FC875708
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875708 vs. ExPASy Swiss-Prot
Match: BGAL_BACME (Beta-galactosidase OS=Bacillus megaterium GN=bgaM PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.176e-18 Identity = 66/223 (29.60%), Postives = 105/223 (47.09%), Query Frame = 3 Query: 24 EEIFLTVTAKLMNSTRWAEAGHVISTAQVQLPSKRERLPHVIRTGDAIILQENLGNTIQLSHQNSWEIKFDIQTGAVESWKVEGVSVMKRGIFPCFWRAPTDNDKGGGESSYYSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVVYDGTPRVDMSSLTKLEKAKALFEIVIDYTIYGSGNVIVECNFKPNTSDLPPLPRVGVEFHLEQIMDKIKFYGRGPFE 692 +E LT++ +L T WA AG+ ++ Q LP+K +P V A+ + +N T+ ++ N I FD + G S+ E ++ G P FWRA TDND G WR A ++ V K ++Q D FV I V +L +L + YT+Y G + +E + P+ + +P +P +G+ F + D + +YGRGP E Sbjct: 707 DEFVLTLSLRLSKDTAWASAGYEVAYEQFVLPAKAA-MPSVKAAHPALTVDQN-EQTLTVTGTNFTAI-FDKRKGQFISYNYERTELLASGFRPNFWRAVTDNDLGNKLHERCQTWRQASLEQHV---KKVTVQPQVD-FVIISV--------------ELALDNSLASCYVTYTLYNDGEMKIEQSLAPSET-MPEIPEIGMLFTMNAAFDSLTWYGRGPHE 907
BLAST of FC875708 vs. ExPASy Swiss-Prot
Match: BGAL_THEMA (Beta-galactosidase OS=Thermotoga maritima GN=lacZ PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.129e-15 Identity = 59/222 (26.58%), Postives = 104/222 (46.85%), Query Frame = 3 Query: 27 EIFLTVTAKLMNSTRWAEAGHVISTAQVQLPSKRERLPHVIRTGDAIILQENLGNTIQLSHQNSWEIKFDIQTGAVESWKVEGVSVMKRGIFPCFWRAPTDNDKGGGESSYYSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVVYDGTPRVDMSSLTKLEKAKALFEIVIDYTIYGSGNVIVECNFKPNTSDLPPLPRVGVEFHLEQIMDKIKFYGRGPFE 692 E FL ++ L T WAE GHV++ Q L + + D + L+E+ G + + +++ + F TG +E ++K + P FWR PTDND G + W+ A + +F +N RV + S+ +L ++ YT++G+G+V+V+ + P D+P +PR+G +F + + +++YGRGP E Sbjct: 662 EYFLEISFSLSEDTPWAEKGHVVAWEQFLLKAPAFEKKSI---SDGVSLRED-GKHLTVEAKDTVYV-FSKLTGLLEQILHRRKKILKSPVVPNFWRVPTDNDIGNRMPQRLAIWKRASKERKLFKMHWKKEEN----------------RVSVHSVFQLPGNSWVY---TTYTVFGNGDVLVDLSLIP-AEDVPEIPRIGFQFTVPEEFGTVEWYGRGPHE 858
BLAST of FC875708 vs. ExPASy Swiss-Prot
Match: BGAL_VIBC3 (Beta-galactosidase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=lacZ PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.292e-15 Identity = 65/214 (30.37%), Postives = 97/214 (45.33%), Query Frame = 3 Query: 72 WAEAGHVISTAQVQLPSKRERLPHVIRTGDAIILQENLGNTIQLSHQNSWEIKFDIQTGAVESWKVEGVSVMKRGIFPCFWRAPTDNDKGGGES------SYYSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVVYDGTPRVDMSSLTKLEKAKALFEIVIDYTIYGSGNVIVECNFKPNT-SDLPPLPRVGVEFHLEQIMDKIKFYGRGPFE 692 W+ AGH I++ Q L +R LP + T + + G+ +++ N + +F+ QTG +E W G V+ + F+RA DND G E+ S+ +RW AAG+D L C VT + VV D + + Y I+G V E N + SDLPPLPRVG+ L + + ++GRGP E Sbjct: 704 WSNAGHCIASEQWCLQPRRSMLPKI--THAPLPQWQQDGDKVRIEAANQ-QWQFNRQTGLLEQWWQNGQPVLSEPLRDNFYRAVLDNDIGTSEAQHLDPNSWIARWHAAGLDKL---RVECDDLRVTTLNESVEVVID---------VAHYHQQALALRTRWRYQIFGDARV--ELNVEVMLCSDLPPLPRVGLTLALPVAENPVSWFGRGPHE 900
BLAST of FC875708 vs. ExPASy Swiss-Prot
Match: BGAL_ALTMD (Beta-galactosidase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=lacZ PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.633e-14 Identity = 67/239 (28.03%), Postives = 110/239 (46.03%), Query Frame = 3 Query: 36 LTVTAKLMNSTRWAEAGHVISTAQVQLPSKRERLPHVIRTGDAIILQENLGNTIQLSHQNSWEI--------KFDIQTGAVESWKVEGVSVMKRGIFPCFWRAPTDNDKGGGE------SSYYSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVVYDGTPRVDMSSLTKLEKAKALFEIVIDYTIYGSGNVIVECNFKPNTSDLPPLPRVGVEFHL------EQIMDKIKFYGRGPFE 692 L + L N WA+AGHVI TAQ+ L +K +P V A + EN + + + +N+ + F+ ++G + SW E ++ + F+RAP DND G E +++ SRWR AGI + S ++ T + V+I +++ + + TK YTI + VE + S LPP+PR+G++ + EQ ++ + G GPFE Sbjct: 699 LNIDVVLANDCAWAKAGHVIDTAQLALANKSGLIPFV---STANVANENAESGVTVKAENTTLLVSVKNNVFSFNSESGLLTSWLHEDSEMLSAPLEDNFFRAPLDNDIGVSEVDNPDPNAWESRWRRAGIGKWDRICTSVDVEQST-FDVRITSLFEYHYNDKLIAATKWV-----------YTINHQAALTVEVEVLLDDS-LPPMPRIGLQAAVPAPRSNEQERMRVTWQGLGPFE 921
BLAST of FC875708 vs. ExPASy Swiss-Prot
Match: BGAL_PSYIN (Beta-galactosidase OS=Psychromonas ingrahamii (strain 37) GN=lacZ PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.803e-13 Identity = 70/236 (29.66%), Postives = 105/236 (44.49%), Query Frame = 3 Query: 27 EIFLTVTAKLMNSTRWAEAGHVISTAQVQLPSKRERLPHVIRTGDAIILQENLGNTIQLSHQNS---WEIKFDIQTGAVESWKVEGVSVMKRGIFPCFWRAPTDNDKGGGE------SSYYSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVVYDGTPRVDMSSLTKLE-----KAKALFEIVIDYTIYGSGNVIVECNFKPNTSDLPPLPRVGVEFHLEQIMDKIKFYGRGPFE 692 + FL + L WA G V++T QV L S + + A L E+ N I ++ S +E++ D Q G + W V G + + +G F+RAP DND G E +++ ++W AGI +LV +I+ VT + S L K+E + K L YTI G V ++ N S L PLPR+G+E L + ++GRGP E Sbjct: 700 DYFLNIEIVLNKDKPWATKGFVVATEQVALASIAQLTNVPLIESGAPRLSEDK-NKITVAGTGSGAEFELEIDKQQGVISQWLVRGENKILQGPKDNFFRAPLDNDIGTSEADCIDPNAWVTQWDTAGIANLV--PHCIAIEAVT---------------LARSVLVKVEFGHYVENKLLISSHWQYTINNQGEVQIDVNVNLAKS-LSPLPRIGLELILPDSEKPVNWFGRGPHE 916
BLAST of FC875708 vs. ExPASy Swiss-Prot
Match: BGAL_VIBVU (Beta-galactosidase OS=Vibrio vulnificus GN=lacZ PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.355e-13 Identity = 64/233 (27.47%), Postives = 106/233 (45.49%), Query Frame = 3 Query: 27 EIFLTVTAKLMNSTRWAEAGHVISTAQVQLPSKRERLPHVIRTGDAIILQENLGNTI---QLSHQNSWEIKFDIQTGAVESWKVEGVSVMKRGIFPCFWRAPTDNDKGGGE------SSYYSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVVYDGTPRVDMSSLTKLEKAKALFEIVIDYTIYGSGNVIVECNFKPNTSDLPPLPRVGVEFH--LEQIMDKIKFYGRGPFE 692 + +L L+ +T WA AGHV++T Q+ L + +RT A L EN G+ I L ++ W ++D Q+G + W V+G + M F+RAP DND G E +++ RW AGI C + + + V + + D+ ++T+ +T+ G ++++ + LPP+PR+G+E L Q I + G GPFE Sbjct: 695 QYYLNTDICLIEATSWAPAGHVVATEQMALRNHAGLAMPTLRTQPAPKLTEN-GHAIVVSSLDEKHQW--RWDSQSGLLMEWNVDGKAQMLAAPQDNFFRAPLDNDIGISEVDNVDPNAWVCRWEMAGIGQWERHCVQCESETLA-HAVVVTTTFAYHFGGDVQAITQW-----------THTLSNDGEMLLDVDV-TLADALPPMPRIGLELQLPLHQADTPITWQGLGPFE 911
BLAST of FC875708 vs. ExPASy Swiss-Prot
Match: BGAL_PSEHA (Beta-galactosidase OS=Pseudoalteromonas haloplanktis GN=lacZ PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 56/236 (23.73%), Postives = 105/236 (44.49%), Query Frame = 3 Query: 27 EIFLTVTAKLMNSTRWAEAGHVISTAQVQL-PSKRERLPHVIRTGDAIILQENLGNTIQLSHQNSWEIKFDIQTGAVESWKVEGVSVMKRGIFPCFWRAPTDNDKGGGE------SSYYSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVV------YDGTPRVDMSSLTKLEKAKALFEIVIDYTIYGSGNVIVECNFKPNTSDLPPLPRVGVEFHLEQIMD-KIKFYGRGPFE 692 + +L + L+N + +A A HV+ + Q +L S + ++ N ++ N++++ F+ Q+G +E W + V+ + F+RAP DND G E +++ +RW AGI ++CS N V +R+ ++G + L YT+ +G + + + N + LPP+PR+G+ + + D K+ + G GPFE Sbjct: 701 QYYLNLDVALINDSHFANANHVMDSEQFKLINSNNLNSKSFASATEKSVISVNETDSHLSIENNTFKLVFNQQSGLIEQWLQDDTQVISSPLVDNFYRAPLDNDIGVSEVDNLDPNAWEARWSRAGIGQ---WQRTCSSINAVQSSVDVRITCVFNYEFNGVLQAQTQWL---------------YTLNNTGTISLNVDVNLNDT-LPPMPRIGLSTTINKQSDTKVNWLGLGPFE 917
BLAST of FC875708 vs. ExPASy Swiss-Prot
Match: BGAL_PHOPR (Beta-galactosidase OS=Photobacterium profundum GN=lacZ PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.401e-12 Identity = 63/225 (28.00%), Postives = 102/225 (45.33%), Query Frame = 3 Query: 54 LMNSTRWAEAGHVISTAQVQLPSKRERLPHVIRTGDAIILQEN----LGNTIQLSHQNSWEIKFDIQTGAVESWKVEGVSVMKRGIFPCFWRAPTDNDKGGGE------SSYYSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVVYDGTPRVDMSSLTKLEKAKALFEIVIDYTIYGSGNVIVECNFKPNTSDLPPLPRVGVEFHLEQIMDK--IKFYGRGPFE 692 L+++T WA+AGHV +T Q L + I A L E L + + HQ W ++++G + SW V+G S + F+RAP DND G E +++ RW AAGI SC+ ++++ VK+ + + ++T V YT+ G + ++ + LPP+PR+G+E L D + + G GPFE Sbjct: 702 LISATPWAQAGHVSATEQFTLSNTSSLTLPKISILSAPQLSEQGRDILVSNLDKKHQWQW----NVESGLLTSWMVDGQSQLLHAPEDNFFRAPLDNDIGVSEIDNIDPNAWVCRWDAAGIGRWERECVSCTSESLSQ-AVKVTSTFAYHHNGGVQAIT-----------VWTYTLDNQGEMHIDVDV-TLADHLPPMPRIGLELALPLPSDNTTVTWQGLGPFE 909
BLAST of FC875708 vs. ExPASy Swiss-Prot
Match: BGAL_VIBVY (Beta-galactosidase OS=Vibrio vulnificus (strain YJ016) GN=lacZ PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.576e-12 Identity = 61/224 (27.23%), Postives = 103/224 (45.98%), Query Frame = 3 Query: 54 LMNSTRWAEAGHVISTAQVQLPSKRERLPHVIRTGDAIILQENLGNTI---QLSHQNSWEIKFDIQTGAVESWKVEGVSVMKRGIFPCFWRAPTDNDKGGGE------SSYYSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVVYDGTPRVDMSSLTKLEKAKALFEIVIDYTIYGSGNVIVECNFKPNTSDLPPLPRVGVEFHLE--QIMDKIKFYGRGPFE 692 L+ +T WA AGHV++T Q+ L + +RT A L ++ G+ I L ++ W ++D Q+G + W V+G + M F+RAP DND G E +++ RW AGI C + + + V + + D+ ++T+ +T+ G ++++ + LPP+PR+G+E L Q I + G GPFE Sbjct: 703 LIEATSWAPAGHVVATEQMALRNHAGLAIPTLRTQPAPKLTQD-GHAIVVSSLDEKHQW--RWDSQSGLLMEWNVDGKAQMLAAPQDNFFRAPLDNDIGISEVDNVDPNAWVCRWEMAGIGQWERHCVHCDSETLA-HTVVVTTTFAYHFGGDVQAITQW-----------THTLSNDGEMLLDVDV-TLADTLPPMPRIGLELQLPLYQADTPITWQGLGPFE 910
BLAST of FC875708 vs. ExPASy Swiss-Prot
Match: BGAL_CLOAB (Beta-galactosidase OS=Clostridium acetobutylicum GN=cbgA PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.292e-11 Identity = 60/224 (26.79%), Postives = 96/224 (42.86%), Query Frame = 3 Query: 24 EEIFLTVTAKLMNSTRWAEAGHVISTAQVQLPSKRERLPHVIRTGDAIILQE-NLGNTIQLSHQNSWEIKFDIQTGAVESWKVEGVSVMKRGIFPCFWRAPTDNDKGGGESSYYSRWRAAGIDSLVFLTKSCSIQNVTDYFVKIRVVYDGTPRVDMSSLTKLEKAKALFEIVIDYTIYGSGNVIVECNFKPNTSDLPPLPRVGVEFHLEQIMDKIKFYGRGPFE 692 EEI LT + +L +T WAE G+ I+ Q + K + H + II + N+G H ++ F Q G + S + + R +WRA TDND+G S+W AA + Q D+ V+ + ++ + +L + + I Y + G G + V +K S LP LP +G++F L + +YG GP E Sbjct: 679 EEIVLTTSLRLAQATLWAEKGYEIAFGQKVIKEKSDMNNHNSESKMKIIHGDVNIG-----VHGKDFKAIFSKQEGGIVSLRYNNKEFITRTPKTFYWRATTDNDRGNRHEFRCSQWLAATMG-----------QKYVDFSVE-----EFDEKITLYYTYQLPTVPST-NVKITYEVSGEGIIKVNVKYK-GVSGLPELPVLGMDFKLLAEFNSFSWYGMGPEE 879 The following BLAST results are available for this feature:
BLAST of FC875708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875708 ID=FC875708; Name=FC875708; organism=Citrus clementina; type=EST; length=699bpback to top |