FC876164
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876164 vs. ExPASy Swiss-Prot
Match: CND2_MOUSE (Condensin complex subunit 2 OS=Mus musculus GN=Ncaph PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.392e-24 Identity = 66/164 (40.24%), Postives = 97/164 (59.15%), Query Frame = 1 Query: 244 QILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVE-TNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHS-----VHREGYSKKDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDESGAKGL 717 QI E + CIKL+SENKI KN + L+LID + EI+K + D E TNF+ A+ TL+A KIY++RVD+VH++ Y+VLGG+ + DT + + +HS + E K KK T+E + +NV + D AVDP++ +T+A FDE G+ Sbjct: 101 QITEHYSTCIKLSSENKITTKNAFGLHLIDFMSEILK---QKDAEPTNFKVAAGTLDASTKIYAVRVDAVHADVYRVLGGLGK-------DTPPQGEESHSGDGSTLETERTKKPAKPKKKQSCKTIEQNLSNINVSEADGKCAVDPMFQKTAASFDECSTTGV 254
BLAST of FC876164 vs. ExPASy Swiss-Prot
Match: CND2_SCHPO (Condensin complex subunit 2 OS=Schizosaccharomyces pombe GN=cnd2 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.818e-24 Identity = 63/157 (40.13%), Postives = 92/157 (58.60%), Query Frame = 1 Query: 247 ILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSVHREGYSKKDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDESGAKGL 717 +L F IKLA++NKIN NTW LID+ ++ + + D+ NFQKASCTL+ VKIY+ R+DSV +E K+L G+ + +Q ED A + + KK+ ++ + TL FE++ KKF+ + DPL+ + A FDE GAKGL Sbjct: 67 VLSNFEEWIKLATDNKINSTNTWNFALIDYFHDMSLLRDGEDI--NFQKASCTLDGCVKIYTSRIDSVATETGKLLSGLANDSKVLQQTEEGED--AENDDEDLQKKKERKRAQRSVKTLVKDFESIRAKKFELECSFDPLFKKMCADFDEDGAKGL 219
BLAST of FC876164 vs. ExPASy Swiss-Prot
Match: CND2_HUMAN (Condensin complex subunit 2 OS=Homo sapiens GN=NCAPH PE=1 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 6.910e-24 Identity = 66/161 (40.99%), Postives = 100/161 (62.11%), Query Frame = 1 Query: 244 QILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVE-TNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINR-AGQENEQDTRVEDKNAHSVHREGYSKKDIEKKLSPL-STLESSFEALNVKKFDAAFAVDPLYHQTSAQFDESGAKGL 717 QI E + CIKL++ENKI KN + L+LID + EI+K + D E TNF+ A+ TL+A KIY++RVD+VH++ Y+VLGG+ + A E + V D +A + G +KK ++ K L T+E + LNV + D +DP++ +T+A FDE G+ Sbjct: 106 QITEHYSTCIKLSTENKITTKNAFGLHLIDFMSEILK---QKDTEPTNFKVAAGTLDASTKIYAVRVDAVHADVYRVLGGLGKDAPSLEEVEGHVADGSATEM---GTTKKAVKPKKKHLHRTIEQNINNLNVSEADRKCEIDPMFQKTAASFDECSTAGV 260
BLAST of FC876164 vs. ExPASy Swiss-Prot
Match: CND2_XENLA (Condensin complex subunit 2 OS=Xenopus laevis GN=ncaph PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.468e-22 Identity = 56/162 (34.57%), Postives = 100/162 (61.73%), Query Frame = 1 Query: 232 LGKDQILELFHNCIKLASENKINQKNTWELNLIDHLCEIIKVEEENDVETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSVHREGYSKKDIEKKLSPLSTLESSFEALNVKKFDAAFAVDPLYHQTSAQFDESGAKGL 717 L QI + + CIKL+ ENKI KN + L+LID++ +I+K ++ TNF+ A+ TL+A KIY++RVD+VH++ YKVLGG+ G+E++ E++ + ++G +K+ +++ T+E + ++N + + +DPL+ + +A FDE G+ Sbjct: 92 LNNTQISDHYSTCIKLSQENKITTKNAFGLHLIDYMGDILKHKDSE--LTNFKVAAGTLDASAKIYAVRVDAVHADVYKVLGGL---GKESQATEDTENQETDTGPQDG--RKNPKRRKCSYKTIERNLNSINRSETERKSEIDPLFQKAAASFDEFSTAGV 246
BLAST of FC876164 vs. ExPASy Swiss-Prot
Match: CND2_YEAST (Condensin complex subunit 2 OS=Saccharomyces cerevisiae GN=BRN1 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.649e-17 Identity = 57/177 (32.20%), Postives = 91/177 (51.41%), Query Frame = 1 Query: 259 FHNCIKLASENKINQKNTWELNLIDHLCEIIKVEE-ENDVETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGINRAGQENEQDTRVEDKNAHSVHREGYSKKDIEKKLSPLSTLESS-----------------------FEALNVKKFDAAFAVDPLYHQTSAQFDESGAKGL 717 F IK+A++NKIN +N+W LID+ ++ +++ EN++ NFQKAS TL+ +KIYS RVDSV +E K+L G+ A ++ + +D N + G + ++ PL+ + S FE + +K+ D +DPL+ + FDE GAK L Sbjct: 31 FEEWIKMATDNKINSRNSWNFALIDYFYDLDVLKDGENNI--NFQKASATLDGCIKIYSSRVDSVTTETGKLLSGL--AQRKTNGASNGDDSNGGNGEGLGGDSDEANIEIDPLTGMPISNDPDVNNTRRRVYNRVLETTLVEFETIKMKELDQELIIDPLFKKALVDFDEGGAKSL 203 The following BLAST results are available for this feature:
BLAST of FC876164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876164 ID=FC876164; Name=FC876164; organism=Citrus clementina; type=EST; length=718bpback to top |