 Identity = 66/121 (54.55%), Postives = 80/121 (66.12%), Query Frame = 3 Query: 102 GSAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 455 GSA CG G VCPGG CCS+FGWCG T DYC GCQS C+ G++G++I+R MF D+L++RN+ CP + FYTYDAFI AAKAFP FG +G+ T RKREIAAF Sbjct: 18 GSAEQCGGQAGGRVCPGGACCSKFGWCGNTADYCGSGCQSQCSST---------------GDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAF 123 HSP 2 Score: 93.9745 bits (232), Expect = 1.698e-54 Identity = 47/93 (50.54%), Postives = 58/93 (62.37%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDFL 702 K ++ F AQT HETTGGW AP G YAWGYC+ RE G+ + YC P+ +PC KYYGRGPIQ+S+NYNY + NNPD + Sbjct: 117 KREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGA-YCVPSAQWPCAAGRKYYGRGPIQISYNYNYGQA--GKAIGVDLVNNPDLV 206
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.332e-54 Identity = 66/123 (53.66%), Postives = 82/123 (66.67%), Query Frame = 3 Query: 102 GSAGNCG---SGVVCPGGECCSRFGWCGLTTDYCCE--GCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 455 GSA CG G +CPGG CCS+FGWCG T DYC + GCQS C+ G+ GD G L +I+R+ F+ +L +RND CPAR FYTYDAFI AAK+FPAF +G++ RKRE+AAF Sbjct: 19 GSAEQCGRQAGGALCPGGLCCSQFGWCGNTDDYCKKENGCQSQCS-----------GSGGDTGGLDSLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAF 130 HSP 2 Score: 97.8265 bits (242), Expect = 8.332e-54 Identity = 53/95 (55.79%), Postives = 61/95 (64.21%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGG--WPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDFL 702 K ++ F AQT HETTGG W AP G Y WGYC+NRE+ A DYC DPNYPC GK Y+GRGP+QL+WNYNY +C NNPD L Sbjct: 124 KREVAAFLAQTSHETTGGAGWA-APDGPYTWGYCYNRELNPA--DYCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQC--GRAIGVDLLNNPDLL 213
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.406e-53 Identity = 66/122 (54.10%), Postives = 78/122 (63.93%), Query Frame = 3 Query: 102 GSAGNCG---SGVVCPGGECCSRFGWCGLTTDYCC-EGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 455 GSA CG G +CPGG CCS+FGWCG T DYC GCQS C+ G A G L +ISR+ F +L +RND CPAR FYTYDAFI AA++FPAF +G++ RKREIAAF Sbjct: 20 GSAEQCGRQAGGALCPGGLCCSQFGWCGSTADYCTVPGCQSQCS---------GSGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAF 132 HSP 2 Score: 100.138 bits (248), Expect = 2.406e-53 Identity = 55/95 (57.89%), Postives = 62/95 (65.26%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGG--WPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDFL 702 K ++ F AQT HETTGG W AP G YAWGYC+NRE+ SS YC DPNYPC GK Y+GRGP+QLSWNYNY +C NNPD L Sbjct: 126 KREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSS-YCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQC--GRAIGVDLLNNPDLL 216
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 127.872 bits (320), Expect = 3.136e-53 Identity = 63/122 (51.64%), Postives = 77/122 (63.11%), Query Frame = 3 Query: 105 SAGNCG---SGVVCPGGECCSRFGWCGLTTDYCCE-GCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 458 SA CG G +CP G CCS FGWCG T YC + GCQS +C P G G+L IIS F+D+L++RND CPAR FYTY+AFI AAK+FP FG +G+ RK+E+AAFF Sbjct: 32 SAEQCGRQAGGALCPNGLCCSEFGWCGNTEPYCKQPGCQS--------QCTPGGTPPGPTGDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFF 145 HSP 2 Score: 102.449 bits (254), Expect = 3.136e-53 Identity = 49/93 (52.69%), Postives = 60/93 (64.52%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDFL 702 K+++ FF QT HETTGGW AP G Y+WGYCF +E A SDYC+P+ +PC +YYGRGP+QLSWNYNY C NNPD + Sbjct: 138 KKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPA-SDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLC--GRAIGVDLLNNPDLV 227
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.329e-53 Identity = 62/115 (53.91%), Postives = 76/115 (66.09%), Query Frame = 3 Query: 111 GNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 455 G G +CPGG CCS+FGWCG TTDYC GCQS C G + +L +ISR F+ +L++RND CPA+ FYTYDAFI AAKA+P+FGN+G+ RKREIAAF Sbjct: 31 GRQAGGALCPGGNCCSQFGWCGSTTDYCGPGCQSQCG-----------GPSPAPTDLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAF 134 HSP 2 Score: 95.1301 bits (235), Expect = 5.329e-53 Identity = 41/74 (55.41%), Postives = 49/74 (66.22%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCR--GKYYGRGPIQLSWNYNYLRC 651 K ++ F QT HETTGGW AP G YAWGYCF RE ++ P +PC +YYGRGPIQ+SWNYNY +C Sbjct: 128 KREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSTYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQC 201
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 6.947e-53 Identity = 67/122 (54.92%), Postives = 79/122 (64.75%), Query Frame = 3 Query: 105 SAGNCGS---GVVCPGGECCSRFGWCGLTTDYCCEG-CQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 458 SA CGS G CP G CCS+FGWCG T DYC G CQS C G P T GG+LG IIS MF+ +L++RND C + FY+Y+AFI AA++FP FG SG+ T RKREIAAFF Sbjct: 22 SAEQCGSQAGGARCPSGLCCSKFGWCGNTNDYCGPGNCQSQCP----GGPTPTPPTPPGGGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFF 139 HSP 2 Score: 96.2857 bits (238), Expect = 6.947e-53 Identity = 49/93 (52.69%), Postives = 58/93 (62.37%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCR--GKYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDFL 702 K ++ FFAQT HETTGGW AP G YAWGYC+ RE G + DYC P+ +PC KY+GRGPIQ+S NYNY C NNPD + Sbjct: 132 KREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQG-SPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLV 221
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 6.949e-53 Identity = 64/117 (54.70%), Postives = 75/117 (64.10%), Query Frame = 3 Query: 111 GNCGSGVVCPGGECCSRFGWCGLTTDYCCE-GCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFF 458 G G +CP G CCS FGWCG T YC + GCQS C G P G G+L IISR F+D+L++RND CPAR FYTYDAFI AAK+FP FG +G+ RK+EIAAFF Sbjct: 24 GRQAGGALCPNGLCCSEFGWCGDTEAYCKQPGCQSQC-----GGTPP-----GPTGDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFF 130 HSP 2 Score: 100.523 bits (249), Expect = 6.949e-53 Identity = 48/93 (51.61%), Postives = 59/93 (63.44%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPN--YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDFL 702 K+++ FF QT HETTGGW AP G Y+WGYCF +E SS+YC P+ +PC YYGRGP+QLSWNYNY +C NNPD + Sbjct: 123 KKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQN-PSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQC--GRAIGSDLLNNPDLV 212
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.615e-52 Identity = 61/115 (53.04%), Postives = 76/115 (66.09%), Query Frame = 3 Query: 111 GNCGSGVVCPGGECCSRFGWCGLTTDYCCEGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 455 G G +CPGG CCS+FGWCG TTDYC + CQS C G + +L +ISR F+ +L++RND CPA+ FYTYDAFI AAKA+P+FGN+G+ RKREIAAF Sbjct: 30 GRQAGGALCPGGNCCSQFGWCGSTTDYCGKDCQSQCG-----------GPSPAPTDLSALISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAF 133 HSP 2 Score: 95.1301 bits (235), Expect = 2.615e-52 Identity = 41/74 (55.41%), Postives = 49/74 (66.22%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGGWPDAPGGEYAWGYCFNREVGAASSDYCDPNYPCR--GKYYGRGPIQLSWNYNYLRC 651 K ++ F QT HETTGGW AP G YAWGYCF RE ++ P +PC +YYGRGPIQ+SWNYNY +C Sbjct: 127 KREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQC 200
BLAST of FC875681 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 3.412e-52 Identity = 62/116 (53.45%), Postives = 74/116 (63.79%), Query Frame = 3 Query: 111 GNCGSGVVCPGGECCSRFGWCGLTTDYCC-EGCQSNCNQVVCGECDPDDGTAGDGGELGKIISRKMFEDLLEYRNDKRCPARCFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAF 455 G G +CPGG CCS+FGWCG T DYC GCQS C+ G A G L +ISR+ F +L +RND CPAR FYTYDAFI AA++FPAF +G++ RKREIAAF Sbjct: 4 GRQAGGALCPGGLCCSQFGWCGSTADYCTVPGCQSQCS---------GSGPAPGPGGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAF 110 HSP 2 Score: 100.138 bits (248), Expect = 3.412e-52 Identity = 55/95 (57.89%), Postives = 62/95 (65.26%), Query Frame = 1 Query: 436 KEKLLPFFAQTGHETTGG--WPDAPGGEYAWGYCFNREVGAASSDYC--DPNYPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDFL 702 K ++ F AQT HETTGG W AP G YAWGYC+NRE+ SS YC DPNYPC GK Y+GRGP+QLSWNYNY +C NNPD L Sbjct: 104 KREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSS-YCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQC--GRAIGVDLLNNPDLL 194 The following BLAST results are available for this feature:
BLAST of FC875681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875681 ID=FC875681; Name=FC875681; organism=Citrus clementina; type=EST; length=712bpback to top |